RNA–Protein interactions for RNA: ENST00000619186.4

TP53-224, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,271 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-224	ENST00000619186	ATP4A	P20648	1035 aa		11.63	□□□□□ -0.55
TP53-224	ENST00000619186	ACOT2	P49753	483 aa		11.63	□□□□□ -0.55
TP53-224	ENST00000619186	JAK3	P52333	1124 aa		11.63	□□□□□ -0.55
TP53-224	ENST00000619186	IFI35	P80217	286 aa	Predicted RBP	11.63	□□□□□ -0.55
TP53-224	ENST00000619186	KRT76	Q01546	638 aa		11.63	□□□□□ -0.55
TP53-224	ENST00000619186	CDR2	Q01850	454 aa		11.63	□□□□□ -0.55
TP53-224	ENST00000619186	ANKS1B	Q7Z6G8	1248 aa		11.63	□□□□□ -0.55
TP53-224	ENST00000619186	TADA2B	Q86TJ2	420 aa		11.63	□□□□□ -0.55
TP53-224	ENST00000619186	SLC13A5	Q86YT5	568 aa	Predicted RBP	11.63	□□□□□ -0.55
TP53-224	ENST00000619186	APOBEC3F	Q8IUX4	373 aa	Known RBP	11.63	□□□□□ -0.55
TP53-224	ENST00000619186	ZNF280C	Q8ND82	737 aa		11.63	□□□□□ -0.55
TP53-224	ENST00000619186	PSPC1	Q8WXF1	523 aa	Known RBP	11.63	□□□□□ -0.55
TP53-224	ENST00000619186	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.63	□□□□□ -0.55
TP53-224	ENST00000619186	TCEAL9	Q9UHQ7	104 aa		11.63	□□□□□ -0.55
TP53-224	ENST00000619186	SYNGAP1	Q96PV0	1343 aa		11.63	□□□□□ -0.55
TP53-224	ENST00000619186	TTLL13P	A6NNM8	815 aa		11.63	□□□□□ -0.55
TP53-224	ENST00000619186	MAPK13	O15264	365 aa		11.63	□□□□□ -0.55
TP53-224	ENST00000619186	SPOP	O43791	374 aa		11.63	□□□□□ -0.55
TP53-224	ENST00000619186	GZMA	P12544	262 aa		11.63	□□□□□ -0.55
TP53-224	ENST00000619186	SLCO1A2	P46721	670 aa		11.63	□□□□□ -0.55
TP53-224	ENST00000619186	PMS2	P54278	862 aa		11.63	□□□□□ -0.55
TP53-224	ENST00000619186	MFAP3	P55082	362 aa		11.63	□□□□□ -0.55
TP53-224	ENST00000619186	NLRP11	P59045	1033 aa	Known RBP	11.63	□□□□□ -0.55
TP53-224	ENST00000619186	PRKCE	Q02156	737 aa		11.63	□□□□□ -0.55
TP53-224	ENST00000619186	SNX1	Q13596	522 aa		11.63	□□□□□ -0.55
TP53-224	ENST00000619186	TCEAL1	Q15170	157 aa		11.63	□□□□□ -0.55
TP53-224	ENST00000619186	NLRX1	Q86UT6	975 aa		11.63	□□□□□ -0.55
TP53-224	ENST00000619186	MICALL1	Q8N3F8	863 aa		11.63	□□□□□ -0.55
TP53-224	ENST00000619186	RAPGEF5	Q92565	580 aa		11.63	□□□□□ -0.55
TP53-224	ENST00000619186	TMEM143	Q96AN5	459 aa		11.63	□□□□□ -0.55
TP53-224	ENST00000619186	PWWP2A	Q96N64	755 aa		11.63	□□□□□ -0.55
TP53-224	ENST00000619186	RPS6KC1	Q96S38	1066 aa		11.63	□□□□□ -0.55
TP53-224	ENST00000619186	NTPCR	Q9BSD7	190 aa	Known RBP	11.63	□□□□□ -0.55
TP53-224	ENST00000619186	RAB17	Q9H0T7	212 aa		11.63	□□□□□ -0.55
TP53-224	ENST00000619186	CHST7	Q9NS84	486 aa		11.63	□□□□□ -0.55
TP53-224	ENST00000619186	ANKEF1	Q9NU02	776 aa		11.63	□□□□□ -0.55
TP53-224	ENST00000619186	DIS3	Q9Y2L1	958 aa	Known RBP	11.63	□□□□□ -0.55
TP53-224	ENST00000619186	MROH7	Q68CQ1	1323 aa		11.63	□□□□□ -0.55
TP53-224	ENST00000619186	GOLGA6L10	A0A0M3HER8	536 aa		11.62	□□□□□ -0.55
TP53-224	ENST00000619186	PMM2	O15305	246 aa		11.62	□□□□□ -0.55
TP53-224	ENST00000619186	ZBED4	O75132	1171 aa		11.62	□□□□□ -0.55
TP53-224	ENST00000619186	MTA2	O94776	668 aa		11.62	□□□□□ -0.55
TP53-224	ENST00000619186	RRM1	P23921	792 aa		11.62	□□□□□ -0.55
TP53-224	ENST00000619186	SFN	P31947	248 aa		11.62	□□□□□ -0.55
TP53-224	ENST00000619186	PDE6C	P51160	858 aa		11.62	□□□□□ -0.55
TP53-224	ENST00000619186	SMTN	P53814	917 aa		11.62	□□□□□ -0.55
TP53-224	ENST00000619186	PPP2R2A	P63151	447 aa		11.62	□□□□□ -0.55
TP53-224	ENST00000619186	BYSL	Q13895	437 aa	Known RBP	11.62	□□□□□ -0.55
TP53-224	ENST00000619186	MTERF2	Q49AM1	385 aa		11.62	□□□□□ -0.55
TP53-224	ENST00000619186	ODF2	Q5BJF6	829 aa		11.62	□□□□□ -0.55
TP53-224	ENST00000619186	FBXW10	Q5XX13	1052 aa		11.62	□□□□□ -0.55
TP53-224	ENST00000619186	DCAF15	Q66K64	600 aa		11.62	□□□□□ -0.55
TP53-224	ENST00000619186	PRUNE1	Q86TP1	453 aa		11.62	□□□□□ -0.55
TP53-224	ENST00000619186	PASD1	Q8IV76	773 aa		11.62	□□□□□ -0.55
TP53-224	ENST00000619186	UBL4B	Q8N7F7	174 aa		11.62	□□□□□ -0.55
TP53-224	ENST00000619186	EPS8L3	Q8TE67	593 aa	Known RBP	11.62	□□□□□ -0.55
TP53-224	ENST00000619186	NT5C1B	Q96P26	610 aa		11.62	□□□□□ -0.55
TP53-224	ENST00000619186	POLR3F	Q9H1D9	316 aa	Predicted RBP	11.62	□□□□□ -0.55
TP53-224	ENST00000619186	ADAM7	Q9H2U9	754 aa		11.62	□□□□□ -0.55
TP53-224	ENST00000619186	R3HDML	Q9H3Y0	253 aa		11.62	□□□□□ -0.55
TP53-224	ENST00000619186	A1CF	Q9NQ94	594 aa	Known RBP	11.62	□□□□□ -0.55
TP53-224	ENST00000619186	PICK1	Q9NRD5	415 aa		11.62	□□□□□ -0.55
TP53-224	ENST00000619186	DNAJC17	Q9NVM6	304 aa	Known RBP	11.62	□□□□□ -0.55
TP53-224	ENST00000619186	PCYOX1	Q9UHG3	505 aa		11.62	□□□□□ -0.55
TP53-224	ENST00000619186	SH3BP1	Q9Y3L3	701 aa		11.62	□□□□□ -0.55
TP53-224	ENST00000619186	UMODL1	Q5DID0	1318 aa		11.62	□□□□□ -0.55
TP53-224	ENST00000619186	TLDC2	A0PJX2	215 aa		11.62	□□□□□ -0.55
TP53-224	ENST00000619186	MIF4GD	A9UHW6	222 aa	Known RBP	11.62	□□□□□ -0.55
TP53-224	ENST00000619186	UNG	P13051	313 aa	Predicted RBP	11.62	□□□□□ -0.55
TP53-224	ENST00000619186	ZNF16	P17020	682 aa	Predicted RBP	11.62	□□□□□ -0.55
TP53-224	ENST00000619186	COIL	P38432	576 aa	Predicted RBP	11.62	□□□□□ -0.55
TP53-224	ENST00000619186	ACTR2	P61160	394 aa		11.62	□□□□□ -0.55
TP53-224	ENST00000619186	VGLL4	Q14135	290 aa		11.62	□□□□□ -0.55
TP53-224	ENST00000619186	TRIP13	Q15645	432 aa	Predicted RBP	11.62	□□□□□ -0.55
TP53-224	ENST00000619186	TDRD10	Q5VZ19	366 aa	Known RBP	11.62	□□□□□ -0.55
TP53-224	ENST00000619186	CRELD2	Q6UXH1	353 aa	Predicted RBP	11.62	□□□□□ -0.55
TP53-224	ENST00000619186	C15orf39	Q6ZRI6	1047 aa		11.62	□□□□□ -0.55
TP53-224	ENST00000619186	TLCD1	Q96CP7	247 aa		11.62	□□□□□ -0.55
TP53-224	ENST00000619186	CYFIP2	Q96F07	1278 aa		11.62	□□□□□ -0.55
TP53-224	ENST00000619186	CLMN	Q96JQ2	1002 aa		11.62	□□□□□ -0.55
TP53-224	ENST00000619186	DDX23	Q9BUQ8	820 aa	Known RBP	11.62	□□□□□ -0.55
TP53-224	ENST00000619186	PABPC3	Q9H361	631 aa	Known RBP	11.62	□□□□□ -0.55
TP53-224	ENST00000619186	APOBEC3G	Q9HC16	384 aa	Known RBP	11.62	□□□□□ -0.55
TP53-224	ENST00000619186	CYP26B1	Q9NR63	512 aa		11.62	□□□□□ -0.55
TP53-224	ENST00000619186	AAAS	Q9NRG9	546 aa		11.62	□□□□□ -0.55
TP53-224	ENST00000619186	ANAPC7	Q9UJX3	599 aa		11.62	□□□□□ -0.55
TP53-224	ENST00000619186	GTF3C4	Q9UKN8	822 aa		11.62	□□□□□ -0.55
TP53-224	ENST00000619186	R3HDM2	Q9Y2K5	976 aa	Known RBP	11.62	□□□□□ -0.55
TP53-224	ENST00000619186	CTDP1	Q9Y5B0	961 aa	Predicted RBP	11.62	□□□□□ -0.55
TP53-224	ENST00000619186	MYH9	P35579	1960 aa	Known RBP	11.62	□□□□□ -0.55
TP53-224	ENST00000619186	MYPN	Q86TC9	1320 aa		11.62	□□□□□ -0.55
TP53-224	ENST00000619186	STK25	O00506	426 aa		11.61	□□□□□ -0.55
TP53-224	ENST00000619186	TRAPPC3	O43617	180 aa		11.61	□□□□□ -0.55
TP53-224	ENST00000619186	VNN1	O95497	513 aa		11.61	□□□□□ -0.55
TP53-224	ENST00000619186	FAM107A	O95990	144 aa		11.61	□□□□□ -0.55
TP53-224	ENST00000619186	CCND2	P30279	289 aa		11.61	□□□□□ -0.55
TP53-224	ENST00000619186	CHRNA3	P32297	505 aa		11.61	□□□□□ -0.55
TP53-224	ENST00000619186	IFFO1	Q0D2I5	559 aa		11.61	□□□□□ -0.55
TP53-224	ENST00000619186	MTMR3	Q13615	1198 aa		11.61	□□□□□ -0.55
TP53-224	ENST00000619186	DHX34	Q14147	1143 aa	Known RBP	11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms