RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 SGMS1Q86VZ5 419 aa8.63□□□□□ -1.03
CBWD1-228ENST00000619157 HOMER1Q86YM7 354 aa8.63□□□□□ -1.03
CBWD1-228ENST00000619157 C7orf61Q8IZ16 206 aa8.63□□□□□ -1.03
CBWD1-228ENST00000619157 SRBD1Q8N5C6 995 aaKnown RBP8.63□□□□□ -1.03
CBWD1-228ENST00000619157 RGS22Q8NE09 1264 aa8.63□□□□□ -1.03
CBWD1-228ENST00000619157 FBXO27Q8NI29 283 aa8.63□□□□□ -1.03
CBWD1-228ENST00000619157 NUP133Q8WUM0 1156 aa8.63□□□□□ -1.03
CBWD1-228ENST00000619157 FERMT2Q96AC1 680 aa8.63□□□□□ -1.03
CBWD1-228ENST00000619157 BORCS6Q96GS4 357 aa8.63□□□□□ -1.03
CBWD1-228ENST00000619157 NEK1Q96PY6 1258 aa8.63□□□□□ -1.03
CBWD1-228ENST00000619157 TAAR1Q96RJ0 339 aa8.63□□□□□ -1.03
CBWD1-228ENST00000619157 MTA3Q9BTC8 594 aa8.63□□□□□ -1.03
CBWD1-228ENST00000619157 UPF3AQ9H1J1 476 aaKnown RBP8.63□□□□□ -1.03
CBWD1-228ENST00000619157 FAM184BQ9ULE4 1060 aa8.63□□□□□ -1.03
CBWD1-228ENST00000619157 ZMYND8Q9ULU4 1186 aaPredicted RBP8.63□□□□□ -1.03
CBWD1-228ENST00000619157 BAZ2BQ9UIF8 2168 aaKnown RBP8.62□□□□□ -1.03
CBWD1-228ENST00000619157 ABCB11O95342 1321 aa8.62□□□□□ -1.03
CBWD1-228ENST00000619157 hCG_1642624A0A1W2PR95 340 aa8.62□□□□□ -1.03
CBWD1-228ENST00000619157 ERICH2A1L162 156 aa8.62□□□□□ -1.03
CBWD1-228ENST00000619157 ASB14A6NK59 587 aa8.62□□□□□ -1.03
CBWD1-228ENST00000619157 RGS13O14921 159 aa8.62□□□□□ -1.03
CBWD1-228ENST00000619157 DHX16O60231 1041 aaKnown RBP8.62□□□□□ -1.03
CBWD1-228ENST00000619157 BUB1BO60566 1050 aaPredicted RBP8.62□□□□□ -1.03
CBWD1-228ENST00000619157 DUSP11O75319 330 aaKnown RBP8.62□□□□□ -1.03
CBWD1-228ENST00000619157 ARIH2O95376 493 aa8.62□□□□□ -1.03
CBWD1-228ENST00000619157 CENPBP07199 599 aaPredicted RBP8.62□□□□□ -1.03
CBWD1-228ENST00000619157 HSD17B4P51659 736 aa8.62□□□□□ -1.03
CBWD1-228ENST00000619157 GJA9P57773 515 aa8.62□□□□□ -1.03
CBWD1-228ENST00000619157 BEX3Q00994 111 aa8.62□□□□□ -1.03
CBWD1-228ENST00000619157 SART3Q15020 963 aaKnown RBP8.62□□□□□ -1.03
CBWD1-228ENST00000619157 ARSHQ5FYA8 562 aa8.62□□□□□ -1.03
CBWD1-228ENST00000619157 GALNT18Q6P9A2 607 aa8.62□□□□□ -1.03
CBWD1-228ENST00000619157 APOA5Q6Q788 366 aa8.62□□□□□ -1.03
CBWD1-228ENST00000619157 CASC1Q6TDU7 716 aa8.62□□□□□ -1.03
CBWD1-228ENST00000619157 SLC39A5Q6ZMH5 540 aa8.62□□□□□ -1.03
CBWD1-228ENST00000619157 CATIPQ7Z7H3 387 aa8.62□□□□□ -1.03
CBWD1-228ENST00000619157 ARRDC4Q8NCT1 418 aa8.62□□□□□ -1.03
CBWD1-228ENST00000619157 PIBF1Q8WXW3 757 aa8.62□□□□□ -1.03
CBWD1-228ENST00000619157 FCRL2Q96LA5 508 aaPredicted RBP8.62□□□□□ -1.03
CBWD1-228ENST00000619157 MAP3K14Q99558 947 aa8.62□□□□□ -1.03
CBWD1-228ENST00000619157 SPZ1Q9BXG8 430 aa8.62□□□□□ -1.03
CBWD1-228ENST00000619157 AMNQ9BXJ7 453 aa8.62□□□□□ -1.03
CBWD1-228ENST00000619157 PCDHA5Q9Y5H7 936 aa8.62□□□□□ -1.03
CBWD1-228ENST00000619157 A0A1W2PQ45 241 aaPredicted RBP8.61□□□□□ -1.03
CBWD1-228ENST00000619157 A0A1W2PQY0 241 aa8.61□□□□□ -1.03
CBWD1-228ENST00000619157 FADS2P1A8MWK0 482 aa8.61□□□□□ -1.03
CBWD1-228ENST00000619157 MEIS1O00470 390 aa8.61□□□□□ -1.03
CBWD1-228ENST00000619157 PRICKLE3O43900 615 aaPredicted RBP8.61□□□□□ -1.03
CBWD1-228ENST00000619157 CTSHP09668 335 aa8.61□□□□□ -1.03
CBWD1-228ENST00000619157 PRKCAP17252 672 aa8.61□□□□□ -1.03
CBWD1-228ENST00000619157 CST5P28325 142 aaPredicted RBP8.61□□□□□ -1.03
CBWD1-228ENST00000619157 POLR2BP30876 1174 aaKnown RBP8.61□□□□□ -1.03
CBWD1-228ENST00000619157 HOXA13P31271 388 aaPredicted RBP8.61□□□□□ -1.03
CBWD1-228ENST00000619157 ARL4AP40617 200 aa8.61□□□□□ -1.03
CBWD1-228ENST00000619157 LIMS1P48059 325 aa8.61□□□□□ -1.03
CBWD1-228ENST00000619157 ST13P50502 369 aaKnown RBP8.61□□□□□ -1.03
CBWD1-228ENST00000619157 TNFAIP2Q03169 654 aa8.61□□□□□ -1.03
CBWD1-228ENST00000619157 EFEMP1Q12805 493 aa8.61□□□□□ -1.03
CBWD1-228ENST00000619157 RTP5Q14D33 572 aa8.61□□□□□ -1.03
CBWD1-228ENST00000619157 ZXDCQ2QGD7 858 aaPredicted RBP8.61□□□□□ -1.03
CBWD1-228ENST00000619157 TRIM60Q495X7 471 aa8.61□□□□□ -1.03
CBWD1-228ENST00000619157 SPATS1Q496A3 300 aa8.61□□□□□ -1.03
CBWD1-228ENST00000619157 TMTC3Q6ZXV5 915 aa8.61□□□□□ -1.03
CBWD1-228ENST00000619157 FRMD5Q7Z6J6 570 aa8.61□□□□□ -1.03
CBWD1-228ENST00000619157 MICU3Q86XE3 530 aa8.61□□□□□ -1.03
CBWD1-228ENST00000619157 DNERQ8NFT8 737 aa8.61□□□□□ -1.03
CBWD1-228ENST00000619157 IL31RAQ8NI17 732 aa8.61□□□□□ -1.03
CBWD1-228ENST00000619157 COPS5Q92905 334 aa8.61□□□□□ -1.03
CBWD1-228ENST00000619157 RHOVQ96L33 236 aa8.61□□□□□ -1.03
CBWD1-228ENST00000619157 GDF15Q99988 308 aa8.61□□□□□ -1.03
CBWD1-228ENST00000619157 VTA1Q9NP79 307 aa8.61□□□□□ -1.03
CBWD1-228ENST00000619157 ADD3Q9UEY8 706 aaKnown RBP8.61□□□□□ -1.03
CBWD1-228ENST00000619157 PARP2Q9UGN5 583 aa8.61□□□□□ -1.03
CBWD1-228ENST00000619157 PCDHA1Q9Y5I3 950 aa8.61□□□□□ -1.03
CBWD1-228ENST00000619157 GRIN2DO15399 1336 aa8.6□□□□□ -1.03
CBWD1-228ENST00000619157 CCDC69A6NI79 296 aa8.6□□□□□ -1.03
CBWD1-228ENST00000619157 KBTBD13C9JR72 458 aa8.6□□□□□ -1.03
CBWD1-228ENST00000619157 ADAMTS3O15072 1205 aa8.6□□□□□ -1.03
CBWD1-228ENST00000619157 CFBP00751 764 aa8.6□□□□□ -1.03
CBWD1-228ENST00000619157 ASGR1P07306 291 aa8.6□□□□□ -1.03
CBWD1-228ENST00000619157 C6orf222P0C671 652 aaPredicted RBP8.6□□□□□ -1.03
CBWD1-228ENST00000619157 INSRRP14616 1297 aa8.6□□□□□ -1.03
CBWD1-228ENST00000619157 RAG1P15918 1043 aa8.6□□□□□ -1.03
CBWD1-228ENST00000619157 ITGB8P26012 769 aa8.6□□□□□ -1.03
CBWD1-228ENST00000619157 GBP2P32456 591 aaPredicted RBP8.6□□□□□ -1.03
CBWD1-228ENST00000619157 ACLYP53396 1101 aa8.6□□□□□ -1.03
CBWD1-228ENST00000619157 PSMD2Q13200 908 aa8.6□□□□□ -1.03
CBWD1-228ENST00000619157 PUM1Q14671 1186 aaKnown RBP eCLIP8.6□□□□□ -1.03
CBWD1-228ENST00000619157 HABP4Q5JVS0 413 aaKnown RBP8.6□□□□□ -1.03
CBWD1-228ENST00000619157 SNAP47Q5SQN1 464 aa8.6□□□□□ -1.03
CBWD1-228ENST00000619157 CCDC62Q6P9F0 684 aa8.6□□□□□ -1.03
CBWD1-228ENST00000619157 RNF180Q86T96 592 aa8.6□□□□□ -1.03
CBWD1-228ENST00000619157 FANCBQ8NB91 859 aa8.6□□□□□ -1.03
CBWD1-228ENST00000619157 FAM161BQ96MY7 647 aa8.6□□□□□ -1.03
CBWD1-228ENST00000619157 JAKMIP1Q96N16 626 aaKnown RBP8.6□□□□□ -1.03
CBWD1-228ENST00000619157 AGXT2Q9BYV1 514 aa8.6□□□□□ -1.03
CBWD1-228ENST00000619157 PXMP2Q9NR77 195 aa8.6□□□□□ -1.03
CBWD1-228ENST00000619157 TNFRSF10DQ9UBN6 386 aa8.6□□□□□ -1.03
CBWD1-228ENST00000619157 PNMA2Q9UL42 364 aa8.6□□□□□ -1.03
CBWD1-228ENST00000619157 MRPL11Q9Y3B7 192 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms