RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-223ENST00000618944 FAM118BQ9BPY3 351 aa11.98□□□□□ -0.49
TP53-223ENST00000618944 HEMGNQ9BXL5 484 aa11.98□□□□□ -0.49
TP53-223ENST00000618944 PTPRJQ12913 1337 aa11.98□□□□□ -0.49
TP53-223ENST00000618944 LRRIQ4A6NIV6 560 aa11.98□□□□□ -0.49
TP53-223ENST00000618944 HLA-DRAP01903 254 aa11.98□□□□□ -0.49
TP53-223ENST00000618944 HARSP12081 509 aaKnown RBP11.98□□□□□ -0.49
TP53-223ENST00000618944 UNGP13051 313 aaPredicted RBP11.98□□□□□ -0.49
TP53-223ENST00000618944 ATP4AP20648 1035 aa11.98□□□□□ -0.49
TP53-223ENST00000618944 GARTP22102 1010 aa11.98□□□□□ -0.49
TP53-223ENST00000618944 SGO2Q562F6 1265 aa11.98□□□□□ -0.49
TP53-223ENST00000618944 TDRD10Q5VZ19 366 aaKnown RBP11.98□□□□□ -0.49
TP53-223ENST00000618944 SEPT14Q6ZU15 432 aa11.98□□□□□ -0.49
TP53-223ENST00000618944 SELENOSQ9BQE4 189 aa11.98□□□□□ -0.49
TP53-223ENST00000618944 HERPUD2Q9BSE4 406 aa11.98□□□□□ -0.49
TP53-223ENST00000618944 HAPLN2Q9GZV7 340 aa11.98□□□□□ -0.49
TP53-223ENST00000618944 CHST7Q9NS84 486 aa11.98□□□□□ -0.49
TP53-223ENST00000618944 DNAJC17Q9NVM6 304 aaKnown RBP11.98□□□□□ -0.49
TP53-223ENST00000618944 ARHGAP28Q9P2N2 729 aa11.98□□□□□ -0.49
TP53-223ENST00000618944 ANKFY1Q9P2R3 1169 aa11.98□□□□□ -0.49
TP53-223ENST00000618944 MTRF1LQ9UGC7 380 aaKnown RBP11.98□□□□□ -0.49
TP53-223ENST00000618944 MROH7Q68CQ1 1323 aa11.98□□□□□ -0.49
TP53-223ENST00000618944 O00370 1275 aa11.97□□□□□ -0.49
TP53-223ENST00000618944 MEFVO15553 781 aaPredicted RBP11.97□□□□□ -0.49
TP53-223ENST00000618944 EXTL3O43909 919 aa11.97□□□□□ -0.49
TP53-223ENST00000618944 ECEL1O95672 775 aa11.97□□□□□ -0.49
TP53-223ENST00000618944 PIK3CAP42336 1068 aa11.97□□□□□ -0.49
TP53-223ENST00000618944 SSR1P43307 286 aaKnown RBP11.97□□□□□ -0.49
TP53-223ENST00000618944 MCCD1P59942 119 aaPredicted RBP11.97□□□□□ -0.49
TP53-223ENST00000618944 CNTN2Q02246 1040 aa11.97□□□□□ -0.49
TP53-223ENST00000618944 GCNT1Q02742 428 aa11.97□□□□□ -0.49
TP53-223ENST00000618944 STRN3Q13033 797 aa11.97□□□□□ -0.49
TP53-223ENST00000618944 ANGEL2Q5VTE6 544 aaKnown RBP11.97□□□□□ -0.49
TP53-223ENST00000618944 MIS18BP1Q6P0N0 1132 aa11.97□□□□□ -0.49
TP53-223ENST00000618944 HOOK3Q86VS8 718 aa11.97□□□□□ -0.49
TP53-223ENST00000618944 ASAP3Q8TDY4 903 aa11.97□□□□□ -0.49
TP53-223ENST00000618944 EPS8L3Q8TE67 593 aaKnown RBP11.97□□□□□ -0.49
TP53-223ENST00000618944 TLCD1Q96CP7 247 aa11.97□□□□□ -0.49
TP53-223ENST00000618944 AS3MTQ9HBK9 375 aa11.97□□□□□ -0.49
TP53-223ENST00000618944 DDX20Q9UHI6 824 aaKnown RBP11.97□□□□□ -0.49
TP53-223ENST00000618944 AGO2Q9UKV8 859 aaKnown RBP11.97□□□□□ -0.49
TP53-223ENST00000618944 SPATA31C2B4DYI2 1134 aa11.97□□□□□ -0.49
TP53-223ENST00000618944 K7ERI5 159 aa11.97□□□□□ -0.49
TP53-223ENST00000618944 RGS16O15492 202 aaPredicted RBP11.97□□□□□ -0.49
TP53-223ENST00000618944 DKC1O60832 514 aaKnown RBP eCLIP11.97□□□□□ -0.49
TP53-223ENST00000618944 GJB6O95452 261 aa11.97□□□□□ -0.49
TP53-223ENST00000618944 VNN1O95497 513 aa11.97□□□□□ -0.49
TP53-223ENST00000618944 C4BPAP04003 597 aaKnown RBP11.97□□□□□ -0.49
TP53-223ENST00000618944 NUDT17P0C025 328 aa11.97□□□□□ -0.49
TP53-223ENST00000618944 FDX1P10109 184 aa11.97□□□□□ -0.49
TP53-223ENST00000618944 GJC1P36383 396 aa11.97□□□□□ -0.49
TP53-223ENST00000618944 VPS41P49754 854 aa11.97□□□□□ -0.49
TP53-223ENST00000618944 EMC2Q15006 297 aa11.97□□□□□ -0.49
TP53-223ENST00000618944 CYP1B1Q16678 543 aa11.97□□□□□ -0.49
TP53-223ENST00000618944 XKR3Q5GH77 459 aa11.97□□□□□ -0.49
TP53-223ENST00000618944 FBXW10Q5XX13 1052 aa11.97□□□□□ -0.49
TP53-223ENST00000618944 DCAF15Q66K64 600 aa11.97□□□□□ -0.49
TP53-223ENST00000618944 POTEAQ6S8J7 498 aa11.97□□□□□ -0.49
TP53-223ENST00000618944 ART4Q93070 314 aa11.97□□□□□ -0.49
TP53-223ENST00000618944 TARS2Q9BW92 718 aaKnown RBP11.97□□□□□ -0.49
TP53-223ENST00000618944 CCDC113Q9H0I3 377 aa11.97□□□□□ -0.49
TP53-223ENST00000618944 GINM1Q9NU53 330 aa11.97□□□□□ -0.49
TP53-223ENST00000618944 USTQ9Y2C2 406 aa11.97□□□□□ -0.49
TP53-223ENST00000618944 PCDHB4Q9Y5E5 795 aa11.97□□□□□ -0.49
TP53-223ENST00000618944 CAPN7Q9Y6W3 813 aa11.97□□□□□ -0.49
TP53-223ENST00000618944 MYPNQ86TC9 1320 aa11.97□□□□□ -0.49
TP53-223ENST00000618944 PASKQ96RG2 1323 aa11.97□□□□□ -0.49
TP53-223ENST00000618944 ZNF541Q9H0D2 1346 aa11.97□□□□□ -0.49
TP53-223ENST00000618944 SUPT20HL2P0C7V6 817 aa11.96□□□□□ -0.49
TP53-223ENST00000618944 CHN1P15882 459 aa11.96□□□□□ -0.49
TP53-223ENST00000618944 NSFP46459 744 aaKnown RBP11.96□□□□□ -0.49
TP53-223ENST00000618944 KRT17Q04695 432 aa11.96□□□□□ -0.49
TP53-223ENST00000618944 CALCOCO2Q13137 446 aa11.96□□□□□ -0.49
TP53-223ENST00000618944 SUPT20HL1Q3ZLR7 823 aa11.96□□□□□ -0.49
TP53-223ENST00000618944 CCDC38Q502W7 563 aa11.96□□□□□ -0.49
TP53-223ENST00000618944 TMEM270Q6UE05 265 aa11.96□□□□□ -0.49
TP53-223ENST00000618944 CRELD2Q6UXH1 353 aaPredicted RBP11.96□□□□□ -0.49
TP53-223ENST00000618944 C15orf39Q6ZRI6 1047 aa11.96□□□□□ -0.49
TP53-223ENST00000618944 MICALCLQ6ZW33 695 aa11.96□□□□□ -0.49
TP53-223ENST00000618944 CPLX4Q7Z7G2 160 aa11.96□□□□□ -0.49
TP53-223ENST00000618944 CCDC50Q8IVM0 306 aa11.96□□□□□ -0.49
TP53-223ENST00000618944 DEPTORQ8TB45 409 aa11.96□□□□□ -0.49
TP53-223ENST00000618944 KAT2BQ92831 832 aa11.96□□□□□ -0.49
TP53-223ENST00000618944 CEP89Q96ST8 783 aa11.96□□□□□ -0.49
TP53-223ENST00000618944 C11orf70Q9BRQ4 267 aa11.96□□□□□ -0.49
TP53-223ENST00000618944 DDX23Q9BUQ8 820 aaKnown RBP11.96□□□□□ -0.49
TP53-223ENST00000618944 TEX13BQ9BXU2 312 aa11.96□□□□□ -0.49
TP53-223ENST00000618944 ACAD9Q9H845 621 aa11.96□□□□□ -0.49
TP53-223ENST00000618944 APOBEC3GQ9HC16 384 aaKnown RBP11.96□□□□□ -0.49
TP53-223ENST00000618944 PARP2Q9UGN5 583 aa11.96□□□□□ -0.49
TP53-223ENST00000618944 FBXO40Q9UH90 709 aa11.96□□□□□ -0.49
TP53-223ENST00000618944 ASIC3Q9UHC3 531 aa11.96□□□□□ -0.49
TP53-223ENST00000618944 PCDHB2Q9Y5E7 798 aa11.96□□□□□ -0.49
TP53-223ENST00000618944 PSME4Q14997 1843 aa11.96□□□□□ -0.49
TP53-223ENST00000618944 FSCN2O14926 492 aa11.96□□□□□ -0.5
TP53-223ENST00000618944 RIPK2O43353 540 aa11.96□□□□□ -0.5
TP53-223ENST00000618944 GLRA2P23416 452 aa11.96□□□□□ -0.5
TP53-223ENST00000618944 NF2P35240 595 aa11.96□□□□□ -0.5
TP53-223ENST00000618944 BYSLQ13895 437 aaKnown RBP11.96□□□□□ -0.5
TP53-223ENST00000618944 PSMD6Q15008 389 aa11.96□□□□□ -0.5
TP53-223ENST00000618944 GNPTABQ3T906 1256 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 272 ms