RNA–Protein interactions for RNA: ENST00000618548.4

PCSK6-217, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 4,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-217ENST00000618548 NUDT17P0C025 328 aa21.72■■□□□ 1.07
PCSK6-217ENST00000618548 PDCD2Q16342 344 aaPredicted RBP21.72■■□□□ 1.07
PCSK6-217ENST00000618548 SNX30Q5VWJ9 437 aa21.72■■□□□ 1.07
PCSK6-217ENST00000618548 FAF2Q96CS3 445 aa21.72■■□□□ 1.07
PCSK6-217ENST00000618548 MTMR9Q96QG7 549 aa21.72■■□□□ 1.07
PCSK6-217ENST00000618548 GTF3C4Q9UKN8 822 aa21.72■■□□□ 1.07
PCSK6-217ENST00000618548 TCP10L2B9ZVM9 353 aa21.72■■□□□ 1.07
PCSK6-217ENST00000618548 MGRN1O60291 552 aa21.72■■□□□ 1.07
PCSK6-217ENST00000618548 ACADSP16219 412 aa21.72■■□□□ 1.07
PCSK6-217ENST00000618548 TPD52P55327 224 aaPredicted RBP21.72■■□□□ 1.07
PCSK6-217ENST00000618548 KCNA1Q09470 495 aa21.72■■□□□ 1.07
PCSK6-217ENST00000618548 TMEM119Q4V9L6 283 aa21.72■■□□□ 1.07
PCSK6-217ENST00000618548 C3orf62Q6ZUJ4 267 aa21.72■■□□□ 1.07
PCSK6-217ENST00000618548 LRGUKQ96M69 825 aa21.72■■□□□ 1.07
PCSK6-217ENST00000618548 CSRNP1Q96S65 589 aa21.72■■□□□ 1.07
PCSK6-217ENST00000618548 TRAF3IP3Q9Y228 551 aa21.72■■□□□ 1.07
PCSK6-217ENST00000618548 NOL4O94818 638 aa21.72■■□□□ 1.07
PCSK6-217ENST00000618548 PSMA2P25787 234 aa21.72■■□□□ 1.07
PCSK6-217ENST00000618548 COG2Q14746 738 aa21.72■■□□□ 1.07
PCSK6-217ENST00000618548 SLC5A5Q92911 643 aa21.72■■□□□ 1.07
PCSK6-217ENST00000618548 PCSK1NQ9UHG2 260 aa21.72■■□□□ 1.07
PCSK6-217ENST00000618548 DENND3A2RUS2 1198 aa21.72■■□□□ 1.07
PCSK6-217ENST00000618548 ATP9AO75110 1047 aa21.72■■□□□ 1.07
PCSK6-217ENST00000618548 GEN1Q17RS7 908 aa21.72■■□□□ 1.07
PCSK6-217ENST00000618548 DCAF4Q8WV16 495 aa21.72■■□□□ 1.07
PCSK6-217ENST00000618548 MAGEA13PA6NCF6 341 aa21.71■■□□□ 1.07
PCSK6-217ENST00000618548 RBAK-RBAKDNI3L0D1 243 aa21.71■■□□□ 1.07
PCSK6-217ENST00000618548 ARHGEF16Q5VV41 709 aa21.71■■□□□ 1.07
PCSK6-217ENST00000618548 MAGEC3Q8TD91 643 aa21.71■■□□□ 1.07
PCSK6-217ENST00000618548 PARD3BQ8TEW8 1205 aa21.71■■□□□ 1.07
PCSK6-217ENST00000618548 HSPH1Q92598 858 aa21.71■■□□□ 1.07
PCSK6-217ENST00000618548 NXF1Q9UBU9 619 aaKnown RBP21.71■■□□□ 1.07
PCSK6-217ENST00000618548 SEPT9Q9UHD8 586 aaPredicted RBP21.71■■□□□ 1.07
PCSK6-217ENST00000618548 WDR64B1ANS9 1081 aa21.71■■□□□ 1.07
PCSK6-217ENST00000618548 PRKCIP41743 596 aa21.71■■□□□ 1.07
PCSK6-217ENST00000618548 SLC1A1P43005 524 aa21.71■■□□□ 1.07
PCSK6-217ENST00000618548 MARCKSL1P49006 195 aa21.71■■□□□ 1.07
PCSK6-217ENST00000618548 LAMB3Q13751 1172 aa21.71■■□□□ 1.07
PCSK6-217ENST00000618548 SLC30A10Q6XR72 485 aa21.71■■□□□ 1.07
PCSK6-217ENST00000618548 TRIML2Q8N7C3 387 aa21.71■■□□□ 1.07
PCSK6-217ENST00000618548 CKAP2Q8WWK9 683 aa21.71■■□□□ 1.07
PCSK6-217ENST00000618548 CDKL2Q92772 493 aa21.71■■□□□ 1.07
PCSK6-217ENST00000618548 MANSC1Q9H8J5 431 aa21.71■■□□□ 1.07
PCSK6-217ENST00000618548 ATP4AP20648 1035 aa21.71■■□□□ 1.07
PCSK6-217ENST00000618548 ARL1P40616 181 aaPredicted RBP21.71■■□□□ 1.07
PCSK6-217ENST00000618548 ASPHQ12797 758 aa21.71■■□□□ 1.07
PCSK6-217ENST00000618548 PRELID2Q8N945 189 aa21.71■■□□□ 1.07
PCSK6-217ENST00000618548 NLRP7Q8WX94 980 aa21.71■■□□□ 1.07
PCSK6-217ENST00000618548 PPP1R1BQ9UD71 204 aaPredicted RBP21.71■■□□□ 1.07
PCSK6-217ENST00000618548 ARHGAP23Q9P227 1491 aa21.7■■□□□ 1.07
PCSK6-217ENST00000618548 TMEM191BP0C7N4 346 aa21.7■■□□□ 1.06
PCSK6-217ENST00000618548 PTPN4P29074 926 aa21.7■■□□□ 1.06
PCSK6-217ENST00000618548 SCARA5Q6ZMJ2 495 aa21.7■■□□□ 1.06
PCSK6-217ENST00000618548 RIBC1Q8N443 379 aaPredicted RBP21.7■■□□□ 1.06
PCSK6-217ENST00000618548 PPWD1Q96BP3 646 aaKnown RBP21.7■■□□□ 1.06
PCSK6-217ENST00000618548 ACAP3Q96P50 834 aa21.7■■□□□ 1.06
PCSK6-217ENST00000618548 ATRNO75882 1429 aa21.7■■□□□ 1.06
PCSK6-217ENST00000618548 UNC5CO95185 931 aa21.7■■□□□ 1.06
PCSK6-217ENST00000618548 ZNF572Q7Z3I7 529 aaPredicted RBP21.7■■□□□ 1.06
PCSK6-217ENST00000618548 PCGF5Q86SE9 256 aa21.7■■□□□ 1.06
PCSK6-217ENST00000618548 HES6Q96HZ4 224 aa21.7■■□□□ 1.06
PCSK6-217ENST00000618548 THEGQ9P2T0 379 aa21.7■■□□□ 1.06
PCSK6-217ENST00000618548 NR2E1Q9Y466 385 aa21.7■■□□□ 1.06
PCSK6-217ENST00000618548 ENTPD5O75356 428 aa21.7■■□□□ 1.06
PCSK6-217ENST00000618548 STK10O94804 968 aaKnown RBP21.7■■□□□ 1.06
PCSK6-217ENST00000618548 EIF2AK2P19525 551 aaKnown RBP21.7■■□□□ 1.06
PCSK6-217ENST00000618548 GNA15P30679 374 aa21.7■■□□□ 1.06
PCSK6-217ENST00000618548 CACNA2D1P54289 1103 aa21.7■■□□□ 1.06
PCSK6-217ENST00000618548 DEUP1Q05D60 604 aa21.7■■□□□ 1.06
PCSK6-217ENST00000618548 DBNDD1Q9H9R9 158 aa21.7■■□□□ 1.06
PCSK6-217ENST00000618548 ERVK-5Q9HDB9 667 aa21.7■■□□□ 1.06
PCSK6-217ENST00000618548 ANLNQ9NQW6 1124 aa21.7■■□□□ 1.06
PCSK6-217ENST00000618548 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.7■■□□□ 1.067e-7■■■■■ 65
PCSK6-217ENST00000618548 PPIP5K2O43314 1243 aa21.69■■□□□ 1.06
PCSK6-217ENST00000618548 HIC1Q14526 733 aa21.69■■□□□ 1.06
PCSK6-217ENST00000618548 MMEL1Q495T6 779 aa21.69■■□□□ 1.06
PCSK6-217ENST00000618548 ALG3Q92685 438 aa21.69■■□□□ 1.06
PCSK6-217ENST00000618548 HIC2Q96JB3 615 aa21.69■■□□□ 1.06
PCSK6-217ENST00000618548 TRIM56Q9BRZ2 755 aaKnown RBP21.69■■□□□ 1.06
PCSK6-217ENST00000618548 FGFBP2Q9BYJ0 223 aa21.69■■□□□ 1.06
PCSK6-217ENST00000618548 WWP1Q9H0M0 922 aa21.69■■□□□ 1.06
PCSK6-217ENST00000618548 MYH8P13535 1937 aa21.69■■□□□ 1.06
PCSK6-217ENST00000618548 SMAD1Q15797 465 aaKnown RBP21.69■■□□□ 1.06
PCSK6-217ENST00000618548 MAP7D3Q8IWC1 876 aa21.69■■□□□ 1.06
PCSK6-217ENST00000618548 DNAI2Q9GZS0 605 aa21.69■■□□□ 1.06
PCSK6-217ENST00000618548 C21orf2O43822 256 aa21.69■■□□□ 1.06
PCSK6-217ENST00000618548 RRP1BQ14684 758 aaKnown RBP21.69■■□□□ 1.06
PCSK6-217ENST00000618548 SPDYCQ5MJ68 293 aa21.69■■□□□ 1.06
PCSK6-217ENST00000618548 RBBP8NLQ8NC74 664 aaPredicted RBP21.69■■□□□ 1.06
PCSK6-217ENST00000618548 PI4K2AQ9BTU6 479 aa21.69■■□□□ 1.06
PCSK6-217ENST00000618548 RIOX1Q9H6W3 641 aa21.69■■□□□ 1.06
PCSK6-217ENST00000618548 TBX3O15119 743 aa21.69■■□□□ 1.06
PCSK6-217ENST00000618548 EIF3DO15371 548 aaKnown RBP eCLIP21.69■■□□□ 1.06
PCSK6-217ENST00000618548 ZBED4O75132 1171 aa21.69■■□□□ 1.06
PCSK6-217ENST00000618548 LNX1Q8TBB1 728 aaPredicted RBP21.69■■□□□ 1.06
PCSK6-217ENST00000618548 PIK3R5Q8WYR1 880 aa21.69■■□□□ 1.06
PCSK6-217ENST00000618548 TUFT1Q9NNX1 390 aa21.69■■□□□ 1.06
PCSK6-217ENST00000618548 KRT38O76015 456 aa21.68■■□□□ 1.06
PCSK6-217ENST00000618548 KRT80Q6KB66 452 aa21.68■■□□□ 1.06
PCSK6-217ENST00000618548 ICA1LQ8NDH6 482 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms