RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 TPK1Q9H3S4 243 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 SAR1AQ9NR31 198 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 CHKBQ9Y259 395 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 FAM205CA6NFA0 338 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 FOXO6A8MYZ6 492 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 CFAP99D6REC4 459 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 UBE2Q2LH0YL09 131 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 NOP56O00567 594 aaKnown RBP7.81□□□□□ -1.16
PDE6A-205ENST00000617647 KPNA4O00629 521 aaPredicted RBP7.81□□□□□ -1.16
PDE6A-205ENST00000617647 PFDN6O15212 129 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 KLHL41O60662 606 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 ZBTB11O95625 1053 aaPredicted RBP7.81□□□□□ -1.16
PDE6A-205ENST00000617647 CDK4P11802 303 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 VCLP18206 1134 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 IFNA8P32881 189 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 SLC5A3P53794 718 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 HIRAP54198 1017 aaPredicted RBP7.81□□□□□ -1.16
PDE6A-205ENST00000617647 ALDH18A1P54886 795 aaKnown RBP7.81□□□□□ -1.16
PDE6A-205ENST00000617647 PRAMEP78395 509 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 PTK2Q05397 1052 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 TTLL12Q14166 644 aaPredicted RBP7.81□□□□□ -1.16
PDE6A-205ENST00000617647 PPP2R2DQ66LE6 453 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 CHADLQ6NUI6 762 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 LMBR1LQ6UX01 489 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 SDR16C5Q8N3Y7 309 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 SLC43A3Q8NBI5 491 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 GABPB2Q8TAK5 448 aaPredicted RBP7.81□□□□□ -1.16
PDE6A-205ENST00000617647 OSCP1Q8WVF1 389 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 PURBQ96QR8 312 aaKnown RBP7.81□□□□□ -1.16
PDE6A-205ENST00000617647 HNRNPABQ99729 332 aaKnown RBP7.81□□□□□ -1.16
PDE6A-205ENST00000617647 MARCH7Q9H992 704 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 ARMCX1Q9P291 453 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 HDAC9Q9UKV0 1011 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 ZBTB1Q9Y2K1 713 aa7.81□□□□□ -1.16
PDE6A-205ENST00000617647 TTLL1O95922 423 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 LDHBP07195 334 aaKnown RBP7.8□□□□□ -1.16
PDE6A-205ENST00000617647 NUDT17P0C025 328 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 PRKACBP22694 351 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 SERPINB1P30740 379 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 ENTPD1P49961 510 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 NSUN2Q08J23 767 aaKnown RBP eCLIP7.8□□□□□ -1.16
PDE6A-205ENST00000617647 PRKG1Q13976 671 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 MESDQ14696 234 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 PUS10Q3MIT2 529 aaKnown RBP7.8□□□□□ -1.16
PDE6A-205ENST00000617647 WDR45BQ5MNZ6 344 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 DIS3LQ8TF46 1054 aaKnown RBP7.8□□□□□ -1.16
PDE6A-205ENST00000617647 BORCS5Q969J3 196 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 C9orf72Q96LT7 481 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 OSBPL6Q9BZF3 934 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 EHD1Q9H4M9 534 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 CNNM2Q9H8M5 875 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 CNOT7Q9UIV1 285 aaKnown RBP7.8□□□□□ -1.16
PDE6A-205ENST00000617647 HPS5Q9UPZ3 1129 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 ARHGEF10O15013 1369 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 KAT6BQ8WYB5 2073 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 ZNF609O15014 1411 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 RIMBP3CA6NJZ7 1639 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 RIMBP3BA6NNM3 1639 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 RIMBP3Q9UFD9 1639 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 A0A087X0T9 212 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 SH2B2O14492 632 aaPredicted RBP7.8□□□□□ -1.16
PDE6A-205ENST00000617647 ATP9BO43861 1147 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 RNASEH1O60930 286 aaKnown RBP7.8□□□□□ -1.16
PDE6A-205ENST00000617647 TPPPO94811 219 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 FAM228BP0C875 321 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 CREB1P16220 341 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 POLR2EP19388 210 aaKnown RBP7.8□□□□□ -1.16
PDE6A-205ENST00000617647 VARSP26640 1264 aaKnown RBP7.8□□□□□ -1.16
PDE6A-205ENST00000617647 CHRNA3P32297 505 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 GUCY1A2P33402 732 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 IST1P53990 364 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 PMS1P54277 932 aaKnown RBP7.8□□□□□ -1.16
PDE6A-205ENST00000617647 FOLH1Q04609 750 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 CTDSPL2Q05D32 466 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 LRRC41Q15345 812 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 C10orf76Q5T2E6 689 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 CABP7Q86V35 215 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 DNAAF5Q86Y56 855 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 PYROXD1Q8WU10 500 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 SLC35B4Q969S0 331 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 ZFYVE19Q96K21 471 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 TSSK1BQ9BXA7 367 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 LIN28AQ9H9Z2 209 aaKnown RBP7.8□□□□□ -1.16
PDE6A-205ENST00000617647 SALL4Q9UJQ4 1053 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 FAM32AQ9Y421 112 aaKnown RBP7.8□□□□□ -1.16
PDE6A-205ENST00000617647 FAM237AA0A1B0GTK4 181 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 DAB1O75553 588 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 SEC24DO94855 1032 aaPredicted RBP7.8□□□□□ -1.16
PDE6A-205ENST00000617647 RARGP13631 454 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 HSPA6P17066 643 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 GM2AP17900 193 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 JAK1P23458 1154 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 EEF1B2P24534 225 aaKnown RBP7.8□□□□□ -1.16
PDE6A-205ENST00000617647 CTNNA2P26232 953 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 BCAP31P51572 246 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 NR1H2P55055 460 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 LVRNQ6Q4G3 990 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 MRPS26Q9BYN8 205 aaKnown RBP7.8□□□□□ -1.16
PDE6A-205ENST00000617647 SLC7A5P2Q9GIP4 190 aa7.8□□□□□ -1.16
PDE6A-205ENST00000617647 RNF38Q9H0F5 515 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms