RNA–Protein interactions for RNA: ENST00000616352.4

ACACA-238, Transcript of acetyl-CoA carboxylase alpha, human

TSL 1 (best)

Gene ACACA, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACACA-238	ENST00000616352	SMIM28	A0A1B0GU29	152 aa		24.92	■■□□□ 1.58
ACACA-238	ENST00000616352	FGFR1	P11362	822 aa		24.92	■■□□□ 1.58
ACACA-238	ENST00000616352	PRKCSH	P14314	528 aa	Predicted RBP	24.92	■■□□□ 1.58
ACACA-238	ENST00000616352	KCNH2	Q12809	1159 aa		24.92	■■□□□ 1.58
ACACA-238	ENST00000616352	ZBTB6	Q15916	424 aa		24.92	■■□□□ 1.58
ACACA-238	ENST00000616352	NT5DC4	Q86YG4	428 aa		24.92	■■□□□ 1.58
ACACA-238	ENST00000616352	HERVK_113	Q902F9	699 aa		24.92	■■□□□ 1.58
ACACA-238	ENST00000616352	INTS13	Q9NVM9	706 aa		24.92	■■□□□ 1.58
ACACA-238	ENST00000616352	DERA	Q9Y315	318 aa		24.92	■■□□□ 1.58
ACACA-238	ENST00000616352	GBF1	Q92538	1859 aa		24.92	■■□□□ 1.58
ACACA-238	ENST00000616352	AMH	P03971	560 aa		24.91	■■□□□ 1.58
ACACA-238	ENST00000616352	TNNI1	P19237	187 aa		24.91	■■□□□ 1.58
ACACA-238	ENST00000616352	VWA3B	Q502W6	1294 aa		24.91	■■□□□ 1.58
ACACA-238	ENST00000616352	LMBRD2	Q68DH5	695 aa	Predicted RBP	24.91	■■□□□ 1.58
ACACA-238	ENST00000616352	OR5B17	Q8NGF7	314 aa		24.91	■■□□□ 1.58
ACACA-238	ENST00000616352	FAM84A	Q96KN4	292 aa		24.91	■■□□□ 1.58
ACACA-238	ENST00000616352	VPS16	Q9H269	839 aa		24.91	■■□□□ 1.58
ACACA-238	ENST00000616352	NDST4	Q9H3R1	872 aa		24.91	■■□□□ 1.58
ACACA-238	ENST00000616352	MIOS	Q9NXC5	875 aa		24.91	■■□□□ 1.58
ACACA-238	ENST00000616352	CXXC1	Q9P0U4	656 aa	Predicted RBP	24.91	■■□□□ 1.58
ACACA-238	ENST00000616352	LRFN2	Q9ULH4	789 aa		24.91	■■□□□ 1.58
ACACA-238	ENST00000616352	PLAGL2	Q9UPG8	496 aa		24.91	■■□□□ 1.58
ACACA-238	ENST00000616352	GOLGA6L3	A6NEY3	463 aa		24.9	■■□□□ 1.58
ACACA-238	ENST00000616352	GTF2H1	P32780	548 aa		24.9	■■□□□ 1.58
ACACA-238	ENST00000616352	GSE1	Q14687	1217 aa		24.9	■■□□□ 1.58
ACACA-238	ENST00000616352	TMEM132D	Q14C87	1099 aa		24.9	■■□□□ 1.58
ACACA-238	ENST00000616352	GLRA4	Q5JXX5	417 aa		24.9	■■□□□ 1.58
ACACA-238	ENST00000616352	SARM1	Q6SZW1	724 aa		24.9	■■□□□ 1.58
ACACA-238	ENST00000616352	GLB1L	Q6UWU2	654 aa		24.9	■■□□□ 1.58
ACACA-238	ENST00000616352	C15orf39	Q6ZRI6	1047 aa		24.9	■■□□□ 1.58
ACACA-238	ENST00000616352	HELQ	Q8TDG4	1101 aa		24.9	■■□□□ 1.58
ACACA-238	ENST00000616352	KIF12	Q96FN5	646 aa		24.9	■■□□□ 1.58
ACACA-238	ENST00000616352	PPP1R10	Q96QC0	940 aa	Known RBP	24.9	■■□□□ 1.58
ACACA-238	ENST00000616352	AP5Z1	O43299	807 aa		24.9	■■□□□ 1.58
ACACA-238	ENST00000616352	SERPINC1	P01008	464 aa		24.9	■■□□□ 1.58
ACACA-238	ENST00000616352	AFP	P02771	609 aa	Known RBP	24.9	■■□□□ 1.58
ACACA-238	ENST00000616352	KCNJ6	P48051	423 aa		24.9	■■□□□ 1.58
ACACA-238	ENST00000616352	GCLM	P48507	274 aa		24.9	■■□□□ 1.58
ACACA-238	ENST00000616352	FMO5	P49326	533 aa		24.9	■■□□□ 1.58
ACACA-238	ENST00000616352	NAB2	Q15742	525 aa		24.9	■■□□□ 1.58
ACACA-238	ENST00000616352	CBWD6	Q4V339	395 aa		24.9	■■□□□ 1.58
ACACA-238	ENST00000616352	CBWD3	Q5JTY5	395 aa		24.9	■■□□□ 1.58
ACACA-238	ENST00000616352	CBWD5	Q5RIA9	395 aa		24.9	■■□□□ 1.58
ACACA-238	ENST00000616352	RASIP1	Q5U651	963 aa		24.9	■■□□□ 1.58
ACACA-238	ENST00000616352	NAP1L5	Q96NT1	182 aa	Predicted RBP	24.9	■■□□□ 1.58
ACACA-238	ENST00000616352	RPS6KC1	Q96S38	1066 aa		24.9	■■□□□ 1.58
ACACA-238	ENST00000616352	MTMR12	Q9C0I1	747 aa		24.9	■■□□□ 1.58
ACACA-238	ENST00000616352	KIAA1671	Q9BY89	1806 aa		24.89	■■□□□ 1.58
ACACA-238	ENST00000616352		A0A1B0GTH6	734 aa		24.89	■■□□□ 1.57
ACACA-238	ENST00000616352	LGALS16	A8MUM7	142 aa		24.89	■■□□□ 1.57
ACACA-238	ENST00000616352	HOXA2	O43364	376 aa		24.89	■■□□□ 1.57
ACACA-238	ENST00000616352	STX10	O60499	249 aa		24.89	■■□□□ 1.57
ACACA-238	ENST00000616352	C4BPA	P04003	597 aa	Known RBP	24.89	■■□□□ 1.57
ACACA-238	ENST00000616352	SCNN1G	P51170	649 aa		24.89	■■□□□ 1.57
ACACA-238	ENST00000616352	AP3M2	P53677	418 aa		24.89	■■□□□ 1.57
ACACA-238	ENST00000616352	DUOXA2	Q1HG44	320 aa		24.89	■■□□□ 1.57
ACACA-238	ENST00000616352	TMEM117	Q9H0C3	514 aa		24.89	■■□□□ 1.57
ACACA-238	ENST00000616352	TMEM8A	Q9HCN3	771 aa		24.89	■■□□□ 1.57
ACACA-238	ENST00000616352	ZBBX	A8MT70	800 aa		24.88	■■□□□ 1.57
ACACA-238	ENST00000616352	TULP1	O00294	542 aa	Predicted RBP	24.88	■■□□□ 1.57
ACACA-238	ENST00000616352	PMM2	O15305	246 aa		24.88	■■□□□ 1.57
ACACA-238	ENST00000616352	DGKI	O75912	1065 aa		24.88	■■□□□ 1.57
ACACA-238	ENST00000616352	TFAM	Q00059	246 aa	Known RBP	24.88	■■□□□ 1.57
ACACA-238	ENST00000616352	ZACN	Q401N2	412 aa		24.88	■■□□□ 1.57
ACACA-238	ENST00000616352	SV2A	Q7L0J3	742 aa		24.88	■■□□□ 1.57
ACACA-238	ENST00000616352	RSPH1	Q8WYR4	309 aa		24.88	■■□□□ 1.57
ACACA-238	ENST00000616352	CASD1	Q96PB1	797 aa		24.88	■■□□□ 1.57
ACACA-238	ENST00000616352	GRPEL1	Q9HAV7	217 aa		24.88	■■□□□ 1.57
ACACA-238	ENST00000616352	RTN4	Q9NQC3	1192 aa	Known RBP	24.88	■■□□□ 1.57
ACACA-238	ENST00000616352	INPP5F	Q9Y2H2	1132 aa		24.88	■■□□□ 1.57
ACACA-238	ENST00000616352		H0YGN5	161 aa		24.87	■■□□□ 1.57
ACACA-238	ENST00000616352	UPP2	O95045	317 aa		24.87	■■□□□ 1.57
ACACA-238	ENST00000616352	TH	P07101	528 aa		24.87	■■□□□ 1.57
ACACA-238	ENST00000616352	TPM2	P07951	284 aa		24.87	■■□□□ 1.57
ACACA-238	ENST00000616352	GATM	P50440	423 aa		24.87	■■□□□ 1.57
ACACA-238	ENST00000616352	MXI1	P50539	228 aa		24.87	■■□□□ 1.57
ACACA-238	ENST00000616352	UBASH3A	P57075	661 aa		24.87	■■□□□ 1.57
ACACA-238	ENST00000616352	GRIK3	Q13003	919 aa		24.87	■■□□□ 1.57
ACACA-238	ENST00000616352	NOMO2	Q5JPE7	1267 aa		24.87	■■□□□ 1.57
ACACA-238	ENST00000616352	TDRD10	Q5VZ19	366 aa	Known RBP	24.87	■■□□□ 1.57
ACACA-238	ENST00000616352	TMCO2	Q7Z6W1	182 aa	Predicted RBP	24.87	■■□□□ 1.57
ACACA-238	ENST00000616352	C18orf25	Q96B23	403 aa	Predicted RBP	24.87	■■□□□ 1.57
ACACA-238	ENST00000616352	ANKRD36BP1	Q96IX9	119 aa		24.87	■■□□□ 1.57
ACACA-238	ENST00000616352	MMRN2	Q9H8L6	949 aa		24.87	■■□□□ 1.57
ACACA-238	ENST00000616352	RC3H2	Q9HBD1	1191 aa	Known RBP	24.87	■■□□□ 1.57
ACACA-238	ENST00000616352	IFNK	Q9P0W0	207 aa		24.87	■■□□□ 1.57
ACACA-238	ENST00000616352	UBQLN1	Q9UMX0	589 aa	Known RBP	24.87	■■□□□ 1.57
ACACA-238	ENST00000616352	TMEM191B	P0C7N4	346 aa		24.86	■■□□□ 1.57
ACACA-238	ENST00000616352	NR1I3	Q14994	352 aa		24.86	■■□□□ 1.57
ACACA-238	ENST00000616352	KRT39	Q6A163	491 aa		24.86	■■□□□ 1.57
ACACA-238	ENST00000616352	TRAPPC11	Q7Z392	1133 aa		24.86	■■□□□ 1.57
ACACA-238	ENST00000616352	CXorf38	Q8TB03	319 aa		24.86	■■□□□ 1.57
ACACA-238	ENST00000616352	CACTIN	Q8WUQ7	758 aa	Known RBP	24.86	■■□□□ 1.57
ACACA-238	ENST00000616352	GDF15	Q99988	308 aa		24.86	■■□□□ 1.57
ACACA-238	ENST00000616352	TUBGCP4	Q9UGJ1	667 aa		24.86	■■□□□ 1.57
ACACA-238	ENST00000616352	P4HA2	O15460	535 aa		24.86	■■□□□ 1.57
ACACA-238	ENST00000616352	N4BP1	O75113	896 aa	Known RBP	24.86	■■□□□ 1.57
ACACA-238	ENST00000616352	POMC	P01189	267 aa		24.86	■■□□□ 1.57
ACACA-238	ENST00000616352	CYP3A5	P20815	502 aa		24.86	■■□□□ 1.57
ACACA-238	ENST00000616352	SOX4	Q06945	474 aa	Predicted RBP	24.86	■■□□□ 1.57

Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms