RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 NECAB2Q7Z6G3 386 aa3.48□□□□□ -1.85
HMGB1P24-202ENST00000615653 CERS3Q8IU89 383 aa3.48□□□□□ -1.85
HMGB1P24-202ENST00000615653 DRC7Q8IY82 874 aa3.48□□□□□ -1.85
HMGB1P24-202ENST00000615653 OR10H5Q8NGA6 315 aa3.48□□□□□ -1.85
HMGB1P24-202ENST00000615653 ATL2Q8NHH9 583 aa3.48□□□□□ -1.85
HMGB1P24-202ENST00000615653 ZFP28Q8NHY6 868 aa3.48□□□□□ -1.85
HMGB1P24-202ENST00000615653 WDR66Q8TBY9 1149 aa3.48□□□□□ -1.85
HMGB1P24-202ENST00000615653 RIN2Q8WYP3 895 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P24-202ENST00000615653 LINC00476Q8WZB0 136 aa3.48□□□□□ -1.85
HMGB1P24-202ENST00000615653 TFAP2CQ92754 450 aa3.48□□□□□ -1.85
HMGB1P24-202ENST00000615653 MYEOVQ96EZ4 313 aa3.48□□□□□ -1.85
HMGB1P24-202ENST00000615653 COQ10AQ96MF6 247 aa3.48□□□□□ -1.85
HMGB1P24-202ENST00000615653 CCM2LQ9NUG4 571 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P24-202ENST00000615653 C14orf119Q9NWQ9 140 aa3.48□□□□□ -1.85
HMGB1P24-202ENST00000615653 EDARQ9UNE0 448 aa3.48□□□□□ -1.85
HMGB1P24-202ENST00000615653 CHST2Q9Y4C5 530 aa3.48□□□□□ -1.85
HMGB1P24-202ENST00000615653 ANKRD62A6NC57 917 aa3.47□□□□□ -1.85
HMGB1P24-202ENST00000615653 TBKBP1A7MCY6 615 aa3.47□□□□□ -1.85
HMGB1P24-202ENST00000615653 AHRRA9YTQ3 701 aa3.47□□□□□ -1.85
HMGB1P24-202ENST00000615653 TRIM38O00635 465 aa3.47□□□□□ -1.85
HMGB1P24-202ENST00000615653 TEX33O43247 280 aa3.47□□□□□ -1.85
HMGB1P24-202ENST00000615653 PRKD3O94806 890 aa3.47□□□□□ -1.85
HMGB1P24-202ENST00000615653 IL2RBP14784 551 aa3.47□□□□□ -1.85
HMGB1P24-202ENST00000615653 ZSCAN20P17040 1043 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P24-202ENST00000615653 APOBEC3AP31941 199 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P24-202ENST00000615653 MTNR1BP49286 362 aa3.47□□□□□ -1.85
HMGB1P24-202ENST00000615653 MXRA7P84157 204 aa3.47□□□□□ -1.85
HMGB1P24-202ENST00000615653 MGAT2Q10469 447 aa3.47□□□□□ -1.85
HMGB1P24-202ENST00000615653 BMT2Q1RMZ1 405 aa3.47□□□□□ -1.85
HMGB1P24-202ENST00000615653 RRP12Q5JTH9 1297 aaKnown RBP3.47□□□□□ -1.85
HMGB1P24-202ENST00000615653 PRAMEF14Q5SWL7 426 aa3.47□□□□□ -1.85
HMGB1P24-202ENST00000615653 TRMT2AQ8IZ69 625 aaKnown RBP3.47□□□□□ -1.85
HMGB1P24-202ENST00000615653 MDM1Q8TC05 714 aa3.47□□□□□ -1.85
HMGB1P24-202ENST00000615653 CASKIN2Q8WXE0 1202 aa3.47□□□□□ -1.85
HMGB1P24-202ENST00000615653 ADI1Q9BV57 179 aa3.47□□□□□ -1.85
HMGB1P24-202ENST00000615653 WDR11Q9BZH6 1224 aa3.47□□□□□ -1.85
HMGB1P24-202ENST00000615653 SPC25Q9HBM1 224 aa3.47□□□□□ -1.85
HMGB1P24-202ENST00000615653 SPON1Q9HCB6 807 aa3.47□□□□□ -1.85
HMGB1P24-202ENST00000615653 LANCL2Q9NS86 450 aa3.47□□□□□ -1.85
HMGB1P24-202ENST00000615653 MOCS1Q9NZB8 636 aa3.47□□□□□ -1.85
HMGB1P24-202ENST00000615653 TRIM75PA6NK02 468 aa3.46□□□□□ -1.86
HMGB1P24-202ENST00000615653 TMEM200CA6NKL6 621 aa3.46□□□□□ -1.86
HMGB1P24-202ENST00000615653 HMGB1P1B2RPK0 211 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P24-202ENST00000615653 MATN4O95460 622 aa3.46□□□□□ -1.86
HMGB1P24-202ENST00000615653 IGLV2-14P01704 120 aa3.46□□□□□ -1.86
HMGB1P24-202ENST00000615653 HLA-DOAP06340 250 aa3.46□□□□□ -1.86
HMGB1P24-202ENST00000615653 KRT10P13645 584 aa3.46□□□□□ -1.86
HMGB1P24-202ENST00000615653 ALOX15P16050 662 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P24-202ENST00000615653 CXCR5P32302 372 aa3.46□□□□□ -1.86
HMGB1P24-202ENST00000615653 PTPN7P35236 360 aa3.46□□□□□ -1.86
HMGB1P24-202ENST00000615653 BMPR1AP36894 532 aa3.46□□□□□ -1.86
HMGB1P24-202ENST00000615653 MCAMP43121 646 aa3.46□□□□□ -1.86
HMGB1P24-202ENST00000615653 GPR3P46089 330 aa3.46□□□□□ -1.86
HMGB1P24-202ENST00000615653 SEC24CP53992 1094 aa3.46□□□□□ -1.86
HMGB1P24-202ENST00000615653 SCAND1P57086 179 aa3.46□□□□□ -1.86
HMGB1P24-202ENST00000615653 CLRN1P58418 232 aa3.46□□□□□ -1.86
HMGB1P24-202ENST00000615653 ERVK-21P61565 698 aa3.46□□□□□ -1.86
HMGB1P24-202ENST00000615653 BLOC1S1P78537 153 aa3.46□□□□□ -1.86
HMGB1P24-202ENST00000615653 FOXI1Q12951 378 aa3.46□□□□□ -1.86
HMGB1P24-202ENST00000615653 KLF1Q13351 362 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P24-202ENST00000615653 TOR2AQ5JU69 321 aa3.46□□□□□ -1.86
HMGB1P24-202ENST00000615653 MFSD14BQ5SR56 506 aa3.46□□□□□ -1.86
HMGB1P24-202ENST00000615653 RNF187Q5TA31 235 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P24-202ENST00000615653 XYLT1Q86Y38 959 aa3.46□□□□□ -1.86
HMGB1P24-202ENST00000615653 AMOTL1Q8IY63 956 aa3.46□□□□□ -1.86
HMGB1P24-202ENST00000615653 TGFBRAP1Q8WUH2 860 aa3.46□□□□□ -1.86
HMGB1P24-202ENST00000615653 HOXB13Q92826 284 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P24-202ENST00000615653 CYFIP2Q96F07 1278 aa3.46□□□□□ -1.86
HMGB1P24-202ENST00000615653 CEP95Q96GE4 821 aa3.46□□□□□ -1.86
HMGB1P24-202ENST00000615653 UHRF1Q96T88 793 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P24-202ENST00000615653 REXO4Q9GZR2 422 aaKnown RBP3.46□□□□□ -1.86
HMGB1P24-202ENST00000615653 PUS7LQ9H0K6 701 aaKnown RBP3.46□□□□□ -1.86
HMGB1P24-202ENST00000615653 VTA1Q9NP79 307 aa3.46□□□□□ -1.86
HMGB1P24-202ENST00000615653 DNAJC28Q9NX36 388 aa3.46□□□□□ -1.86
HMGB1P24-202ENST00000615653 TRPM5Q9NZQ8 1165 aa3.46□□□□□ -1.86
HMGB1P24-202ENST00000615653 GPR45Q9Y5Y3 372 aa3.46□□□□□ -1.86
HMGB1P24-202ENST00000615653 ZMYM3Q14202 1370 aa3.46□□□□□ -1.86
HMGB1P24-202ENST00000615653 PLEKHD1A6NEE1 506 aa3.45□□□□□ -1.86
HMGB1P24-202ENST00000615653 CGB1A6NKQ9 187 aa3.45□□□□□ -1.86
HMGB1P24-202ENST00000615653 CXorf49A8MYA2 514 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P24-202ENST00000615653 LPXNO60711 386 aa3.45□□□□□ -1.86
HMGB1P24-202ENST00000615653 ADSLP30566 484 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P24-202ENST00000615653 CCKBRP32239 447 aa3.45□□□□□ -1.86
HMGB1P24-202ENST00000615653 GUCY1A2P33402 732 aa3.45□□□□□ -1.86
HMGB1P24-202ENST00000615653 SREBF1P36956 1147 aa3.45□□□□□ -1.86
HMGB1P24-202ENST00000615653 PER3P56645 1201 aa3.45□□□□□ -1.86
HMGB1P24-202ENST00000615653 RNASE9P60153 205 aaKnown RBP3.45□□□□□ -1.86
HMGB1P24-202ENST00000615653 SRSF2Q01130 221 aaKnown RBP3.45□□□□□ -1.86
HMGB1P24-202ENST00000615653 NHLH2Q02577 135 aa3.45□□□□□ -1.86
HMGB1P24-202ENST00000615653 ATXN7L2Q5T6C5 722 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P24-202ENST00000615653 LHFPL2Q6ZUX7 228 aa3.45□□□□□ -1.86
HMGB1P24-202ENST00000615653 ARHGEF19Q8IW93 802 aa3.45□□□□□ -1.86
HMGB1P24-202ENST00000615653 RHOT2Q8IXI1 618 aa3.45□□□□□ -1.86
HMGB1P24-202ENST00000615653 LCORLQ8N3X6 602 aa3.45□□□□□ -1.86
HMGB1P24-202ENST00000615653 SENP6Q9GZR1 1112 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P24-202ENST00000615653 MANSC1Q9H8J5 431 aa3.45□□□□□ -1.86
HMGB1P24-202ENST00000615653 AKIP1Q9NQ31 210 aa3.45□□□□□ -1.86
HMGB1P24-202ENST00000615653 ZNF277Q9NRM2 450 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P24-202ENST00000615653 TMEM140Q9NV12 185 aa3.45□□□□□ -1.86
HMGB1P24-202ENST00000615653 FAM30AQ9NZY2 134 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms