RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 ARF4P18085 180 aaPredicted RBP3.69□□□□□ -1.82
LIG4-205ENST00000614526 TMOD1P28289 359 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 GJC1P36383 396 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 PAFAH1B1P43034 410 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 PDE6CP51160 858 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 GPC3P51654 580 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 EFNA5P52803 228 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 PTENP60484 403 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 NOP14P78316 857 aaKnown RBP3.69□□□□□ -1.82
LIG4-205ENST00000614526 HTRA3P83110 453 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 FMO1Q01740 532 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 MBTD1Q05BQ5 628 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 TFDP1Q14186 410 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 FAM47CQ5HY64 1035 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 MARCH8Q5T0T0 291 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 MTHFD1LQ6UB35 978 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 EFCAB13Q8IY85 973 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 FAM71AQ8IYT1 594 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 GPR161Q8N6U8 529 aaKnown RBP3.69□□□□□ -1.82
LIG4-205ENST00000614526 TPCN2Q8NHX9 752 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 MORC4Q8TE76 937 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 LMBR1Q8WVP7 490 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 CYFIP2Q96F07 1278 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 CDT1Q9H211 546 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 TMEM134Q9H6X4 195 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 GPBP1L1Q9HC44 474 aaPredicted RBP3.69□□□□□ -1.82
LIG4-205ENST00000614526 ABCB6Q9NP58 842 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 RBM12Q9NTZ6 932 aaKnown RBP3.69□□□□□ -1.82
LIG4-205ENST00000614526 KLK14Q9P0G3 267 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 CNTNAP2Q9UHC6 1331 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 FBXL5Q9UKA1 691 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 GABRQQ9UN88 632 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 POLIQ9UNA4 740 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 LAMA2P24043 3122 aaKnown RBP3.69□□□□□ -1.82
LIG4-205ENST00000614526 ADGRA2Q96PE1 1338 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 MYADML2A6NDP7 307 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 SLC15A5A6NIM6 579 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 LACTBL1A8MY62 500 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 PIK3R2O00459 728 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 OGTO15294 1046 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 P4HA2O15460 535 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 TREHO43280 583 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 THAP12O43422 761 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 ERLIN2O94905 339 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 LDHAP00338 332 aaKnown RBP3.69□□□□□ -1.82
LIG4-205ENST00000614526 CTSHP09668 335 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 STAG3L1P0CL83 205 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 AKAP5P24588 427 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 SSR1P43307 286 aaKnown RBP3.69□□□□□ -1.82
LIG4-205ENST00000614526 PSMC4P43686 418 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 MARCKSL1P49006 195 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 SNRPFP62306 86 aaKnown RBP3.69□□□□□ -1.82
LIG4-205ENST00000614526 CAP1Q01518 475 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 KIF22Q14807 665 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 TRADDQ15628 312 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 WDR72Q3MJ13 1102 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 MPZL3Q6UWV2 235 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 RUFY4Q6ZNE9 571 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 SESTD1Q86VW0 696 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 RNF10Q8N5U6 811 aaKnown RBP3.69□□□□□ -1.82
LIG4-205ENST00000614526 SPATA4Q8NEY3 305 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 GTF3C2Q8WUA4 911 aaPredicted RBP3.69□□□□□ -1.82
LIG4-205ENST00000614526 SHC3Q92529 594 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 RABGGTAQ92696 567 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 ZNF653Q96CK0 615 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 MAP7D2Q96T17 732 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 KRT12Q99456 494 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 IMPG2Q9BZV3 1241 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 CCDC113Q9H0I3 377 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 RPF1Q9H9Y2 349 aaKnown RBP3.69□□□□□ -1.82
LIG4-205ENST00000614526 KIAA1586Q9HCI6 787 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 PRDM10Q9NQV6 1147 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 DMGDHQ9UI17 866 aaKnown RBP3.69□□□□□ -1.82
LIG4-205ENST00000614526 ANO9A1A5B4 782 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 MANSC4A6NHS7 340 aaPredicted RBP3.69□□□□□ -1.82
LIG4-205ENST00000614526 MAPK13O15264 365 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 ITGB3P05106 788 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 ATXN8OSP0DMR3 200 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 SMIM10L2AP0DMW4 78 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 SMIM10L2BP0DMW5 78 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 MYBL2P10244 700 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 CYP2C9P11712 490 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 CD19P15391 556 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 ELNP15502 786 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 H2AFXP16104 143 aaPredicted RBP3.69□□□□□ -1.82
LIG4-205ENST00000614526 TNNT3P45378 269 aaPredicted RBP3.69□□□□□ -1.82
LIG4-205ENST00000614526 PHKA2P46019 1235 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 SLC26A2P50443 739 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 PPARDQ03181 441 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 CUL2Q13617 745 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 DUOXA2Q1HG44 320 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 ZNF484Q5JVG2 852 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 GNASQ5JWF2 1037 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 MEI1Q5TIA1 1274 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 IQSEC1Q6DN90 963 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 JADE1Q6IE81 842 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 C17orf99Q6UX52 265 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 CXCL17Q6UXB2 119 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 ZPBP2Q6X784 338 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 ZNF662Q6ZS27 426 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms