RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 CTXN1P60606 82 aa6.66□□□□□ -1.34
SCAMP1-205ENST00000614488 TARDBPQ13148 414 aaKnown RBP eCLIP6.66□□□□□ -1.34
SCAMP1-205ENST00000614488 DACT2Q5SW24 774 aa6.66□□□□□ -1.34
SCAMP1-205ENST00000614488 AGAP9Q5VTM2 703 aa6.66□□□□□ -1.34
SCAMP1-205ENST00000614488 LRRC55Q6ZSA7 311 aa6.66□□□□□ -1.34
SCAMP1-205ENST00000614488 RHOT2Q8IXI1 618 aa6.66□□□□□ -1.34
SCAMP1-205ENST00000614488 DDX56Q9NY93 547 aaKnown RBP6.66□□□□□ -1.34
SCAMP1-205ENST00000614488 SERPINB13Q9UIV8 391 aa6.66□□□□□ -1.34
SCAMP1-205ENST00000614488 LIMCH1Q9UPQ0 1083 aa6.66□□□□□ -1.34
SCAMP1-205ENST00000614488 CFAP20Q9Y6A4 193 aaKnown RBP6.66□□□□□ -1.34
SCAMP1-205ENST00000614488 RPS6KA4O75676 772 aa6.65□□□□□ -1.34
SCAMP1-205ENST00000614488 RPLP2P05387 115 aaKnown RBP6.65□□□□□ -1.34
SCAMP1-205ENST00000614488 ITGB1P05556 798 aa6.65□□□□□ -1.34
SCAMP1-205ENST00000614488 PTTG1IPP53801 180 aa6.65□□□□□ -1.34
SCAMP1-205ENST00000614488 RAB39AQ14964 217 aa6.65□□□□□ -1.34
SCAMP1-205ENST00000614488 UAP1L1Q3KQV9 507 aa6.65□□□□□ -1.34
SCAMP1-205ENST00000614488 C3orf36Q3SXR2 165 aa6.65□□□□□ -1.34
SCAMP1-205ENST00000614488 ZNF529Q6P280 563 aa6.65□□□□□ -1.34
SCAMP1-205ENST00000614488 MRGPREQ86SM8 312 aa6.65□□□□□ -1.34
SCAMP1-205ENST00000614488 RSPH3Q86UC2 560 aa6.65□□□□□ -1.34
SCAMP1-205ENST00000614488 CMTR2Q8IYT2 770 aaKnown RBP6.65□□□□□ -1.34
SCAMP1-205ENST00000614488 MIER2Q8N344 545 aa6.65□□□□□ -1.34
SCAMP1-205ENST00000614488 CLIP3Q96DZ5 547 aa6.65□□□□□ -1.34
SCAMP1-205ENST00000614488 MYEOVQ96EZ4 313 aa6.65□□□□□ -1.34
SCAMP1-205ENST00000614488 TMX3Q96JJ7 454 aa6.65□□□□□ -1.34
SCAMP1-205ENST00000614488 NEU1Q99519 415 aa6.65□□□□□ -1.34
SCAMP1-205ENST00000614488 REXO4Q9GZR2 422 aaKnown RBP6.65□□□□□ -1.34
SCAMP1-205ENST00000614488 C11orf54Q9H0W9 315 aaPredicted RBP6.65□□□□□ -1.34
SCAMP1-205ENST00000614488 PCED1AQ9H1Q7 454 aa6.65□□□□□ -1.34
SCAMP1-205ENST00000614488 ZNF768Q9H5H4 540 aaKnown RBP6.65□□□□□ -1.34
SCAMP1-205ENST00000614488 PCDHA13Q9Y5I0 950 aa6.65□□□□□ -1.34
SCAMP1-205ENST00000614488 ZNF185O15231 689 aa6.64□□□□□ -1.35
SCAMP1-205ENST00000614488 PDGFRBP09619 1106 aa6.64□□□□□ -1.35
SCAMP1-205ENST00000614488 LAG3P18627 525 aa6.64□□□□□ -1.35
SCAMP1-205ENST00000614488 ZFP36P26651 326 aaKnown RBP6.64□□□□□ -1.35
SCAMP1-205ENST00000614488 FAM189BP81408 668 aa6.64□□□□□ -1.35
SCAMP1-205ENST00000614488 UBXN2BQ14CS0 331 aa6.64□□□□□ -1.35
SCAMP1-205ENST00000614488 PDCD4Q53EL6 469 aaKnown RBP6.64□□□□□ -1.35
SCAMP1-205ENST00000614488 MED25Q71SY5 747 aa6.64□□□□□ -1.35
SCAMP1-205ENST00000614488 IFI44Q8TCB0 444 aa6.64□□□□□ -1.35
SCAMP1-205ENST00000614488 STAG1Q8WVM7 1258 aa6.64□□□□□ -1.35
SCAMP1-205ENST00000614488 CEP89Q96ST8 783 aa6.64□□□□□ -1.35
SCAMP1-205ENST00000614488 MYOCQ99972 504 aa6.64□□□□□ -1.35
SCAMP1-205ENST00000614488 TCF7L1Q9HCS4 588 aa6.64□□□□□ -1.35
SCAMP1-205ENST00000614488 AKIP1Q9NQ31 210 aa6.64□□□□□ -1.35
SCAMP1-205ENST00000614488 RUVBL1Q9Y265 456 aaKnown RBP6.64□□□□□ -1.35
SCAMP1-205ENST00000614488 HS3ST4Q9Y661 456 aa6.64□□□□□ -1.35
SCAMP1-205ENST00000614488 MARCH11A6NNE9 402 aa6.63□□□□□ -1.35
SCAMP1-205ENST00000614488 NCR1O76036 304 aa6.63□□□□□ -1.35
SCAMP1-205ENST00000614488 GCSHP23434 173 aa6.63□□□□□ -1.35
SCAMP1-205ENST00000614488 BMPR1AP36894 532 aa6.63□□□□□ -1.35
SCAMP1-205ENST00000614488 CREMQ03060 361 aa6.63□□□□□ -1.35
SCAMP1-205ENST00000614488 KLF10Q13118 480 aa6.63□□□□□ -1.35
SCAMP1-205ENST00000614488 IL10RAQ13651 578 aa6.63□□□□□ -1.35
SCAMP1-205ENST00000614488 BEAN1Q3B7T3 259 aa6.63□□□□□ -1.35
SCAMP1-205ENST00000614488 TIGD2Q4W5G0 525 aa6.63□□□□□ -1.35
SCAMP1-205ENST00000614488 CPA6Q8N4T0 437 aa6.63□□□□□ -1.35
SCAMP1-205ENST00000614488 DCBLD1Q8N8Z6 715 aa6.63□□□□□ -1.35
SCAMP1-205ENST00000614488 NLGN4YQ8NFZ3 816 aaPredicted RBP6.63□□□□□ -1.35
SCAMP1-205ENST00000614488 NSUN6Q8TEA1 469 aaKnown RBP6.63□□□□□ -1.35
SCAMP1-205ENST00000614488 MRGPRX4Q96LA9 322 aa6.63□□□□□ -1.35
SCAMP1-205ENST00000614488 FBXO34Q9NWN3 711 aa6.63□□□□□ -1.35
SCAMP1-205ENST00000614488 CALCOCO1Q9P1Z2 691 aa6.63□□□□□ -1.35
SCAMP1-205ENST00000614488 ATP11BQ9Y2G3 1177 aa6.63□□□□□ -1.35
SCAMP1-205ENST00000614488 USP15Q9Y4E8 981 aaPredicted RBP6.63□□□□□ -1.35
SCAMP1-205ENST00000614488 FPGT-TNNI3KV9GXZ4 949 aa6.63□□□□□ -1.35
SCAMP1-205ENST00000614488 TMEM200CA6NKL6 621 aa6.62□□□□□ -1.35
SCAMP1-205ENST00000614488 DTNBO60941 627 aa6.62□□□□□ -1.35
SCAMP1-205ENST00000614488 ABHD16AO95870 558 aa6.62□□□□□ -1.35
SCAMP1-205ENST00000614488 HLA-DOAP06340 250 aa6.62□□□□□ -1.35
SCAMP1-205ENST00000614488 VCAM1P19320 739 aa6.62□□□□□ -1.35
SCAMP1-205ENST00000614488 LY6G5CQ5SRR4 150 aa6.62□□□□□ -1.35
SCAMP1-205ENST00000614488 KRTAP5-3Q6L8H2 238 aa6.62□□□□□ -1.35
SCAMP1-205ENST00000614488 ARMC6Q6NXE6 501 aa6.62□□□□□ -1.35
SCAMP1-205ENST00000614488 TTC7BQ86TV6 843 aa6.62□□□□□ -1.35
SCAMP1-205ENST00000614488 OR56A1Q8NGH5 318 aa6.62□□□□□ -1.35
SCAMP1-205ENST00000614488 KAT5Q92993 513 aa6.62□□□□□ -1.35
SCAMP1-205ENST00000614488 PHACTR3Q96KR7 559 aa6.62□□□□□ -1.35
SCAMP1-205ENST00000614488 SORCS2Q96PQ0 1159 aa6.62□□□□□ -1.35
SCAMP1-205ENST00000614488 KLHL11Q9NVR0 708 aa6.62□□□□□ -1.35
SCAMP1-205ENST00000614488 DKK2Q9UBU2 259 aa6.62□□□□□ -1.35
SCAMP1-205ENST00000614488 LUC7L2Q9Y383 392 aaKnown RBP6.62□□□□□ -1.35
SCAMP1-205ENST00000614488 ALDH1L1O75891 902 aa6.61□□□□□ -1.35
SCAMP1-205ENST00000614488 SLPIP03973 132 aa6.61□□□□□ -1.35
SCAMP1-205ENST00000614488 MXRA7P84157 204 aa6.61□□□□□ -1.35
SCAMP1-205ENST00000614488 TLE1Q04724 770 aa6.61□□□□□ -1.35
SCAMP1-205ENST00000614488 FHL2Q14192 279 aa6.61□□□□□ -1.35
SCAMP1-205ENST00000614488 PABPC1LQ4VXU2 614 aaKnown RBP6.61□□□□□ -1.35
SCAMP1-205ENST00000614488 KCNV1Q6PIU1 500 aa6.61□□□□□ -1.35
SCAMP1-205ENST00000614488 UBE3BQ7Z3V4 1068 aa6.61□□□□□ -1.35
SCAMP1-205ENST00000614488 ZFPM1Q8IX07 1006 aa6.61□□□□□ -1.35
SCAMP1-205ENST00000614488 ULK2Q8IYT8 1036 aa6.61□□□□□ -1.35
SCAMP1-205ENST00000614488 PROKR1Q8TCW9 393 aa6.61□□□□□ -1.35
SCAMP1-205ENST00000614488 NEU4Q8WWR8 484 aaPredicted RBP6.61□□□□□ -1.35
SCAMP1-205ENST00000614488 LARP4BQ92615 738 aaKnown RBP6.61□□□□□ -1.35
SCAMP1-205ENST00000614488 RAB24Q969Q5 203 aa6.61□□□□□ -1.35
SCAMP1-205ENST00000614488 HSPBAP1Q96EW2 488 aa6.61□□□□□ -1.35
SCAMP1-205ENST00000614488 CLPTM1LQ96KA5 538 aa6.61□□□□□ -1.35
SCAMP1-205ENST00000614488 NUP88Q99567 741 aaPredicted RBP6.61□□□□□ -1.35
SCAMP1-205ENST00000614488 PRRX2Q99811 253 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms