RNA–Protein interactions for RNA: ENST00000613455.4

CPNE9-205, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-205ENST00000613455 SNX27Q96L92 541 aa21.89■■□□□ 1.09
CPNE9-205ENST00000613455 LRRC53A6NM62 1247 aa21.88■■□□□ 1.09
CPNE9-205ENST00000613455 MGEA5O60502 916 aa21.88■■□□□ 1.09
CPNE9-205ENST00000613455 RECQL4O94761 1208 aa21.88■■□□□ 1.09
CPNE9-205ENST00000613455 HLA-DRAP01903 254 aa21.88■■□□□ 1.09
CPNE9-205ENST00000613455 SKILP12757 684 aa21.88■■□□□ 1.09
CPNE9-205ENST00000613455 SELPP16109 830 aa21.88■■□□□ 1.09
CPNE9-205ENST00000613455 TFAMQ00059 246 aaKnown RBP21.88■■□□□ 1.09
CPNE9-205ENST00000613455 BFSP2Q13515 415 aa21.88■■□□□ 1.09
CPNE9-205ENST00000613455 DSC3Q14574 896 aa21.88■■□□□ 1.09
CPNE9-205ENST00000613455 DUOXA2Q1HG44 320 aa21.88■■□□□ 1.09
CPNE9-205ENST00000613455 SCARA3Q6AZY7 606 aa21.88■■□□□ 1.09
CPNE9-205ENST00000613455 JADE1Q6IE81 842 aa21.88■■□□□ 1.09
CPNE9-205ENST00000613455 IQCEQ6IPM2 695 aa21.88■■□□□ 1.09
CPNE9-205ENST00000613455 PDXDC1Q6P996 788 aa21.88■■□□□ 1.09
CPNE9-205ENST00000613455 RRAGAQ7L523 313 aa21.88■■□□□ 1.09
CPNE9-205ENST00000613455 CCDC112Q8NEF3 446 aa21.88■■□□□ 1.09
CPNE9-205ENST00000613455 ZNF397Q8NF99 534 aaPredicted RBP21.88■■□□□ 1.09
CPNE9-205ENST00000613455 CXCL16Q9H2A7 254 aa21.88■■□□□ 1.09
CPNE9-205ENST00000613455 PYCARDQ9ULZ3 195 aa21.88■■□□□ 1.09
CPNE9-205ENST00000613455 ZKSCAN5Q9Y2L8 839 aa21.88■■□□□ 1.09
CPNE9-205ENST00000613455 PITPNM1O00562 1244 aa21.87■■□□□ 1.09
CPNE9-205ENST00000613455 TLR3O15455 904 aaKnown RBP21.87■■□□□ 1.09
CPNE9-205ENST00000613455 PIK3CAP42336 1068 aa21.87■■□□□ 1.09
CPNE9-205ENST00000613455 WDR59Q6PJI9 974 aa21.87■■□□□ 1.09
CPNE9-205ENST00000613455 TRAPPC11Q7Z392 1133 aa21.87■■□□□ 1.09
CPNE9-205ENST00000613455 ARHGEF19Q8IW93 802 aa21.87■■□□□ 1.09
CPNE9-205ENST00000613455 TOX2Q96NM4 488 aa21.87■■□□□ 1.09
CPNE9-205ENST00000613455 BAG1Q99933 345 aaPredicted RBP21.87■■□□□ 1.09
CPNE9-205ENST00000613455 MCOLN1Q9GZU1 580 aa21.87■■□□□ 1.09
CPNE9-205ENST00000613455 RNF39Q9H2S5 420 aa21.87■■□□□ 1.09
CPNE9-205ENST00000613455 PLEKHA5Q9HAU0 1116 aa21.87■■□□□ 1.09
CPNE9-205ENST00000613455 PCDHB2Q9Y5E7 798 aa21.87■■□□□ 1.09
CPNE9-205ENST00000613455 TMEM191BP0C7N4 346 aa21.86■■□□□ 1.09
CPNE9-205ENST00000613455 AKAP5P24588 427 aa21.86■■□□□ 1.09
CPNE9-205ENST00000613455 HNRNPH3P31942 346 aaKnown RBP21.86■■□□□ 1.09
CPNE9-205ENST00000613455 JAM2P57087 298 aa21.86■■□□□ 1.09
CPNE9-205ENST00000613455 FAAP100Q0VG06 881 aa21.86■■□□□ 1.09
CPNE9-205ENST00000613455 MEA1Q16626 185 aa21.86■■□□□ 1.09
CPNE9-205ENST00000613455 ALKAL1Q6UXT8 129 aa21.86■■□□□ 1.09
CPNE9-205ENST00000613455 PAWRQ96IZ0 340 aaKnown RBP21.86■■□□□ 1.09
CPNE9-205ENST00000613455 PI4K2AQ9BTU6 479 aa21.86■■□□□ 1.09
CPNE9-205ENST00000613455 APOL6Q9BWW8 343 aa21.86■■□□□ 1.09
CPNE9-205ENST00000613455 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.86■■□□□ 1.09
CPNE9-205ENST00000613455 FAM105AQ9NUU6 356 aa21.86■■□□□ 1.09
CPNE9-205ENST00000613455 UMODL1Q5DID0 1318 aa21.86■■□□□ 1.09
CPNE9-205ENST00000613455 RFX1P22670 979 aa21.86■■□□□ 1.09
CPNE9-205ENST00000613455 TLE2Q04725 743 aa21.86■■□□□ 1.09
CPNE9-205ENST00000613455 CD302Q8IX05 232 aa21.86■■□□□ 1.09
CPNE9-205ENST00000613455 ELMO3Q96BJ8 720 aa21.86■■□□□ 1.09
CPNE9-205ENST00000613455 ANKRD36BP1Q96IX9 119 aa21.86■■□□□ 1.09
CPNE9-205ENST00000613455 TRAIPQ9BWF2 469 aa21.86■■□□□ 1.09
CPNE9-205ENST00000613455 C11orf49Q9H6J7 331 aa21.86■■□□□ 1.09
CPNE9-205ENST00000613455 DNAJC12Q9UKB3 198 aa21.86■■□□□ 1.09
CPNE9-205ENST00000613455 PLAGL2Q9UPG8 496 aa21.86■■□□□ 1.09
CPNE9-205ENST00000613455 C2CD2Q9Y426 696 aa21.86■■□□□ 1.09
CPNE9-205ENST00000613455 DAAM1Q9Y4D1 1078 aa21.86■■□□□ 1.09
CPNE9-205ENST00000613455 DCDC2CA8MYV0 355 aa21.85■■□□□ 1.09
CPNE9-205ENST00000613455 ZSCAN20P17040 1043 aaPredicted RBP21.85■■□□□ 1.09
CPNE9-205ENST00000613455 YARSP54577 528 aaKnown RBP21.85■■□□□ 1.09
CPNE9-205ENST00000613455 NCOA4Q13772 614 aa21.85■■□□□ 1.09
CPNE9-205ENST00000613455 GPNMBQ14956 572 aa21.85■■□□□ 1.09
CPNE9-205ENST00000613455 TMEM132DQ14C87 1099 aa21.85■■□□□ 1.09
CPNE9-205ENST00000613455 TMEM130Q8N3G9 435 aa21.85■■□□□ 1.09
CPNE9-205ENST00000613455 ZMAT2Q96NC0 199 aaKnown RBP21.85■■□□□ 1.09
CPNE9-205ENST00000613455 TMEM106CQ9BVX2 250 aa21.85■■□□□ 1.09
CPNE9-205ENST00000613455 IFIH1Q9BYX4 1025 aaKnown RBP21.85■■□□□ 1.09
CPNE9-205ENST00000613455 CNTN3Q9P232 1028 aa21.85■■□□□ 1.09
CPNE9-205ENST00000613455 MKI67P46013 3256 aaKnown RBP21.84■■□□□ 1.09
CPNE9-205ENST00000613455 NBNO60934 754 aa21.84■■□□□ 1.09
CPNE9-205ENST00000613455 ZC3H11AO75152 810 aaKnown RBP eCLIP21.84■■□□□ 1.09
CPNE9-205ENST00000613455 TNNC2P02585 160 aa21.84■■□□□ 1.09
CPNE9-205ENST00000613455 RAPGEF1Q13905 1077 aa21.84■■□□□ 1.09
CPNE9-205ENST00000613455 XKR4Q5GH76 650 aa21.84■■□□□ 1.09
CPNE9-205ENST00000613455 NT5DC4Q86YG4 428 aa21.84■■□□□ 1.09
CPNE9-205ENST00000613455 C1orf127Q8N9H9 656 aa21.84■■□□□ 1.09
CPNE9-205ENST00000613455 HELQQ8TDG4 1101 aa21.84■■□□□ 1.09
CPNE9-205ENST00000613455 NT5C1BQ96P26 610 aa21.84■■□□□ 1.09
CPNE9-205ENST00000613455 GPR88Q9GZN0 384 aa21.84■■□□□ 1.09
CPNE9-205ENST00000613455 SIX4Q9UIU6 781 aa21.84■■□□□ 1.09
CPNE9-205ENST00000613455 MYO6Q9UM54 1294 aa21.84■■□□□ 1.09
CPNE9-205ENST00000613455 SCN5AQ14524 2016 aa21.84■■□□□ 1.09
CPNE9-205ENST00000613455 MEIS3P2A8K0S8 358 aa21.83■■□□□ 1.09
CPNE9-205ENST00000613455 PHACTR2O75167 634 aa21.83■■□□□ 1.09
CPNE9-205ENST00000613455 CST3P01034 146 aaPredicted RBP21.83■■□□□ 1.09
CPNE9-205ENST00000613455 ZSCAN30Q86W11 494 aa21.83■■□□□ 1.09
CPNE9-205ENST00000613455 GPIHBP1Q8IV16 184 aa21.83■■□□□ 1.09
CPNE9-205ENST00000613455 CXorf38Q8TB03 319 aa21.83■■□□□ 1.09
CPNE9-205ENST00000613455 SYN2Q92777 582 aaPredicted RBP21.83■■□□□ 1.09
CPNE9-205ENST00000613455 KAT5Q92993 513 aa21.83■■□□□ 1.09
CPNE9-205ENST00000613455 KIF12Q96FN5 646 aa21.83■■□□□ 1.09
CPNE9-205ENST00000613455 SPAG5Q96R06 1193 aa21.83■■□□□ 1.09
CPNE9-205ENST00000613455 ADAM2Q99965 735 aa21.83■■□□□ 1.09
CPNE9-205ENST00000613455 STK33Q9BYT3 514 aa21.83■■□□□ 1.09
CPNE9-205ENST00000613455 NUCKS1Q9H1E3 243 aaKnown RBP21.83■■□□□ 1.09
CPNE9-205ENST00000613455 HIPK3Q9H422 1215 aa21.83■■□□□ 1.09
CPNE9-205ENST00000613455 UBE2TQ9NPD8 197 aaPredicted RBP21.83■■□□□ 1.09
CPNE9-205ENST00000613455 F8VZ95 297 aa21.83■■□□□ 1.08
CPNE9-205ENST00000613455 NRDCO43847 1150 aa21.83■■□□□ 1.08
CPNE9-205ENST00000613455 DRAP1Q14919 205 aaPredicted RBP21.83■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms