RNA–Protein interactions for RNA: ENST00000612927.1

PCDHGA4-202, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA4, Length 2,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-202ENST00000612927 PAPPA2Q9BXP8 1791 aa13.53□□□□□ -0.24
PCDHGA4-202ENST00000612927 CCDC188H7C350 402 aa13.53□□□□□ -0.24
PCDHGA4-202ENST00000612927 KRIT1O00522 736 aa13.53□□□□□ -0.24
PCDHGA4-202ENST00000612927 PSAPP07602 524 aa13.53□□□□□ -0.24
PCDHGA4-202ENST00000612927 SP2Q02086 613 aa13.53□□□□□ -0.24
PCDHGA4-202ENST00000612927 KIF22Q14807 665 aa13.53□□□□□ -0.24
PCDHGA4-202ENST00000612927 KRT71Q3SY84 523 aa13.53□□□□□ -0.24
PCDHGA4-202ENST00000612927 EPC2Q52LR7 807 aa13.53□□□□□ -0.24
PCDHGA4-202ENST00000612927 DCAF12L1Q5VU92 463 aa13.53□□□□□ -0.24
PCDHGA4-202ENST00000612927 AP1ARQ63HQ0 302 aa13.53□□□□□ -0.24
PCDHGA4-202ENST00000612927 CAPRIN2Q6IMN6 1127 aaKnown RBP13.53□□□□□ -0.24
PCDHGA4-202ENST00000612927 TMC3Q7Z5M5 1100 aa13.53□□□□□ -0.24
PCDHGA4-202ENST00000612927 PIGWQ7Z7B1 504 aa13.53□□□□□ -0.24
PCDHGA4-202ENST00000612927 SYCE1Q8N0S2 351 aa13.53□□□□□ -0.24
PCDHGA4-202ENST00000612927 ATP6V0A1Q93050 837 aa13.53□□□□□ -0.24
PCDHGA4-202ENST00000612927 HES6Q96HZ4 224 aa13.53□□□□□ -0.24
PCDHGA4-202ENST00000612927 BTBD7Q9P203 1132 aa13.53□□□□□ -0.24
PCDHGA4-202ENST00000612927 CORO1CQ9ULV4 474 aaPredicted RBP13.53□□□□□ -0.24
PCDHGA4-202ENST00000612927 TBX20Q9UMR3 447 aa13.53□□□□□ -0.24
PCDHGA4-202ENST00000612927 PFASO15067 1338 aa13.53□□□□□ -0.24
PCDHGA4-202ENST00000612927 OTOFQ9HC10 1997 aa13.52□□□□□ -0.24
PCDHGA4-202ENST00000612927 SART1O43290 800 aaKnown RBP13.52□□□□□ -0.24
PCDHGA4-202ENST00000612927 SMNDC1O75940 238 aaKnown RBP eCLIP13.52□□□□□ -0.24
PCDHGA4-202ENST00000612927 MXI1P50539 228 aa13.52□□□□□ -0.24
PCDHGA4-202ENST00000612927 PRKCEQ02156 737 aa13.52□□□□□ -0.24
PCDHGA4-202ENST00000612927 ABHD15Q6UXT9 468 aa13.52□□□□□ -0.24
PCDHGA4-202ENST00000612927 OTUD6AQ7L8S5 288 aa13.52□□□□□ -0.24
PCDHGA4-202ENST00000612927 ADAT2Q7Z6V5 191 aaKnown RBP13.52□□□□□ -0.24
PCDHGA4-202ENST00000612927 HOOK3Q86VS8 718 aa13.52□□□□□ -0.24
PCDHGA4-202ENST00000612927 CCDC127Q96BQ5 260 aa13.52□□□□□ -0.24
PCDHGA4-202ENST00000612927 THOC1Q96FV9 657 aaKnown RBP13.52□□□□□ -0.24
PCDHGA4-202ENST00000612927 CDHR1Q96JP9 859 aa13.52□□□□□ -0.24
PCDHGA4-202ENST00000612927 FAM84AQ96KN4 292 aa13.52□□□□□ -0.24
PCDHGA4-202ENST00000612927 AGPAT1Q99943 283 aa13.52□□□□□ -0.24
PCDHGA4-202ENST00000612927 TMEM117Q9H0C3 514 aa13.52□□□□□ -0.24
PCDHGA4-202ENST00000612927 SEPT9Q9UHD8 586 aaPredicted RBP13.52□□□□□ -0.24
PCDHGA4-202ENST00000612927 AMACRQ9UHK6 382 aa13.52□□□□□ -0.24
PCDHGA4-202ENST00000612927 AMFRQ9UKV5 643 aa13.52□□□□□ -0.24
PCDHGA4-202ENST00000612927 SBF1O95248 1867 aa13.52□□□□□ -0.24
PCDHGA4-202ENST00000612927 WDR81Q562E7 1941 aa13.52□□□□□ -0.24
PCDHGA4-202ENST00000612927 ARID2Q68CP9 1835 aa13.52□□□□□ -0.25
PCDHGA4-202ENST00000612927 PTPRFP10586 1907 aa13.52□□□□□ -0.25
PCDHGA4-202ENST00000612927 SKAP2O75563 359 aaPredicted RBP13.52□□□□□ -0.25
PCDHGA4-202ENST00000612927 ADSSP30520 456 aa13.52□□□□□ -0.25
PCDHGA4-202ENST00000612927 INHBEP58166 350 aa13.52□□□□□ -0.25
PCDHGA4-202ENST00000612927 DMP1Q13316 513 aaPredicted RBP13.52□□□□□ -0.25
PCDHGA4-202ENST00000612927 PRPF4BQ13523 1007 aaKnown RBP13.52□□□□□ -0.25
PCDHGA4-202ENST00000612927 GNPTABQ3T906 1256 aa13.52□□□□□ -0.25
PCDHGA4-202ENST00000612927 LBX2Q6XYB7 198 aa13.52□□□□□ -0.25
PCDHGA4-202ENST00000612927 ZNF526Q8TF50 670 aaPredicted RBP13.52□□□□□ -0.25
PCDHGA4-202ENST00000612927 TCP11Q8WWU5 503 aa13.52□□□□□ -0.25
PCDHGA4-202ENST00000612927 POP1Q99575 1024 aaKnown RBP13.52□□□□□ -0.25
PCDHGA4-202ENST00000612927 SLITRK6Q9H5Y7 841 aa13.52□□□□□ -0.25
PCDHGA4-202ENST00000612927 KMT5AQ9NQR1 393 aa13.52□□□□□ -0.25
PCDHGA4-202ENST00000612927 XPNPEP1Q9NQW7 623 aa13.52□□□□□ -0.25
PCDHGA4-202ENST00000612927 ADARB2Q9NS39 739 aaKnown RBP13.52□□□□□ -0.25
PCDHGA4-202ENST00000612927 TOPORSQ9NS56 1045 aaPredicted RBP13.52□□□□□ -0.25
PCDHGA4-202ENST00000612927 NR2E1Q9Y466 385 aa13.52□□□□□ -0.25
PCDHGA4-202ENST00000612927 GOLGA6L10A0A0M3HER8 536 aa13.51□□□□□ -0.25
PCDHGA4-202ENST00000612927 DENND3A2RUS2 1198 aa13.51□□□□□ -0.25
PCDHGA4-202ENST00000612927 STAM2O75886 525 aa13.51□□□□□ -0.25
PCDHGA4-202ENST00000612927 CLTAP09496 248 aa13.51□□□□□ -0.25
PCDHGA4-202ENST00000612927 COPB2P35606 906 aa13.51□□□□□ -0.25
PCDHGA4-202ENST00000612927 PPATQ06203 517 aa13.51□□□□□ -0.25
PCDHGA4-202ENST00000612927 ZNF211Q13398 564 aaPredicted RBP13.51□□□□□ -0.25
PCDHGA4-202ENST00000612927 MAP4K3Q8IVH8 894 aa13.51□□□□□ -0.25
PCDHGA4-202ENST00000612927 ANKRD35Q8N283 1001 aa13.51□□□□□ -0.25
PCDHGA4-202ENST00000612927 CHST13Q8NET6 341 aa13.51□□□□□ -0.25
PCDHGA4-202ENST00000612927 SEC14L1Q92503 715 aa13.51□□□□□ -0.25
PCDHGA4-202ENST00000612927 IWS1Q96ST2 819 aa13.51□□□□□ -0.25
PCDHGA4-202ENST00000612927 CELF4Q9BZC1 486 aaKnown RBP13.51□□□□□ -0.25
PCDHGA4-202ENST00000612927 NEUROG2Q9H2A3 272 aa13.51□□□□□ -0.25
PCDHGA4-202ENST00000612927 KIF9Q9HAQ2 790 aa13.51□□□□□ -0.25
PCDHGA4-202ENST00000612927 ADGRA3Q8IWK6 1321 aa13.51□□□□□ -0.25
PCDHGA4-202ENST00000612927 ATMINO43313 823 aaPredicted RBP13.51□□□□□ -0.25
PCDHGA4-202ENST00000612927 LUC7L3O95232 432 aaKnown RBP13.51□□□□□ -0.25
PCDHGA4-202ENST00000612927 FGGP02679 453 aa13.51□□□□□ -0.25
PCDHGA4-202ENST00000612927 CCND1P24385 295 aa13.51□□□□□ -0.25
PCDHGA4-202ENST00000612927 SNRNP35Q16560 246 aaKnown RBP13.51□□□□□ -0.25
PCDHGA4-202ENST00000612927 MIS18BP1Q6P0N0 1132 aa13.51□□□□□ -0.25
PCDHGA4-202ENST00000612927 PNMA8AQ86V59 439 aaPredicted RBP13.51□□□□□ -0.25
PCDHGA4-202ENST00000612927 RPUSD2Q8IZ73 545 aaKnown RBP13.51□□□□□ -0.25
PCDHGA4-202ENST00000612927 RASGEF1CQ8N431 466 aa13.51□□□□□ -0.25
PCDHGA4-202ENST00000612927 SLC17A8Q8NDX2 589 aa13.51□□□□□ -0.25
PCDHGA4-202ENST00000612927 KIFAP3Q92845 792 aa13.51□□□□□ -0.25
PCDHGA4-202ENST00000612927 SEMA4DQ92854 862 aa13.51□□□□□ -0.25
PCDHGA4-202ENST00000612927 ANKRD27Q96NW4 1050 aa13.51□□□□□ -0.25
PCDHGA4-202ENST00000612927 PDLIM7Q9NR12 457 aa13.51□□□□□ -0.25
PCDHGA4-202ENST00000612927 FAM114A2Q9NRY5 505 aa13.51□□□□□ -0.25
PCDHGA4-202ENST00000612927 SAMD15Q9P1V8 674 aa13.51□□□□□ -0.25
PCDHGA4-202ENST00000612927 CSADQ9Y600 493 aa13.51□□□□□ -0.25
PCDHGA4-202ENST00000612927 A0A0G2JMZ2 1700 aa13.5□□□□□ -0.25
PCDHGA4-202ENST00000612927 DCDC2CA8MYV0 355 aa13.5□□□□□ -0.25
PCDHGA4-202ENST00000612927 DDX3YO15523 660 aaKnown RBP13.5□□□□□ -0.25
PCDHGA4-202ENST00000612927 SGPL1O95470 568 aa13.5□□□□□ -0.25
PCDHGA4-202ENST00000612927 SUPT20HL2P0C7V6 817 aa13.5□□□□□ -0.25
PCDHGA4-202ENST00000612927 SNRPFP62306 86 aaKnown RBP13.5□□□□□ -0.25
PCDHGA4-202ENST00000612927 CETN1Q12798 172 aa13.5□□□□□ -0.25
PCDHGA4-202ENST00000612927 SLC39A4Q6P5W5 647 aa13.5□□□□□ -0.25
PCDHGA4-202ENST00000612927 GADL1Q6ZQY3 521 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms