RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 VAMP7P51809 220 aa11.54□□□□□ -0.56
FAM3A-221ENST00000612856 MFAP3P55082 362 aa11.54□□□□□ -0.56
FAM3A-221ENST00000612856 LAMC2Q13753 1193 aa11.54□□□□□ -0.56
FAM3A-221ENST00000612856 FAM153CQ494X1 144 aa11.54□□□□□ -0.56
FAM3A-221ENST00000612856 SEL1L2Q5TEA6 688 aa11.54□□□□□ -0.56
FAM3A-221ENST00000612856 DDX42Q86XP3 938 aaKnown RBP eCLIP11.54□□□□□ -0.56
FAM3A-221ENST00000612856 CCDC105Q8IYK2 499 aa11.54□□□□□ -0.56
FAM3A-221ENST00000612856 FBF1Q8TES7 1133 aa11.54□□□□□ -0.56
FAM3A-221ENST00000612856 AP1M1Q9BXS5 423 aa11.54□□□□□ -0.56
FAM3A-221ENST00000612856 FAM153AQ9UHL3 310 aa11.54□□□□□ -0.56
FAM3A-221ENST00000612856 ATP8A1Q9Y2Q0 1164 aa11.54□□□□□ -0.56
FAM3A-221ENST00000612856 PDS5AQ29RF7 1337 aaKnown RBP11.54□□□□□ -0.56
FAM3A-221ENST00000612856 hCG_2014768A0A024R1R8 64 aa11.54□□□□□ -0.56
FAM3A-221ENST00000612856 TARSL2A2RTX5 802 aaKnown RBP11.54□□□□□ -0.56
FAM3A-221ENST00000612856 KIF3CO14782 793 aa11.54□□□□□ -0.56
FAM3A-221ENST00000612856 HUS1O60921 280 aa11.54□□□□□ -0.56
FAM3A-221ENST00000612856 PPP1R11O60927 126 aaPredicted RBP11.54□□□□□ -0.56
FAM3A-221ENST00000612856 OATP04181 439 aa11.54□□□□□ -0.56
FAM3A-221ENST00000612856 ITGB5P18084 799 aa11.54□□□□□ -0.56
FAM3A-221ENST00000612856 SREBF1P36956 1147 aa11.54□□□□□ -0.56
FAM3A-221ENST00000612856 SCTRP47872 440 aa11.54□□□□□ -0.56
FAM3A-221ENST00000612856 GRB10Q13322 594 aa11.54□□□□□ -0.56
FAM3A-221ENST00000612856 RPS6KA1Q15418 735 aa11.54□□□□□ -0.56
FAM3A-221ENST00000612856 SLC30A9Q6PML9 568 aa11.54□□□□□ -0.56
FAM3A-221ENST00000612856 METTL23Q86XA0 190 aa11.54□□□□□ -0.56
FAM3A-221ENST00000612856 L3MBTL3Q96JM7 780 aaPredicted RBP11.54□□□□□ -0.56
FAM3A-221ENST00000612856 OSBPL9Q96SU4 736 aa11.54□□□□□ -0.56
FAM3A-221ENST00000612856 FERMT1Q9BQL6 677 aa11.54□□□□□ -0.56
FAM3A-221ENST00000612856 RWDD2AQ9UIY3 292 aa11.54□□□□□ -0.56
FAM3A-221ENST00000612856 PTPN22Q9Y2R2 807 aa11.54□□□□□ -0.56
FAM3A-221ENST00000612856 PPP2R3BQ9Y5P8 575 aa11.54□□□□□ -0.56
FAM3A-221ENST00000612856 DDX60Q8IY21 1712 aaKnown RBP11.54□□□□□ -0.56
FAM3A-221ENST00000612856 CCDC189A1A4V9 331 aa11.54□□□□□ -0.56
FAM3A-221ENST00000612856 MEIS2O14770 477 aa11.54□□□□□ -0.56
FAM3A-221ENST00000612856 POMCP01189 267 aa11.54□□□□□ -0.56
FAM3A-221ENST00000612856 SP100P23497 879 aaPredicted RBP11.54□□□□□ -0.56
FAM3A-221ENST00000612856 GABPAQ06546 454 aa11.54□□□□□ -0.56
FAM3A-221ENST00000612856 PPIL2Q13356 520 aa11.54□□□□□ -0.56
FAM3A-221ENST00000612856 LONP2Q86WA8 852 aa11.54□□□□□ -0.56
FAM3A-221ENST00000612856 CBWD2Q8IUF1 395 aa11.54□□□□□ -0.56
FAM3A-221ENST00000612856 SLC30A5Q8TAD4 765 aa11.54□□□□□ -0.56
FAM3A-221ENST00000612856 ZBTB45Q96K62 511 aaPredicted RBP11.54□□□□□ -0.56
FAM3A-221ENST00000612856 TINF2Q9BSI4 451 aa11.54□□□□□ -0.56
FAM3A-221ENST00000612856 SIK2Q9H0K1 926 aa11.54□□□□□ -0.56
FAM3A-221ENST00000612856 CYP26B1Q9NR63 512 aa11.54□□□□□ -0.56
FAM3A-221ENST00000612856 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.53□□□□□ -0.56
FAM3A-221ENST00000612856 ZC3H11AO75152 810 aaKnown RBP eCLIP11.53□□□□□ -0.56
FAM3A-221ENST00000612856 CYP11B2P19099 503 aa11.53□□□□□ -0.56
FAM3A-221ENST00000612856 KCNA3P22001 575 aa11.53□□□□□ -0.56
FAM3A-221ENST00000612856 SARSP49591 514 aaKnown RBP11.53□□□□□ -0.56
FAM3A-221ENST00000612856 RWDD2BP57060 319 aa11.53□□□□□ -0.56
FAM3A-221ENST00000612856 PDIA5Q14554 519 aa11.53□□□□□ -0.56
FAM3A-221ENST00000612856 FAM47EQ6ZV65 393 aa11.53□□□□□ -0.56
FAM3A-221ENST00000612856 CCDC60Q8IWA6 550 aaPredicted RBP11.53□□□□□ -0.56
FAM3A-221ENST00000612856 CEP120Q8N960 986 aa11.53□□□□□ -0.56
FAM3A-221ENST00000612856 LRRC45Q96CN5 670 aa11.53□□□□□ -0.56
FAM3A-221ENST00000612856 CCSER1Q9C0I3 900 aa11.53□□□□□ -0.56
FAM3A-221ENST00000612856 BCAS3Q9H6U6 928 aa11.53□□□□□ -0.56
FAM3A-221ENST00000612856 HMX1Q9NP08 348 aaPredicted RBP11.53□□□□□ -0.56
FAM3A-221ENST00000612856 RNF8O76064 485 aa11.53□□□□□ -0.56
FAM3A-221ENST00000612856 HMBSP08397 361 aa11.53□□□□□ -0.56
FAM3A-221ENST00000612856 SLC9A1P19634 815 aa11.53□□□□□ -0.56
FAM3A-221ENST00000612856 KRT81Q14533 505 aa11.53□□□□□ -0.56
FAM3A-221ENST00000612856 ZNF365Q70YC5 407 aa11.53□□□□□ -0.56
FAM3A-221ENST00000612856 RYBPQ8N488 228 aaPredicted RBP11.53□□□□□ -0.56
FAM3A-221ENST00000612856 CCNYQ8ND76 341 aa11.53□□□□□ -0.56
FAM3A-221ENST00000612856 ACAP3Q96P50 834 aa11.53□□□□□ -0.56
FAM3A-221ENST00000612856 TSGA10Q9BZW7 698 aa11.53□□□□□ -0.56
FAM3A-221ENST00000612856 HSPBP1Q9NZL4 362 aa11.53□□□□□ -0.56
FAM3A-221ENST00000612856 SNCAIPQ9Y6H5 919 aa11.53□□□□□ -0.56
FAM3A-221ENST00000612856 IKBKGQ9Y6K9 419 aa11.53□□□□□ -0.56
FAM3A-221ENST00000612856 SCAMP3O14828 347 aaKnown RBP11.53□□□□□ -0.56
FAM3A-221ENST00000612856 UBA1P22314 1058 aaKnown RBP11.53□□□□□ -0.56
FAM3A-221ENST00000612856 GPC3P51654 580 aa11.53□□□□□ -0.56
FAM3A-221ENST00000612856 NAALADL2Q58DX5 795 aa11.53□□□□□ -0.56
FAM3A-221ENST00000612856 IER5Q5VY09 327 aa11.53□□□□□ -0.56
FAM3A-221ENST00000612856 RIT2Q99578 217 aa11.53□□□□□ -0.56
FAM3A-221ENST00000612856 ABHD16BQ9H3Z7 469 aa11.53□□□□□ -0.56
FAM3A-221ENST00000612856 MAGEF1Q9HAY2 307 aa11.53□□□□□ -0.56
FAM3A-221ENST00000612856 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.53□□□□□ -0.56
FAM3A-221ENST00000612856 HBP1O60381 514 aa11.52□□□□□ -0.56
FAM3A-221ENST00000612856 STAM2O75886 525 aa11.52□□□□□ -0.56
FAM3A-221ENST00000612856 PLEKP08567 350 aaPredicted RBP11.52□□□□□ -0.56
FAM3A-221ENST00000612856 TRIP13Q15645 432 aaPredicted RBP11.52□□□□□ -0.56
FAM3A-221ENST00000612856 CCL14Q16627 93 aa11.52□□□□□ -0.56
FAM3A-221ENST00000612856 VSIG1Q86XK7 387 aa11.52□□□□□ -0.56
FAM3A-221ENST00000612856 SIX6OS1Q8N1H7 587 aa11.52□□□□□ -0.56
FAM3A-221ENST00000612856 ERLEC1Q96DZ1 483 aa11.52□□□□□ -0.56
FAM3A-221ENST00000612856 OSBPL1AQ9BXW6 950 aa11.52□□□□□ -0.56
FAM3A-221ENST00000612856 NSRP1Q9H0G5 558 aaKnown RBP11.52□□□□□ -0.56
FAM3A-221ENST00000612856 ZWILCHQ9H900 591 aa11.52□□□□□ -0.56
FAM3A-221ENST00000612856 DNAJC17Q9NVM6 304 aaKnown RBP11.52□□□□□ -0.56
FAM3A-221ENST00000612856 DUOX1Q9NRD9 1551 aa11.52□□□□□ -0.56
FAM3A-221ENST00000612856 LRRC53A6NM62 1247 aa11.52□□□□□ -0.57
FAM3A-221ENST00000612856 HMGB1P1B2RPK0 211 aaPredicted RBP11.52□□□□□ -0.57
FAM3A-221ENST00000612856 SNUPNO95149 360 aaKnown RBP11.52□□□□□ -0.57
FAM3A-221ENST00000612856 EEF1GP26641 437 aaKnown RBP11.52□□□□□ -0.57
FAM3A-221ENST00000612856 MTM1Q13496 603 aa11.52□□□□□ -0.57
FAM3A-221ENST00000612856 SPRYD7Q5W111 196 aa11.52□□□□□ -0.57
FAM3A-221ENST00000612856 ZC3H15Q8WU90 426 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms