RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 STAT2P52630 851 aa11.39□□□□□ -0.59
CNTNAP3B-211ENST00000612828 STX4Q12846 297 aa11.39□□□□□ -0.59
CNTNAP3B-211ENST00000612828 ACAP2Q15057 778 aa11.39□□□□□ -0.59
CNTNAP3B-211ENST00000612828 GATAD2AQ86YP4 633 aa11.39□□□□□ -0.59
CNTNAP3B-211ENST00000612828 SNX31Q8N9S9 440 aa11.39□□□□□ -0.59
CNTNAP3B-211ENST00000612828 KLHL8Q9P2G9 620 aaPredicted RBP11.39□□□□□ -0.59
CNTNAP3B-211ENST00000612828 SYNRGQ9UMZ2 1314 aa11.39□□□□□ -0.59
CNTNAP3B-211ENST00000612828 MSX1P28360 303 aa11.39□□□□□ -0.59
CNTNAP3B-211ENST00000612828 PDE6CP51160 858 aa11.39□□□□□ -0.59
CNTNAP3B-211ENST00000612828 NIM1KQ8IY84 436 aa11.39□□□□□ -0.59
CNTNAP3B-211ENST00000612828 PPP2R2CQ9Y2T4 447 aa11.39□□□□□ -0.59
CNTNAP3B-211ENST00000612828 SSH2Q76I76 1423 aa11.39□□□□□ -0.59
CNTNAP3B-211ENST00000612828 ZNF532Q9HCE3 1301 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 INO80B-WBP1J3KQ70 363 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 ACADMP11310 421 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 BRAFP15056 766 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 TRAF3Q13114 568 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 DMP1Q13316 513 aaPredicted RBP11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 PACS1Q6VY07 963 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 WDR36Q8NI36 951 aaKnown RBP11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 C19orf60Q96EN9 201 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 RBM41Q96IZ5 413 aaKnown RBP11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 INO80BQ9C086 356 aaPredicted RBP11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 NLRC4Q9NPP4 1024 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 ATG7O95352 703 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 PARNO95453 639 aaKnown RBP11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 TAC1P20366 129 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 MZF1P28698 734 aaPredicted RBP11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 SSTR3P32745 418 aaPredicted RBP11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 MORF4L2Q15014 288 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 PEG10Q86TG7 708 aaKnown RBP11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 ART5Q96L15 291 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 ACSL4O60488 711 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 CBLBQ13191 982 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 XKR9Q5GH70 373 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 AGBL2Q5U5Z8 902 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 ZNF611Q8N823 705 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 GGT7Q9UJ14 662 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 GGA2Q9UJY4 613 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 AP3B1O00203 1094 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 MAPK13O15264 365 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 HSPA4LO95757 839 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 CHRM1P11229 460 aaPredicted RBP11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 COPAP53621 1224 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 VSNL1P62760 191 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 RUNX1T1Q06455 604 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 ZNF699Q32M78 642 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 ANKRD40Q6AI12 368 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 TTC7BQ86TV6 843 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 MLKLQ8NB16 471 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 TRIM54Q9BYV2 358 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 KRIT1O00522 736 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 NOS3P29474 1203 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 GNAQP50148 359 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 CYTH1Q15438 398 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 DNAJC10Q8IXB1 793 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 PPM1KQ8N3J5 372 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 ZBTB8BQ8NAP8 495 aaPredicted RBP11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 STN1Q9H668 368 aaKnown RBP11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 SLC52A2Q9HAB3 445 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 AMFRQ9UKV5 643 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 SAMD9Q5K651 1589 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 C2orf71A6NGG8 1288 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 DEXIO95424 95 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 RALBP11234 206 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 LTKP29376 864 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 CBX5P45973 191 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 DLG1Q12959 904 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 TTC39BQ5VTQ0 682 aaPredicted RBP11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 CADPS2Q86UW7 1296 aa11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 NSUN7Q8NE18 718 aaKnown RBP11.38□□□□□ -0.59
CNTNAP3B-211ENST00000612828 TCP10L2B9ZVM9 353 aa11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 USF2Q15853 346 aaPredicted RBP11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 PDLIM2Q96JY6 352 aa11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 QKIQ96PU8 341 aaKnown RBP eCLIP11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 CNPPD1Q9BV87 410 aa11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 STK32BQ9NY57 414 aa11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 KLHL3Q9UH77 587 aa11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 RTCBQ9Y3I0 505 aaKnown RBP11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 K7ENM7 598 aa11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 ECEL1O95672 775 aa11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 S100GP29377 79 aa11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 SKIV2L2P42285 1042 aaKnown RBP11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 BTKQ06187 659 aa11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 NFYCQ13952 458 aa11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 RPS6KA1Q15418 735 aa11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 FAM172AQ8WUF8 416 aa11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 DHX38Q92620 1227 aaKnown RBP11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 VWA3BQ502W6 1294 aa11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 HAUS3Q68CZ6 603 aa11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 GRAMD1CQ8IYS0 662 aa11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 CLEC4FQ8N1N0 589 aa11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 SNX29Q8TEQ0 813 aa11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 PPP2R3CQ969Q6 453 aa11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 AIFM3Q96NN9 605 aa11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 FGAP02671 866 aa11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 ATP1A3P13637 1013 aa11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 ARL4AP40617 200 aa11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 HDLBPQ00341 1268 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms