RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 MTCL1Q9Y4B5 1905 aaKnown RBP19■□□□□ 0.63
PRKN-209ENST00000612485 NPHP3-ACAD11A0A0J9YXS1 232 aa18.99■□□□□ 0.63
PRKN-209ENST00000612485 KCNE1P15382 129 aa18.99■□□□□ 0.63
PRKN-209ENST00000612485 SCP2P22307 547 aa18.99■□□□□ 0.63
PRKN-209ENST00000612485 CACNB1Q02641 598 aaPredicted RBP18.99■□□□□ 0.63
PRKN-209ENST00000612485 ARSHQ5FYA8 562 aa18.99■□□□□ 0.63
PRKN-209ENST00000612485 GPBP1Q86WP2 473 aa18.99■□□□□ 0.63
PRKN-209ENST00000612485 ZBTB45Q96K62 511 aaPredicted RBP18.99■□□□□ 0.63
PRKN-209ENST00000612485 GOLGA2P5Q9HBQ8 144 aa18.99■□□□□ 0.63
PRKN-209ENST00000612485 CNTN3Q9P232 1028 aa18.99■□□□□ 0.63
PRKN-209ENST00000612485 IGSF9Q9P2J2 1179 aa18.99■□□□□ 0.63
PRKN-209ENST00000612485 PODXLO00592 558 aa18.98■□□□□ 0.63
PRKN-209ENST00000612485 CLDN3O15551 220 aa18.98■□□□□ 0.63
PRKN-209ENST00000612485 HNRNPA1P09651 372 aaKnown RBP eCLIP18.98■□□□□ 0.63
PRKN-209ENST00000612485 MATR3P43243 847 aaKnown RBP eCLIP18.98■□□□□ 0.63
PRKN-209ENST00000612485 NCKAP1LP55160 1127 aa18.98■□□□□ 0.63
PRKN-209ENST00000612485 NHLH1Q02575 133 aa18.98■□□□□ 0.63
PRKN-209ENST00000612485 SOX4Q06945 474 aaPredicted RBP18.98■□□□□ 0.63
PRKN-209ENST00000612485 TDGQ13569 410 aa18.98■□□□□ 0.63
PRKN-209ENST00000612485 ANKS3Q6ZW76 656 aa18.98■□□□□ 0.63
PRKN-209ENST00000612485 KCNN1Q92952 543 aa18.98■□□□□ 0.63
PRKN-209ENST00000612485 BICD1Q96G01 975 aa18.98■□□□□ 0.63
PRKN-209ENST00000612485 SMOC2Q9H3U7 446 aa18.98■□□□□ 0.63
PRKN-209ENST00000612485 KCNK12Q9HB15 430 aa18.98■□□□□ 0.63
PRKN-209ENST00000612485 EPS15L1Q9UBC2 864 aa18.98■□□□□ 0.63
PRKN-209ENST00000612485 MTRRQ9UBK8 725 aa18.98■□□□□ 0.63
PRKN-209ENST00000612485 WDFY4Q6ZS81 3184 aa18.97■□□□□ 0.63
PRKN-209ENST00000612485 MYH11P35749 1972 aa18.97■□□□□ 0.63
PRKN-209ENST00000612485 FAM13AO94988 1023 aa18.97■□□□□ 0.63
PRKN-209ENST00000612485 KRT18P05783 430 aaKnown RBP18.97■□□□□ 0.63
PRKN-209ENST00000612485 C8AP07357 584 aa18.97■□□□□ 0.63
PRKN-209ENST00000612485 PLCG1P19174 1290 aa18.97■□□□□ 0.63
PRKN-209ENST00000612485 AVPR2P30518 371 aa18.97■□□□□ 0.63
PRKN-209ENST00000612485 RPL9P32969 192 aaKnown RBP18.97■□□□□ 0.63
PRKN-209ENST00000612485 PTPN5P54829 565 aa18.97■□□□□ 0.63
PRKN-209ENST00000612485 VCPP55072 806 aaKnown RBP18.97■□□□□ 0.63
PRKN-209ENST00000612485 MCL1Q07820 350 aa18.97■□□□□ 0.63
PRKN-209ENST00000612485 RAB33AQ14088 237 aa18.97■□□□□ 0.63
PRKN-209ENST00000612485 DHX8Q14562 1220 aaKnown RBP18.97■□□□□ 0.63
PRKN-209ENST00000612485 KARSQ15046 597 aaKnown RBP18.97■□□□□ 0.63
PRKN-209ENST00000612485 PPM1LQ5SGD2 360 aa18.97■□□□□ 0.63
PRKN-209ENST00000612485 IER5LQ5T953 404 aa18.97■□□□□ 0.63
PRKN-209ENST00000612485 CD300LGQ6UXG3 332 aa18.97■□□□□ 0.63
PRKN-209ENST00000612485 HAUS6Q7Z4H7 955 aa18.97■□□□□ 0.63
PRKN-209ENST00000612485 C3orf58Q8NDZ4 430 aa18.97■□□□□ 0.63
PRKN-209ENST00000612485 RAD54LQ92698 747 aa18.97■□□□□ 0.63
PRKN-209ENST00000612485 ZMAT2Q96NC0 199 aaKnown RBP18.97■□□□□ 0.63
PRKN-209ENST00000612485 REEP2Q9BRK0 252 aa18.97■□□□□ 0.63
PRKN-209ENST00000612485 PARVGQ9HBI0 331 aa18.97■□□□□ 0.63
PRKN-209ENST00000612485 BLOC1S4Q9NUP1 217 aa18.97■□□□□ 0.63
PRKN-209ENST00000612485 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.97■□□□□ 0.63
PRKN-209ENST00000612485 BACE2Q9Y5Z0 518 aa18.97■□□□□ 0.63
PRKN-209ENST00000612485 ZDBF2Q9HCK1 2354 aa18.96■□□□□ 0.63
PRKN-209ENST00000612485 TRIP11Q15643 1979 aa18.96■□□□□ 0.63
PRKN-209ENST00000612485 ADAM12O43184 909 aa18.96■□□□□ 0.63
PRKN-209ENST00000612485 N4BP1O75113 896 aaKnown RBP18.96■□□□□ 0.63
PRKN-209ENST00000612485 PDGFBP01127 241 aaPredicted RBP18.96■□□□□ 0.63
PRKN-209ENST00000612485 IGFBP6P24592 240 aaPredicted RBP18.96■□□□□ 0.63
PRKN-209ENST00000612485 TKTP29401 623 aaKnown RBP18.96■□□□□ 0.63
PRKN-209ENST00000612485 HOXA9P31269 272 aa18.96■□□□□ 0.63
PRKN-209ENST00000612485 OR1D2P34982 312 aa18.96■□□□□ 0.63
PRKN-209ENST00000612485 BRCC3P46736 316 aa18.96■□□□□ 0.63
PRKN-209ENST00000612485 GRIN1Q05586 938 aa18.96■□□□□ 0.63
PRKN-209ENST00000612485 MCM6Q14566 821 aa18.96■□□□□ 0.63
PRKN-209ENST00000612485 UVSSAQ2YD98 709 aa18.96■□□□□ 0.63
PRKN-209ENST00000612485 RTL10Q7L3V2 364 aa18.96■□□□□ 0.63
PRKN-209ENST00000612485 MYCT1Q8N699 235 aa18.96■□□□□ 0.63
PRKN-209ENST00000612485 PRSS33Q8NF86 280 aa18.96■□□□□ 0.63
PRKN-209ENST00000612485 NXPE3Q969Y0 559 aa18.96■□□□□ 0.63
PRKN-209ENST00000612485 MYADMQ96S97 322 aa18.96■□□□□ 0.63
PRKN-209ENST00000612485 CCSER1Q9C0I3 900 aa18.96■□□□□ 0.63
PRKN-209ENST00000612485 DUSP12Q9UNI6 340 aa18.96■□□□□ 0.63
PRKN-209ENST00000612485 CDY1Q9Y6F8 540 aa18.96■□□□□ 0.63
PRKN-209ENST00000612485 I3L4J1 428 aa18.95■□□□□ 0.62
PRKN-209ENST00000612485 K7ENM7 598 aa18.95■□□□□ 0.62
PRKN-209ENST00000612485 XYLBO75191 536 aa18.95■□□□□ 0.62
PRKN-209ENST00000612485 ABCD1P33897 745 aa18.95■□□□□ 0.62
PRKN-209ENST00000612485 LIG4P49917 911 aa18.95■□□□□ 0.62
PRKN-209ENST00000612485 ZNF131P52739 623 aa18.95■□□□□ 0.62
PRKN-209ENST00000612485 NUBP1P53384 320 aa18.95■□□□□ 0.62
PRKN-209ENST00000612485 KYAT1Q16773 422 aa18.95■□□□□ 0.62
PRKN-209ENST00000612485 SLC10A6Q3KNW5 377 aa18.95■□□□□ 0.62
PRKN-209ENST00000612485 GET4Q7L5D6 327 aaPredicted RBP18.95■□□□□ 0.62
PRKN-209ENST00000612485 LRRC15Q8TF66 581 aa18.95■□□□□ 0.62
PRKN-209ENST00000612485 LARP4BQ92615 738 aaKnown RBP18.95■□□□□ 0.62
PRKN-209ENST00000612485 INTS4Q96HW7 963 aaKnown RBP18.95■□□□□ 0.62
PRKN-209ENST00000612485 BACH2Q9BYV9 841 aa18.95■□□□□ 0.62
PRKN-209ENST00000612485 MFSD1Q9H3U5 465 aa18.95■□□□□ 0.62
PRKN-209ENST00000612485 PLEKHA5Q9HAU0 1116 aa18.95■□□□□ 0.62
PRKN-209ENST00000612485 NUB1Q9Y5A7 615 aa18.95■□□□□ 0.62
PRKN-209ENST00000612485 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.95■□□□□ 0.62
PRKN-209ENST00000612485 VWA8A3KMH1 1905 aa18.95■□□□□ 0.62
PRKN-209ENST00000612485 SYN3O14994 580 aa18.94■□□□□ 0.62
PRKN-209ENST00000612485 TRAK2O60296 914 aa18.94■□□□□ 0.62
PRKN-209ENST00000612485 TBCAO75347 108 aaKnown RBP18.94■□□□□ 0.62
PRKN-209ENST00000612485 POU2F2P09086 479 aa18.94■□□□□ 0.62
PRKN-209ENST00000612485 CLTAP09496 248 aa18.94■□□□□ 0.62
PRKN-209ENST00000612485 SYT1P21579 422 aa18.94■□□□□ 0.62
PRKN-209ENST00000612485 FSHRP23945 695 aa18.94■□□□□ 0.62
PRKN-209ENST00000612485 SEZ6Q53EL9 994 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms