RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 KIAA1024Q9UPX6 916 aa14.68□□□□□ -0.06
HMGB1P24-201ENST00000611897 MRPS23Q9Y3D9 190 aaKnown RBP14.68□□□□□ -0.06
HMGB1P24-201ENST00000611897 ZFP37Q9Y6Q3 630 aaPredicted RBP14.68□□□□□ -0.06
HMGB1P24-201ENST00000611897 NOTCH4Q99466 2003 aa14.68□□□□□ -0.06
HMGB1P24-201ENST00000611897 FRYLO94915 3013 aa14.68□□□□□ -0.06
HMGB1P24-201ENST00000611897 OTOGLQ3ZCN5 2332 aa14.67□□□□□ -0.06
HMGB1P24-201ENST00000611897 GPR179Q6PRD1 2367 aa14.67□□□□□ -0.06
HMGB1P24-201ENST00000611897 K7ERI5 159 aa14.67□□□□□ -0.06
HMGB1P24-201ENST00000611897 SP9P0CG40 484 aa14.67□□□□□ -0.06
HMGB1P24-201ENST00000611897 CD72P21854 359 aa14.67□□□□□ -0.06
HMGB1P24-201ENST00000611897 HOXA9P31269 272 aa14.67□□□□□ -0.06
HMGB1P24-201ENST00000611897 PEX3P56589 373 aa14.67□□□□□ -0.06
HMGB1P24-201ENST00000611897 RAB33AQ14088 237 aa14.67□□□□□ -0.06
HMGB1P24-201ENST00000611897 ZRSR1Q15695 479 aaKnown RBP14.67□□□□□ -0.06
HMGB1P24-201ENST00000611897 MLF2Q15773 248 aaPredicted RBP14.67□□□□□ -0.06
HMGB1P24-201ENST00000611897 ECM1Q16610 540 aa14.67□□□□□ -0.06
HMGB1P24-201ENST00000611897 ZC3H14Q6PJT7 736 aaKnown RBP14.67□□□□□ -0.06
HMGB1P24-201ENST00000611897 RSPO2Q6UXX9 243 aaPredicted RBP14.67□□□□□ -0.06
HMGB1P24-201ENST00000611897 C1orf210Q8IVY1 113 aa14.67□□□□□ -0.06
HMGB1P24-201ENST00000611897 NPAS3Q8IXF0 933 aa14.67□□□□□ -0.06
HMGB1P24-201ENST00000611897 C3orf58Q8NDZ4 430 aa14.67□□□□□ -0.06
HMGB1P24-201ENST00000611897 MCRS1Q96EZ8 462 aa14.67□□□□□ -0.06
HMGB1P24-201ENST00000611897 DDX27Q96GQ7 796 aaKnown RBP14.67□□□□□ -0.06
HMGB1P24-201ENST00000611897 CDT1Q9H211 546 aa14.67□□□□□ -0.06
HMGB1P24-201ENST00000611897 SPATA6Q9NWH7 488 aaPredicted RBP14.67□□□□□ -0.06
HMGB1P24-201ENST00000611897 DNMT3BQ9UBC3 853 aaKnown RBP14.67□□□□□ -0.06
HMGB1P24-201ENST00000611897 LRWD1Q9UFC0 647 aa14.67□□□□□ -0.06
HMGB1P24-201ENST00000611897 DCHS1Q96JQ0 3298 aa14.67□□□□□ -0.06
HMGB1P24-201ENST00000611897 CEP250Q9BV73 2442 aa14.67□□□□□ -0.06
HMGB1P24-201ENST00000611897 FANCMQ8IYD8 2048 aa14.66□□□□□ -0.06
HMGB1P24-201ENST00000611897 MYH11P35749 1972 aa14.66□□□□□ -0.06
HMGB1P24-201ENST00000611897 PRRG1O14668 218 aa14.66□□□□□ -0.06
HMGB1P24-201ENST00000611897 TRAPPC3O43617 180 aa14.66□□□□□ -0.06
HMGB1P24-201ENST00000611897 PAPLNO95428 1278 aa14.66□□□□□ -0.06
HMGB1P24-201ENST00000611897 LRG1P02750 347 aa14.66□□□□□ -0.06
HMGB1P24-201ENST00000611897 GLULP15104 373 aa14.66□□□□□ -0.06
HMGB1P24-201ENST00000611897 FGFR3P22607 806 aa14.66□□□□□ -0.06
HMGB1P24-201ENST00000611897 ELF1P32519 619 aa14.66□□□□□ -0.06
HMGB1P24-201ENST00000611897 SOX4Q06945 474 aaPredicted RBP14.66□□□□□ -0.06
HMGB1P24-201ENST00000611897 DMP1Q13316 513 aaPredicted RBP14.66□□□□□ -0.06
HMGB1P24-201ENST00000611897 TPRG1Q6ZUI0 275 aa14.66□□□□□ -0.06
HMGB1P24-201ENST00000611897 ANKS3Q6ZW76 656 aa14.66□□□□□ -0.06
HMGB1P24-201ENST00000611897 PPP1R10Q96QC0 940 aaKnown RBP14.66□□□□□ -0.06
HMGB1P24-201ENST00000611897 TCHPQ9BT92 498 aa14.66□□□□□ -0.06
HMGB1P24-201ENST00000611897 BCO2Q9BYV7 579 aa14.66□□□□□ -0.06
HMGB1P24-201ENST00000611897 FOXP1Q9H334 677 aaPredicted RBP14.66□□□□□ -0.06
HMGB1P24-201ENST00000611897 TOPORSQ9NS56 1045 aaPredicted RBP14.66□□□□□ -0.06
HMGB1P24-201ENST00000611897 LIMCH1Q9UPQ0 1083 aa14.66□□□□□ -0.06
HMGB1P24-201ENST00000611897 NUB1Q9Y5A7 615 aa14.66□□□□□ -0.06
HMGB1P24-201ENST00000611897 PHLPP2Q6ZVD8 1323 aa14.66□□□□□ -0.06
HMGB1P24-201ENST00000611897 PATJQ8NI35 1801 aa14.65□□□□□ -0.06
HMGB1P24-201ENST00000611897 PP2D1A8MPX8 630 aa14.65□□□□□ -0.06
HMGB1P24-201ENST00000611897 E9PMD0 336 aa14.65□□□□□ -0.06
HMGB1P24-201ENST00000611897 TMEM189-UBE2V1I3L0A0 370 aa14.65□□□□□ -0.06
HMGB1P24-201ENST00000611897 PODXLO00592 558 aa14.65□□□□□ -0.06
HMGB1P24-201ENST00000611897 HIP1RO75146 1068 aa14.65□□□□□ -0.06
HMGB1P24-201ENST00000611897 RHOP08100 348 aa14.65□□□□□ -0.06
HMGB1P24-201ENST00000611897 CEBPBP17676 345 aa14.65□□□□□ -0.06
HMGB1P24-201ENST00000611897 RBM25P49756 843 aaKnown RBP14.65□□□□□ -0.06
HMGB1P24-201ENST00000611897 ROR1Q01973 937 aa14.65□□□□□ -0.06
HMGB1P24-201ENST00000611897 RAD51AP2Q09MP3 1159 aa14.65□□□□□ -0.06
HMGB1P24-201ENST00000611897 ORC2Q13416 577 aaPredicted RBP14.65□□□□□ -0.06
HMGB1P24-201ENST00000611897 UPP1Q16831 310 aa14.65□□□□□ -0.06
HMGB1P24-201ENST00000611897 UROC1Q96N76 676 aa14.65□□□□□ -0.06
HMGB1P24-201ENST00000611897 CORO1BQ9BR76 489 aa14.65□□□□□ -0.06
HMGB1P24-201ENST00000611897 TARS2Q9BW92 718 aaKnown RBP14.65□□□□□ -0.06
HMGB1P24-201ENST00000611897 MRPL4Q9BYD3 311 aaKnown RBP14.65□□□□□ -0.06
HMGB1P24-201ENST00000611897 DLGAP2Q9P1A6 1054 aa14.65□□□□□ -0.06
HMGB1P24-201ENST00000611897 ANKFY1Q9P2R3 1169 aa14.65□□□□□ -0.06
HMGB1P24-201ENST00000611897 TNFSF13BQ9Y275 285 aa14.65□□□□□ -0.06
HMGB1P24-201ENST00000611897 MTF2Q9Y483 593 aaPredicted RBP14.65□□□□□ -0.06
HMGB1P24-201ENST00000611897 SMIM28A0A1B0GU29 152 aa14.64□□□□□ -0.07
HMGB1P24-201ENST00000611897 KANSL1LA0AUZ9 987 aa14.64□□□□□ -0.07
HMGB1P24-201ENST00000611897 FAM170BA6NMN3 283 aa14.64□□□□□ -0.07
HMGB1P24-201ENST00000611897 LAMTOR5O43504 91 aa14.64□□□□□ -0.07
HMGB1P24-201ENST00000611897 SEC24BO95487 1268 aa14.64□□□□□ -0.07
HMGB1P24-201ENST00000611897 GRM5P41594 1212 aa14.64□□□□□ -0.07
HMGB1P24-201ENST00000611897 NPTX2P47972 431 aa14.64□□□□□ -0.07
HMGB1P24-201ENST00000611897 FXR2P51116 673 aaKnown RBP eCLIP14.64□□□□□ -0.07
HMGB1P24-201ENST00000611897 STARD6P59095 220 aa14.64□□□□□ -0.07
HMGB1P24-201ENST00000611897 FOXK2Q01167 660 aa14.64□□□□□ -0.07
HMGB1P24-201ENST00000611897 PFKPQ01813 784 aa14.64□□□□□ -0.07
HMGB1P24-201ENST00000611897 SLC5A9Q2M3M2 681 aa14.64□□□□□ -0.07
HMGB1P24-201ENST00000611897 SLC44A4Q53GD3 710 aa14.64□□□□□ -0.07
HMGB1P24-201ENST00000611897 VARS2Q5ST30 1063 aaKnown RBP14.64□□□□□ -0.07
HMGB1P24-201ENST00000611897 DCLK2Q8N568 766 aa14.64□□□□□ -0.07
HMGB1P24-201ENST00000611897 FBXO18Q8NFZ0 1043 aa14.64□□□□□ -0.07
HMGB1P24-201ENST00000611897 RUSC1Q9BVN2 902 aa14.64□□□□□ -0.07
HMGB1P24-201ENST00000611897 RAB34Q9BZG1 259 aa14.64□□□□□ -0.07
HMGB1P24-201ENST00000611897 SEMA4AQ9H3S1 761 aa14.64□□□□□ -0.07
HMGB1P24-201ENST00000611897 CYP4F11Q9HBI6 524 aa14.64□□□□□ -0.07
HMGB1P24-201ENST00000611897 KMT5AQ9NQR1 393 aa14.64□□□□□ -0.07
HMGB1P24-201ENST00000611897 F5P12259 2224 aa14.64□□□□□ -0.07
HMGB1P24-201ENST00000611897 WDR27A2RRH5 827 aa14.63□□□□□ -0.07
HMGB1P24-201ENST00000611897 SLC16A4O15374 487 aa14.63□□□□□ -0.07
HMGB1P24-201ENST00000611897 KINO60870 393 aaKnown RBP14.63□□□□□ -0.07
HMGB1P24-201ENST00000611897 MUTP22033 750 aa14.63□□□□□ -0.07
HMGB1P24-201ENST00000611897 CDC25AP30304 524 aa14.63□□□□□ -0.07
HMGB1P24-201ENST00000611897 MCM4P33991 863 aa14.63□□□□□ -0.07
HMGB1P24-201ENST00000611897 MATR3P43243 847 aaKnown RBP eCLIP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms