RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 PSMD5Q16401 504 aa23.82■■□□□ 1.4
CBWD3-207ENST00000611426 SYAP1Q96A49 352 aaPredicted RBP23.82■■□□□ 1.4
CBWD3-207ENST00000611426 CLSTN3Q9BQT9 956 aa23.82■■□□□ 1.4
CBWD3-207ENST00000611426 MRPL4Q9BYD3 311 aaKnown RBP23.82■■□□□ 1.4
CBWD3-207ENST00000611426 PRKD2Q9BZL6 878 aa23.82■■□□□ 1.4
CBWD3-207ENST00000611426 C17orf75Q9HAS0 396 aa23.82■■□□□ 1.4
CBWD3-207ENST00000611426 IGSF9Q9P2J2 1179 aa23.82■■□□□ 1.4
CBWD3-207ENST00000611426 N4BP1O75113 896 aaKnown RBP23.81■■□□□ 1.4
CBWD3-207ENST00000611426 B3GAT3O94766 335 aa23.81■■□□□ 1.4
CBWD3-207ENST00000611426 PAPLNO95428 1278 aa23.81■■□□□ 1.4
CBWD3-207ENST00000611426 YARSP54577 528 aaKnown RBP23.81■■□□□ 1.4
CBWD3-207ENST00000611426 GSE1Q14687 1217 aa23.81■■□□□ 1.4
CBWD3-207ENST00000611426 PTPAQ15257 358 aa23.81■■□□□ 1.4
CBWD3-207ENST00000611426 PDXDC1Q6P996 788 aa23.81■■□□□ 1.4
CBWD3-207ENST00000611426 PPP1R10Q96QC0 940 aaKnown RBP23.81■■□□□ 1.4
CBWD3-207ENST00000611426 CCDC94Q9BW85 323 aaPredicted RBP23.81■■□□□ 1.4
CBWD3-207ENST00000611426 MFSD1Q9H3U5 465 aa23.81■■□□□ 1.4
CBWD3-207ENST00000611426 ARHGAP28Q9P2N2 729 aa23.81■■□□□ 1.4
CBWD3-207ENST00000611426 TRIP11Q15643 1979 aa23.81■■□□□ 1.4
CBWD3-207ENST00000611426 A0A1W2PQ27 194 aa23.8■■□□□ 1.4
CBWD3-207ENST00000611426 A0A1W2PQ64 194 aa23.8■■□□□ 1.4
CBWD3-207ENST00000611426 A0A1W2PQD8 194 aa23.8■■□□□ 1.4
CBWD3-207ENST00000611426 VWA3AA6NCI4 1184 aa23.8■■□□□ 1.4
CBWD3-207ENST00000611426 SFI1A8K8P3 1242 aa23.8■■□□□ 1.4
CBWD3-207ENST00000611426 PPP6R2O75170 966 aa23.8■■□□□ 1.4
CBWD3-207ENST00000611426 ZMYND10O75800 440 aa23.8■■□□□ 1.4
CBWD3-207ENST00000611426 GRM5P41594 1212 aa23.8■■□□□ 1.4
CBWD3-207ENST00000611426 CLCNKBP51801 687 aa23.8■■□□□ 1.4
CBWD3-207ENST00000611426 OSTNP61366 133 aa23.8■■□□□ 1.4
CBWD3-207ENST00000611426 MAPK7Q13164 816 aa23.8■■□□□ 1.4
CBWD3-207ENST00000611426 ZNF568Q3ZCX4 644 aa23.8■■□□□ 1.4
CBWD3-207ENST00000611426 DCLRE1AQ6PJP8 1040 aa23.8■■□□□ 1.4
CBWD3-207ENST00000611426 UROC1Q96N76 676 aa23.8■■□□□ 1.4
CBWD3-207ENST00000611426 TCHPQ9BT92 498 aa23.8■■□□□ 1.4
CBWD3-207ENST00000611426 TIPINQ9BVW5 301 aa23.8■■□□□ 1.4
CBWD3-207ENST00000611426 TARS2Q9BW92 718 aaKnown RBP23.8■■□□□ 1.4
CBWD3-207ENST00000611426 CDT1Q9H211 546 aa23.8■■□□□ 1.4
CBWD3-207ENST00000611426 PTPRHQ9HD43 1115 aa23.8■■□□□ 1.4
CBWD3-207ENST00000611426 TOPORSQ9NS56 1045 aaPredicted RBP23.8■■□□□ 1.4
CBWD3-207ENST00000611426 CLIC4Q9Y696 253 aa23.8■■□□□ 1.4
CBWD3-207ENST00000611426 SMIM28A0A1B0GU29 152 aa23.79■■□□□ 1.4
CBWD3-207ENST00000611426 GUCY2CP25092 1073 aa23.79■■□□□ 1.4
CBWD3-207ENST00000611426 NUBP1P53384 320 aa23.79■■□□□ 1.4
CBWD3-207ENST00000611426 HYIQ5T013 277 aa23.79■■□□□ 1.4
CBWD3-207ENST00000611426 LIN9Q5TKA1 542 aa23.79■■□□□ 1.4
CBWD3-207ENST00000611426 CAVIN1Q6NZI2 390 aaKnown RBP23.79■■□□□ 1.4
CBWD3-207ENST00000611426 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.79■■□□□ 1.4
CBWD3-207ENST00000611426 TAS1R3Q7RTX0 852 aa23.79■■□□□ 1.4
CBWD3-207ENST00000611426 KCTD17Q8N5Z5 321 aa23.79■■□□□ 1.4
CBWD3-207ENST00000611426 CEP120Q8N960 986 aa23.79■■□□□ 1.4
CBWD3-207ENST00000611426 PNMA5Q96PV4 448 aa23.79■■□□□ 1.4
CBWD3-207ENST00000611426 MYADMQ96S97 322 aa23.79■■□□□ 1.4
CBWD3-207ENST00000611426 PLIN2Q99541 437 aa23.79■■□□□ 1.4
CBWD3-207ENST00000611426 TMEM63CQ9P1W3 806 aa23.79■■□□□ 1.4
CBWD3-207ENST00000611426 EPS15L1Q9UBC2 864 aa23.79■■□□□ 1.4
CBWD3-207ENST00000611426 KCNG1Q9UIX4 513 aa23.79■■□□□ 1.4
CBWD3-207ENST00000611426 TMEM189-UBE2V1I3L0A0 370 aa23.78■■□□□ 1.4
CBWD3-207ENST00000611426 SPTLC2O15270 562 aa23.78■■□□□ 1.4
CBWD3-207ENST00000611426 SLC16A4O15374 487 aa23.78■■□□□ 1.4
CBWD3-207ENST00000611426 ZNF445P59923 1031 aa23.78■■□□□ 1.4
CBWD3-207ENST00000611426 RAD51AP2Q09MP3 1159 aa23.78■■□□□ 1.4
CBWD3-207ENST00000611426 STK38Q15208 465 aa23.78■■□□□ 1.4
CBWD3-207ENST00000611426 UPP1Q16831 310 aa23.78■■□□□ 1.4
CBWD3-207ENST00000611426 SYT2Q8N9I0 419 aaPredicted RBP23.78■■□□□ 1.4
CBWD3-207ENST00000611426 CDK5RAP3Q96JB5 506 aa23.78■■□□□ 1.4
CBWD3-207ENST00000611426 PHOX2BQ99453 314 aa23.78■■□□□ 1.4
CBWD3-207ENST00000611426 NTPCRQ9BSD7 190 aaKnown RBP23.78■■□□□ 1.4
CBWD3-207ENST00000611426 IRF2BPLQ9H1B7 796 aa23.78■■□□□ 1.4
CBWD3-207ENST00000611426 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.78■■□□□ 1.4
CBWD3-207ENST00000611426 FBXW11Q9UKB1 542 aa23.78■■□□□ 1.4
CBWD3-207ENST00000611426 DUSP12Q9UNI6 340 aa23.78■■□□□ 1.4
CBWD3-207ENST00000611426 GOLGA6L4A6NEF3 574 aa23.78■■□□□ 1.4
CBWD3-207ENST00000611426 TRAPPC3O43617 180 aa23.78■■□□□ 1.4
CBWD3-207ENST00000611426 BMP15O95972 392 aa23.78■■□□□ 1.4
CBWD3-207ENST00000611426 MCF2P10911 925 aa23.78■■□□□ 1.4
CBWD3-207ENST00000611426 FGFR3P22607 806 aa23.78■■□□□ 1.4
CBWD3-207ENST00000611426 IGFBP6P24592 240 aaPredicted RBP23.78■■□□□ 1.4
CBWD3-207ENST00000611426 STRN3Q13033 797 aa23.78■■□□□ 1.4
CBWD3-207ENST00000611426 SF3A1Q15459 793 aaKnown RBP23.78■■□□□ 1.4
CBWD3-207ENST00000611426 ARL6IP4Q66PJ3 421 aaKnown RBP23.78■■□□□ 1.4
CBWD3-207ENST00000611426 ADALQ6DHV7 355 aa23.78■■□□□ 1.4
CBWD3-207ENST00000611426 ASTLQ6HA08 431 aaPredicted RBP23.78■■□□□ 1.4
CBWD3-207ENST00000611426 ALKAL1Q6UXT8 129 aa23.78■■□□□ 1.4
CBWD3-207ENST00000611426 TMEM105Q8N8V8 129 aa23.78■■□□□ 1.4
CBWD3-207ENST00000611426 RSAD2Q8WXG1 361 aa23.78■■□□□ 1.4
CBWD3-207ENST00000611426 ACAP3Q96P50 834 aa23.78■■□□□ 1.4
CBWD3-207ENST00000611426 GOLGA2P5Q9HBQ8 144 aa23.78■■□□□ 1.4
CBWD3-207ENST00000611426 FBXL21Q9UKT6 434 aa23.78■■□□□ 1.4
CBWD3-207ENST00000611426 VWA8A3KMH1 1905 aa23.77■■□□□ 1.4
CBWD3-207ENST00000611426 ADAM12O43184 909 aa23.77■■□□□ 1.4
CBWD3-207ENST00000611426 PLS3P13797 630 aa23.77■■□□□ 1.4
CBWD3-207ENST00000611426 OR1D2P34982 312 aa23.77■■□□□ 1.4
CBWD3-207ENST00000611426 SMTNP53814 917 aa23.77■■□□□ 1.4
CBWD3-207ENST00000611426 XKR4Q5GH76 650 aa23.77■■□□□ 1.4
CBWD3-207ENST00000611426 PPM1LQ5SGD2 360 aa23.77■■□□□ 1.4
CBWD3-207ENST00000611426 MPZL3Q6UWV2 235 aa23.77■■□□□ 1.4
CBWD3-207ENST00000611426 GET4Q7L5D6 327 aaPredicted RBP23.77■■□□□ 1.4
CBWD3-207ENST00000611426 FLCNQ8NFG4 579 aa23.77■■□□□ 1.4
CBWD3-207ENST00000611426 SPIRE2Q8WWL2 714 aa23.77■■□□□ 1.4
CBWD3-207ENST00000611426 SLC38A7Q9NVC3 462 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms