RNA–Protein interactions for RNA: ENST00000611205.4

CDKN3-211, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-211ENST00000611205 UROC1Q96N76 676 aa26.79■■□□□ 1.88
CDKN3-211ENST00000611205 TNFSF13BQ9Y275 285 aa26.79■■□□□ 1.88
CDKN3-211ENST00000611205 FANCMQ8IYD8 2048 aa26.78■■□□□ 1.88
CDKN3-211ENST00000611205 TRAPPC3O43617 180 aa26.78■■□□□ 1.88
CDKN3-211ENST00000611205 TRAPPC10P48553 1259 aa26.78■■□□□ 1.88
CDKN3-211ENST00000611205 YARSP54577 528 aaKnown RBP26.78■■□□□ 1.88
CDKN3-211ENST00000611205 PEX3P56589 373 aa26.78■■□□□ 1.88
CDKN3-211ENST00000611205 OSTNP61366 133 aa26.78■■□□□ 1.88
CDKN3-211ENST00000611205 SNW1Q13573 536 aaKnown RBP26.78■■□□□ 1.88
CDKN3-211ENST00000611205 UPP1Q16831 310 aa26.78■■□□□ 1.88
CDKN3-211ENST00000611205 PABPC1LQ4VXU2 614 aaKnown RBP26.78■■□□□ 1.88
CDKN3-211ENST00000611205 RSPO2Q6UXX9 243 aaPredicted RBP26.78■■□□□ 1.88
CDKN3-211ENST00000611205 C4orf32Q8N8J7 132 aa26.78■■□□□ 1.88
CDKN3-211ENST00000611205 PJA1Q8NG27 643 aa26.78■■□□□ 1.88
CDKN3-211ENST00000611205 DDX27Q96GQ7 796 aaKnown RBP26.78■■□□□ 1.88
CDKN3-211ENST00000611205 SHDQ96IW2 340 aa26.78■■□□□ 1.88
CDKN3-211ENST00000611205 CCDC94Q9BW85 323 aaPredicted RBP26.78■■□□□ 1.88
CDKN3-211ENST00000611205 DLGAP2Q9P1A6 1054 aa26.78■■□□□ 1.88
CDKN3-211ENST00000611205 DNMT3BQ9UBC3 853 aaKnown RBP26.78■■□□□ 1.88
CDKN3-211ENST00000611205 PHLPP2Q6ZVD8 1323 aa26.77■■□□□ 1.88
CDKN3-211ENST00000611205 HMGN5P82970 282 aaKnown RBP26.77■■□□□ 1.88
CDKN3-211ENST00000611205 ZNF568Q3ZCX4 644 aa26.77■■□□□ 1.88
CDKN3-211ENST00000611205 CD300LGQ6UXG3 332 aa26.77■■□□□ 1.88
CDKN3-211ENST00000611205 ANKS3Q6ZW76 656 aa26.77■■□□□ 1.88
CDKN3-211ENST00000611205 C3orf58Q8NDZ4 430 aa26.77■■□□□ 1.88
CDKN3-211ENST00000611205 ING5Q8WYH8 240 aa26.77■■□□□ 1.88
CDKN3-211ENST00000611205 KXD1Q9BQD3 176 aa26.77■■□□□ 1.88
CDKN3-211ENST00000611205 TOPORSQ9NS56 1045 aaPredicted RBP26.77■■□□□ 1.88
CDKN3-211ENST00000611205 DAXXQ9UER7 740 aaPredicted RBP26.77■■□□□ 1.88
CDKN3-211ENST00000611205 CACNA1IQ9P0X4 2223 aa26.77■■□□□ 1.88
CDKN3-211ENST00000611205 VPS13AQ96RL7 3174 aa26.76■■□□□ 1.87
CDKN3-211ENST00000611205 SMIM28A0A1B0GU29 152 aa26.76■■□□□ 1.87
CDKN3-211ENST00000611205 E9PMD0 336 aa26.76■■□□□ 1.87
CDKN3-211ENST00000611205 LRRN2O75325 713 aa26.76■■□□□ 1.87
CDKN3-211ENST00000611205 LMNAP02545 664 aaKnown RBP26.76■■□□□ 1.87
CDKN3-211ENST00000611205 GRM5P41594 1212 aa26.76■■□□□ 1.87
CDKN3-211ENST00000611205 STARD6P59095 220 aa26.76■■□□□ 1.87
CDKN3-211ENST00000611205 SOX4Q06945 474 aaPredicted RBP26.76■■□□□ 1.87
CDKN3-211ENST00000611205 C1orf210Q8IVY1 113 aa26.76■■□□□ 1.87
CDKN3-211ENST00000611205 ACO2Q99798 780 aaKnown RBP26.76■■□□□ 1.87
CDKN3-211ENST00000611205 RAB34Q9BZG1 259 aa26.76■■□□□ 1.87
CDKN3-211ENST00000611205 CDT1Q9H211 546 aa26.76■■□□□ 1.87
CDKN3-211ENST00000611205 BACE2Q9Y5Z0 518 aa26.76■■□□□ 1.87
CDKN3-211ENST00000611205 PDCD11Q14690 1871 aaKnown RBP26.76■■□□□ 1.87
CDKN3-211ENST00000611205 POU2F2P09086 479 aa26.75■■□□□ 1.87
CDKN3-211ENST00000611205 GLULP15104 373 aa26.75■■□□□ 1.87
CDKN3-211ENST00000611205 NPTX2P47972 431 aa26.75■■□□□ 1.87
CDKN3-211ENST00000611205 PTGDRQ13258 359 aa26.75■■□□□ 1.87
CDKN3-211ENST00000611205 DMP1Q13316 513 aaPredicted RBP26.75■■□□□ 1.87
CDKN3-211ENST00000611205 PDIA5Q14554 519 aa26.75■■□□□ 1.87
CDKN3-211ENST00000611205 MLF2Q15773 248 aaPredicted RBP26.75■■□□□ 1.87
CDKN3-211ENST00000611205 NPAS3Q8IXF0 933 aa26.75■■□□□ 1.87
CDKN3-211ENST00000611205 MRPL4Q9BYD3 311 aaKnown RBP26.75■■□□□ 1.87
CDKN3-211ENST00000611205 SEMA4AQ9H3S1 761 aa26.75■■□□□ 1.87
CDKN3-211ENST00000611205 MRPS23Q9Y3D9 190 aaKnown RBP26.75■■□□□ 1.87
CDKN3-211ENST00000611205 STK24Q9Y6E0 443 aa26.75■■□□□ 1.87
CDKN3-211ENST00000611205 PATJQ8NI35 1801 aa26.74■■□□□ 1.87
CDKN3-211ENST00000611205 HIP1RO75146 1068 aa26.74■■□□□ 1.87
CDKN3-211ENST00000611205 ID4P47928 161 aa26.74■■□□□ 1.87
CDKN3-211ENST00000611205 ZC3H14Q6PJT7 736 aaKnown RBP26.74■■□□□ 1.87
CDKN3-211ENST00000611205 IGSF22Q8N9C0 903 aa26.74■■□□□ 1.87
CDKN3-211ENST00000611205 ZSCAN31Q96LW9 406 aaPredicted RBP26.74■■□□□ 1.87
CDKN3-211ENST00000611205 TARS2Q9BW92 718 aaKnown RBP26.74■■□□□ 1.87
CDKN3-211ENST00000611205 KMT5AQ9NQR1 393 aa26.74■■□□□ 1.87
CDKN3-211ENST00000611205 KCNH3Q9ULD8 1083 aa26.74■■□□□ 1.87
CDKN3-211ENST00000611205 DNM3Q9UQ16 869 aa26.74■■□□□ 1.87
CDKN3-211ENST00000611205 PCDHB6Q9Y5E3 794 aa26.74■■□□□ 1.87
CDKN3-211ENST00000611205 KANSL1LA0AUZ9 987 aa26.73■■□□□ 1.87
CDKN3-211ENST00000611205 PP2D1A8MPX8 630 aa26.73■■□□□ 1.87
CDKN3-211ENST00000611205 PODXLO00592 558 aa26.73■■□□□ 1.87
CDKN3-211ENST00000611205 SP9P0CG40 484 aa26.73■■□□□ 1.87
CDKN3-211ENST00000611205 FOXK2Q01167 660 aa26.73■■□□□ 1.87
CDKN3-211ENST00000611205 ROR1Q01973 937 aa26.73■■□□□ 1.87
CDKN3-211ENST00000611205 UBXN2BQ14CS0 331 aa26.73■■□□□ 1.87
CDKN3-211ENST00000611205 SLC44A4Q53GD3 710 aa26.73■■□□□ 1.87
CDKN3-211ENST00000611205 KRT79Q5XKE5 535 aa26.73■■□□□ 1.87
CDKN3-211ENST00000611205 MCRS1Q96EZ8 462 aa26.73■■□□□ 1.87
CDKN3-211ENST00000611205 TCHPQ9BT92 498 aa26.73■■□□□ 1.87
CDKN3-211ENST00000611205 TMEM134Q9H6X4 195 aa26.73■■□□□ 1.87
CDKN3-211ENST00000611205 SLC38A7Q9NVC3 462 aa26.73■■□□□ 1.87
CDKN3-211ENST00000611205 LRG1P02750 347 aa26.72■■□□□ 1.87
CDKN3-211ENST00000611205 RHOP08100 348 aa26.72■■□□□ 1.87
CDKN3-211ENST00000611205 HARSP12081 509 aaKnown RBP26.72■■□□□ 1.87
CDKN3-211ENST00000611205 ELF1P32519 619 aa26.72■■□□□ 1.87
CDKN3-211ENST00000611205 ARPP19P56211 112 aa26.72■■□□□ 1.87
CDKN3-211ENST00000611205 PFKPQ01813 784 aa26.72■■□□□ 1.87
CDKN3-211ENST00000611205 PRKCQQ04759 706 aa26.72■■□□□ 1.87
CDKN3-211ENST00000611205 VARS2Q5ST30 1063 aaKnown RBP26.72■■□□□ 1.87
CDKN3-211ENST00000611205 ALKAL1Q6UXT8 129 aa26.72■■□□□ 1.87
CDKN3-211ENST00000611205 RTL10Q7L3V2 364 aa26.72■■□□□ 1.87
CDKN3-211ENST00000611205 TAS1R3Q7RTX0 852 aa26.72■■□□□ 1.87
CDKN3-211ENST00000611205 DAW1Q8N136 415 aa26.72■■□□□ 1.87
CDKN3-211ENST00000611205 DRC1Q96MC2 740 aa26.72■■□□□ 1.87
CDKN3-211ENST00000611205 ZMAT2Q96NC0 199 aaKnown RBP26.72■■□□□ 1.87
CDKN3-211ENST00000611205 RUSC1Q9BVN2 902 aa26.72■■□□□ 1.87
CDKN3-211ENST00000611205 PTPRHQ9HD43 1115 aa26.72■■□□□ 1.87
CDKN3-211ENST00000611205 GVINP1Q7Z2Y8 2422 aa26.71■■□□□ 1.87
CDKN3-211ENST00000611205 CDC25AP30304 524 aa26.71■■□□□ 1.87
CDKN3-211ENST00000611205 TOB1P50616 345 aaPredicted RBP26.71■■□□□ 1.87
CDKN3-211ENST00000611205 SLC5A9Q2M3M2 681 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms