RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 RSPH3Q86UC2 560 aa5.5□□□□□ -1.53
SMCHD1-213ENST00000609587 TRMT2AQ8IZ69 625 aaKnown RBP5.5□□□□□ -1.53
SMCHD1-213ENST00000609587 CAMKK1Q8N5S9 505 aa5.5□□□□□ -1.53
SMCHD1-213ENST00000609587 REPS2Q8NFH8 660 aa5.5□□□□□ -1.53
SMCHD1-213ENST00000609587 CCHCR1Q8TD31 782 aa5.5□□□□□ -1.53
SMCHD1-213ENST00000609587 RAB24Q969Q5 203 aa5.5□□□□□ -1.53
SMCHD1-213ENST00000609587 CYFIP2Q96F07 1278 aa5.5□□□□□ -1.53
SMCHD1-213ENST00000609587 ACO2Q99798 780 aaKnown RBP5.5□□□□□ -1.53
SMCHD1-213ENST00000609587 PDCD2LQ9BRP1 358 aa5.5□□□□□ -1.53
SMCHD1-213ENST00000609587 SENP6Q9GZR1 1112 aaPredicted RBP5.5□□□□□ -1.53
SMCHD1-213ENST00000609587 LDAHQ9H6V9 325 aa5.5□□□□□ -1.53
SMCHD1-213ENST00000609587 IL23AQ9NPF7 189 aa5.5□□□□□ -1.53
SMCHD1-213ENST00000609587 GABBR1Q9UBS5 961 aa5.5□□□□□ -1.53
SMCHD1-213ENST00000609587 PCDHB1Q9Y5F3 818 aa5.5□□□□□ -1.53
SMCHD1-213ENST00000609587 UBE2QL1A1L167 161 aa5.49□□□□□ -1.53
SMCHD1-213ENST00000609587 CAND2O75155 1236 aa5.49□□□□□ -1.53
SMCHD1-213ENST00000609587 MYBP10242 640 aa5.49□□□□□ -1.53
SMCHD1-213ENST00000609587 KRT4P19013 534 aa5.49□□□□□ -1.53
SMCHD1-213ENST00000609587 GNALP38405 381 aa5.49□□□□□ -1.53
SMCHD1-213ENST00000609587 HHEXQ03014 270 aa5.49□□□□□ -1.53
SMCHD1-213ENST00000609587 HLTFQ14527 1009 aaKnown RBP eCLIP5.49□□□□□ -1.53
SMCHD1-213ENST00000609587 GBX1Q14549 363 aa5.49□□□□□ -1.53
SMCHD1-213ENST00000609587 GRM3Q14832 879 aa5.49□□□□□ -1.53
SMCHD1-213ENST00000609587 PRAMEF14Q5SWL7 426 aa5.49□□□□□ -1.53
SMCHD1-213ENST00000609587 THEMIS2Q5TEJ8 643 aa5.49□□□□□ -1.53
SMCHD1-213ENST00000609587 SLC4A10Q6U841 1118 aa5.49□□□□□ -1.53
SMCHD1-213ENST00000609587 Q6ZPA2 131 aa5.49□□□□□ -1.53
SMCHD1-213ENST00000609587 DGKHQ86XP1 1220 aa5.49□□□□□ -1.53
SMCHD1-213ENST00000609587 DENND1CQ8IV53 801 aa5.49□□□□□ -1.53
SMCHD1-213ENST00000609587 ZNF808Q8N4W9 903 aaPredicted RBP5.49□□□□□ -1.53
SMCHD1-213ENST00000609587 ZBTB34Q8NCN2 500 aa5.49□□□□□ -1.53
SMCHD1-213ENST00000609587 FBXO18Q8NFZ0 1043 aa5.49□□□□□ -1.53
SMCHD1-213ENST00000609587 MDM1Q8TC05 714 aa5.49□□□□□ -1.53
SMCHD1-213ENST00000609587 NSUN6Q8TEA1 469 aaKnown RBP5.49□□□□□ -1.53
SMCHD1-213ENST00000609587 TMEM176AQ96HP8 235 aa5.49□□□□□ -1.53
SMCHD1-213ENST00000609587 CLPTM1LQ96KA5 538 aa5.49□□□□□ -1.53
SMCHD1-213ENST00000609587 FAM193BQ96PV7 902 aaPredicted RBP5.49□□□□□ -1.53
SMCHD1-213ENST00000609587 PCGF6Q9BYE7 350 aa5.49□□□□□ -1.53
SMCHD1-213ENST00000609587 KMT5AQ9NQR1 393 aa5.49□□□□□ -1.53
SMCHD1-213ENST00000609587 TMEM140Q9NV12 185 aa5.49□□□□□ -1.53
SMCHD1-213ENST00000609587 DDX20Q9UHI6 824 aaKnown RBP5.49□□□□□ -1.53
SMCHD1-213ENST00000609587 FRMPD2Q68DX3 1309 aaPredicted RBP5.48□□□□□ -1.53
SMCHD1-213ENST00000609587 MYBBP1AQ9BQG0 1328 aaKnown RBP5.48□□□□□ -1.53
SMCHD1-213ENST00000609587 H3BML4 177 aa5.48□□□□□ -1.53
SMCHD1-213ENST00000609587 FTLP02792 175 aaPredicted RBP5.48□□□□□ -1.53
SMCHD1-213ENST00000609587 GZMKP49863 264 aa5.48□□□□□ -1.53
SMCHD1-213ENST00000609587 ATXN1P54253 815 aaKnown RBP5.48□□□□□ -1.53
SMCHD1-213ENST00000609587 APBA1Q02410 837 aa5.48□□□□□ -1.53
SMCHD1-213ENST00000609587 TARDBPQ13148 414 aaKnown RBP eCLIP5.48□□□□□ -1.53
SMCHD1-213ENST00000609587 CCDC157Q569K6 752 aa5.48□□□□□ -1.53
SMCHD1-213ENST00000609587 FAM111BQ6SJ93 734 aa5.48□□□□□ -1.53
SMCHD1-213ENST00000609587 D2HGDHQ8N465 521 aa5.48□□□□□ -1.53
SMCHD1-213ENST00000609587 PPP1R35Q8TAP8 253 aa5.48□□□□□ -1.53
SMCHD1-213ENST00000609587 STON2Q8WXE9 905 aa5.48□□□□□ -1.53
SMCHD1-213ENST00000609587 RGMAQ96B86 450 aa5.48□□□□□ -1.53
SMCHD1-213ENST00000609587 ARL8AQ96BM9 186 aa5.48□□□□□ -1.53
SMCHD1-213ENST00000609587 IL17RAQ96F46 866 aa5.48□□□□□ -1.53
SMCHD1-213ENST00000609587 TMX3Q96JJ7 454 aa5.48□□□□□ -1.53
SMCHD1-213ENST00000609587 TCF25Q9BQ70 676 aa5.48□□□□□ -1.53
SMCHD1-213ENST00000609587 ENKD1Q9H0I2 346 aa5.48□□□□□ -1.53
SMCHD1-213ENST00000609587 AJAP1Q9UKB5 411 aaPredicted RBP5.48□□□□□ -1.53
SMCHD1-213ENST00000609587 SH3BP1Q9Y3L3 701 aa5.48□□□□□ -1.53
SMCHD1-213ENST00000609587 SLC16A6O15403 523 aa5.47□□□□□ -1.53
SMCHD1-213ENST00000609587 GPR32O75388 356 aa5.47□□□□□ -1.53
SMCHD1-213ENST00000609587 UBXN7O94888 489 aa5.47□□□□□ -1.53
SMCHD1-213ENST00000609587 AMY1AP04745 511 aa5.47□□□□□ -1.53
SMCHD1-213ENST00000609587 ALDH2P05091 517 aa5.47□□□□□ -1.53
SMCHD1-213ENST00000609587 KRT18P05783 430 aaKnown RBP5.47□□□□□ -1.53
SMCHD1-213ENST00000609587 IL2RBP14784 551 aa5.47□□□□□ -1.53
SMCHD1-213ENST00000609587 DDCP20711 480 aa5.47□□□□□ -1.53
SMCHD1-213ENST00000609587 HIBADHP31937 336 aaKnown RBP5.47□□□□□ -1.53
SMCHD1-213ENST00000609587 GUCY1A2P33402 732 aa5.47□□□□□ -1.53
SMCHD1-213ENST00000609587 MAP2K6P52564 334 aa5.47□□□□□ -1.53
SMCHD1-213ENST00000609587 MRPL49Q13405 166 aaKnown RBP5.47□□□□□ -1.53
SMCHD1-213ENST00000609587 RAB39AQ14964 217 aa5.47□□□□□ -1.53
SMCHD1-213ENST00000609587 SPTY2D1Q68D10 685 aaPredicted RBP5.47□□□□□ -1.53
SMCHD1-213ENST00000609587 GADL1Q6ZQY3 521 aa5.47□□□□□ -1.53
SMCHD1-213ENST00000609587 ZNF572Q7Z3I7 529 aaPredicted RBP5.47□□□□□ -1.53
SMCHD1-213ENST00000609587 SGMS1Q86VZ5 419 aa5.47□□□□□ -1.53
SMCHD1-213ENST00000609587 ANKRD35Q8N283 1001 aa5.47□□□□□ -1.53
SMCHD1-213ENST00000609587 ZGPATQ8N5A5 531 aaKnown RBP5.47□□□□□ -1.53
SMCHD1-213ENST00000609587 C3orf20Q8ND61 904 aa5.47□□□□□ -1.53
SMCHD1-213ENST00000609587 TIFAQ96CG3 184 aa5.47□□□□□ -1.53
SMCHD1-213ENST00000609587 CGRRF1Q99675 332 aa5.47□□□□□ -1.53
SMCHD1-213ENST00000609587 EPC1Q9H2F5 836 aa5.47□□□□□ -1.53
SMCHD1-213ENST00000609587 MOCS1Q9NZB8 636 aa5.47□□□□□ -1.53
SMCHD1-213ENST00000609587 POLHQ9Y253 713 aa5.47□□□□□ -1.53
SMCHD1-213ENST00000609587 TTBK1Q5TCY1 1321 aaPredicted RBP5.47□□□□□ -1.53
SMCHD1-213ENST00000609587 ZMYM3Q14202 1370 aa5.46□□□□□ -1.54
SMCHD1-213ENST00000609587 LRRC14BA6NHZ5 514 aa5.46□□□□□ -1.54
SMCHD1-213ENST00000609587 CYP27B1O15528 508 aa5.46□□□□□ -1.54
SMCHD1-213ENST00000609587 TUSC2O75896 110 aa5.46□□□□□ -1.54
SMCHD1-213ENST00000609587 MAKP20794 623 aa5.46□□□□□ -1.54
SMCHD1-213ENST00000609587 FLT3LGP49771 235 aa5.46□□□□□ -1.54
SMCHD1-213ENST00000609587 SP140Q13342 867 aa5.46□□□□□ -1.54
SMCHD1-213ENST00000609587 FAM47AQ5JRC9 791 aa5.46□□□□□ -1.54
SMCHD1-213ENST00000609587 MFSD14BQ5SR56 506 aa5.46□□□□□ -1.54
SMCHD1-213ENST00000609587 CCSAPQ6IQ19 270 aaPredicted RBP5.46□□□□□ -1.54
SMCHD1-213ENST00000609587 MFSD5Q6N075 450 aa5.46□□□□□ -1.54
SMCHD1-213ENST00000609587 OVCH2Q7RTZ1 564 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms