RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 XKR4Q5GH76 650 aa17.55■□□□□ 0.4
SGMS1-209ENST00000609445 HYIQ5T013 277 aa17.55■□□□□ 0.4
SGMS1-209ENST00000609445 LIN9Q5TKA1 542 aa17.55■□□□□ 0.4
SGMS1-209ENST00000609445 DCLRE1AQ6PJP8 1040 aa17.55■□□□□ 0.4
SGMS1-209ENST00000609445 ALKAL1Q6UXT8 129 aa17.55■□□□□ 0.4
SGMS1-209ENST00000609445 GRASPQ7Z6J2 395 aaPredicted RBP17.55■□□□□ 0.4
SGMS1-209ENST00000609445 SIX5Q8N196 739 aa17.55■□□□□ 0.4
SGMS1-209ENST00000609445 SLC44A3Q8N4M1 653 aa17.55■□□□□ 0.4
SGMS1-209ENST00000609445 ATOH1Q92858 354 aaPredicted RBP17.55■□□□□ 0.4
SGMS1-209ENST00000609445 SNX27Q96L92 541 aa17.55■□□□□ 0.4
SGMS1-209ENST00000609445 ZMAT2Q96NC0 199 aaKnown RBP17.55■□□□□ 0.4
SGMS1-209ENST00000609445 MTRRQ9UBK8 725 aa17.55■□□□□ 0.4
SGMS1-209ENST00000609445 NPHP3-ACAD11A0A0J9YXS1 232 aa17.54■□□□□ 0.4
SGMS1-209ENST00000609445 CCL16O15467 120 aa17.54■□□□□ 0.4
SGMS1-209ENST00000609445 MEFVO15553 781 aaPredicted RBP17.54■□□□□ 0.4
SGMS1-209ENST00000609445 PI15O43692 258 aa17.54■□□□□ 0.4
SGMS1-209ENST00000609445 MCF2P10911 925 aa17.54■□□□□ 0.4
SGMS1-209ENST00000609445 LAMP2P13473 410 aa17.54■□□□□ 0.4
SGMS1-209ENST00000609445 PROZP22891 400 aa17.54■□□□□ 0.4
SGMS1-209ENST00000609445 CACNB1Q02641 598 aaPredicted RBP17.54■□□□□ 0.4
SGMS1-209ENST00000609445 RAB33AQ14088 237 aa17.54■□□□□ 0.4
SGMS1-209ENST00000609445 SEZ6Q53EL9 994 aa17.54■□□□□ 0.4
SGMS1-209ENST00000609445 PPM1LQ5SGD2 360 aa17.54■□□□□ 0.4
SGMS1-209ENST00000609445 DDX27Q96GQ7 796 aaKnown RBP17.54■□□□□ 0.4
SGMS1-209ENST00000609445 UROC1Q96N76 676 aa17.54■□□□□ 0.4
SGMS1-209ENST00000609445 TCHPQ9BT92 498 aa17.54■□□□□ 0.4
SGMS1-209ENST00000609445 TOPORSQ9NS56 1045 aaPredicted RBP17.54■□□□□ 0.4
SGMS1-209ENST00000609445 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.54■□□□□ 0.41e-7■■■□□ 14.9
SGMS1-209ENST00000609445 RBM19Q9Y4C8 960 aaKnown RBP17.54■□□□□ 0.4
SGMS1-209ENST00000609445 MYH15Q9Y2K3 1946 aa17.54■□□□□ 0.4
SGMS1-209ENST00000609445 USP34Q70CQ2 3546 aa17.53■□□□□ 0.4
SGMS1-209ENST00000609445 RIF1Q5UIP0 2472 aaKnown RBP17.53■□□□□ 0.4
SGMS1-209ENST00000609445 HNRNPA1P09651 372 aaKnown RBP eCLIP17.53■□□□□ 0.4
SGMS1-209ENST00000609445 PLA2G4BP0C869 781 aa17.53■□□□□ 0.4
SGMS1-209ENST00000609445 FSHRP23945 695 aa17.53■□□□□ 0.4
SGMS1-209ENST00000609445 CLCN5P51795 746 aa17.53■□□□□ 0.4
SGMS1-209ENST00000609445 NUBP1P53384 320 aa17.53■□□□□ 0.4
SGMS1-209ENST00000609445 SLC12A3P55017 1021 aa17.53■□□□□ 0.4
SGMS1-209ENST00000609445 TMEM119Q4V9L6 283 aa17.53■□□□□ 0.4
SGMS1-209ENST00000609445 PDXDC1Q6P996 788 aa17.53■□□□□ 0.4
SGMS1-209ENST00000609445 MPZL3Q6UWV2 235 aa17.53■□□□□ 0.4
SGMS1-209ENST00000609445 SYT2Q8N9I0 419 aaPredicted RBP17.53■□□□□ 0.4
SGMS1-209ENST00000609445 TMEM161BQ8NDZ6 487 aa17.53■□□□□ 0.4
SGMS1-209ENST00000609445 SLC7A14Q8TBB6 771 aa17.53■□□□□ 0.4
SGMS1-209ENST00000609445 C18orf25Q96B23 403 aaPredicted RBP17.53■□□□□ 0.4
SGMS1-209ENST00000609445 ACAP3Q96P50 834 aa17.53■□□□□ 0.4
SGMS1-209ENST00000609445 TIPINQ9BVW5 301 aa17.53■□□□□ 0.4
SGMS1-209ENST00000609445 C17orf75Q9HAS0 396 aa17.53■□□□□ 0.4
SGMS1-209ENST00000609445 POLIQ9UNA4 740 aa17.53■□□□□ 0.4
SGMS1-209ENST00000609445 SMC3Q9UQE7 1217 aa17.53■□□□□ 0.4
SGMS1-209ENST00000609445 CDY1Q9Y6F8 540 aa17.53■□□□□ 0.4
SGMS1-209ENST00000609445 KRBA1A5PL33 1030 aa17.52■□□□□ 0.4
SGMS1-209ENST00000609445 PODXLO00592 558 aa17.52■□□□□ 0.4
SGMS1-209ENST00000609445 PLS3P13797 630 aa17.52■□□□□ 0.4
SGMS1-209ENST00000609445 AOC1P19801 751 aa17.52■□□□□ 0.4
SGMS1-209ENST00000609445 HTR4Q13639 388 aa17.52■□□□□ 0.4
SGMS1-209ENST00000609445 ARSHQ5FYA8 562 aa17.52■□□□□ 0.4
SGMS1-209ENST00000609445 AXDND1Q5T1B0 1012 aaPredicted RBP17.52■□□□□ 0.4
SGMS1-209ENST00000609445 ARL6IP4Q66PJ3 421 aaKnown RBP17.52■□□□□ 0.4
SGMS1-209ENST00000609445 TMEM130Q8N3G9 435 aa17.52■□□□□ 0.4
SGMS1-209ENST00000609445 ITFG1Q8TB96 612 aa17.52■□□□□ 0.4
SGMS1-209ENST00000609445 LRRC15Q8TF66 581 aa17.52■□□□□ 0.4
SGMS1-209ENST00000609445 SPIRE2Q8WWL2 714 aa17.52■□□□□ 0.4
SGMS1-209ENST00000609445 CDK5RAP3Q96JB5 506 aa17.52■□□□□ 0.4
SGMS1-209ENST00000609445 NTPCRQ9BSD7 190 aaKnown RBP17.52■□□□□ 0.4
SGMS1-209ENST00000609445 HCFC1R1Q9NWW0 138 aa17.52■□□□□ 0.4
SGMS1-209ENST00000609445 ANKFY1Q9P2R3 1169 aa17.52■□□□□ 0.4
SGMS1-209ENST00000609445 CA14Q9ULX7 337 aa17.52■□□□□ 0.4
SGMS1-209ENST00000609445 ANHXE9PGG2 379 aa17.51■□□□□ 0.39
SGMS1-209ENST00000609445 TRAPPC3O43617 180 aa17.51■□□□□ 0.39
SGMS1-209ENST00000609445 MAPTP10636 758 aaKnown RBP17.51■□□□□ 0.39
SGMS1-209ENST00000609445 SRFP11831 508 aa17.51■□□□□ 0.39
SGMS1-209ENST00000609445 KCNE1P15382 129 aa17.51■□□□□ 0.39
SGMS1-209ENST00000609445 PTPRZ1P23471 2315 aaPredicted RBP17.51■□□□□ 0.39
SGMS1-209ENST00000609445 HOXA9P31269 272 aa17.51■□□□□ 0.39
SGMS1-209ENST00000609445 STRN3Q13033 797 aa17.51■□□□□ 0.39
SGMS1-209ENST00000609445 NXPE3Q969Y0 559 aa17.51■□□□□ 0.39
SGMS1-209ENST00000609445 RPP25Q9BUL9 199 aaKnown RBP17.51■□□□□ 0.39
SGMS1-209ENST00000609445 IRF2BPLQ9H1B7 796 aa17.51■□□□□ 0.39
SGMS1-209ENST00000609445 UPF2Q9HAU5 1272 aaKnown RBP17.51■□□□□ 0.39
SGMS1-209ENST00000609445 SLC38A7Q9NVC3 462 aa17.51■□□□□ 0.39
SGMS1-209ENST00000609445 CNTN3Q9P232 1028 aa17.51■□□□□ 0.39
SGMS1-209ENST00000609445 DAXXQ9UER7 740 aaPredicted RBP17.51■□□□□ 0.39
SGMS1-209ENST00000609445 BACE2Q9Y5Z0 518 aa17.51■□□□□ 0.39
SGMS1-209ENST00000609445 NUMBLQ9Y6R0 609 aa17.51■□□□□ 0.39
SGMS1-209ENST00000609445 STK25O00506 426 aa17.5■□□□□ 0.39
SGMS1-209ENST00000609445 XYLBO75191 536 aa17.5■□□□□ 0.39
SGMS1-209ENST00000609445 TOM1L1O75674 476 aa17.5■□□□□ 0.39
SGMS1-209ENST00000609445 SMTNP53814 917 aa17.5■□□□□ 0.39
SGMS1-209ENST00000609445 GRIN1Q05586 938 aa17.5■□□□□ 0.39
SGMS1-209ENST00000609445 NOLC1Q14978 699 aaKnown RBP eCLIP17.5■□□□□ 0.39
SGMS1-209ENST00000609445 SLC10A6Q3KNW5 377 aa17.5■□□□□ 0.39
SGMS1-209ENST00000609445 VARS2Q5ST30 1063 aaKnown RBP17.5■□□□□ 0.39
SGMS1-209ENST00000609445 LARP1BQ659C4 914 aaKnown RBP17.5■□□□□ 0.39
SGMS1-209ENST00000609445 PARM1Q6UWI2 310 aa17.5■□□□□ 0.39
SGMS1-209ENST00000609445 ANKS3Q6ZW76 656 aa17.5■□□□□ 0.39
SGMS1-209ENST00000609445 GPR152Q8TDT2 470 aa17.5■□□□□ 0.39
SGMS1-209ENST00000609445 FGF14Q92915 247 aa17.5■□□□□ 0.39
SGMS1-209ENST00000609445 HAPLN2Q9GZV7 340 aa17.5■□□□□ 0.39
SGMS1-209ENST00000609445 DNMT3BQ9UBC3 853 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms