RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 DYMQ7RTS9 669 aa20.98■□□□□ 0.95
CTSA-217ENST00000607482 PLCD3Q8N3E9 789 aa20.98■□□□□ 0.95
CTSA-217ENST00000607482 SNX27Q96L92 541 aa20.98■□□□□ 0.95
CTSA-217ENST00000607482 USP28Q96RU2 1077 aa20.98■□□□□ 0.95
CTSA-217ENST00000607482 PANK2Q9BZ23 570 aa20.98■□□□□ 0.95
CTSA-217ENST00000607482 TGM5O43548 720 aa20.97■□□□□ 0.95
CTSA-217ENST00000607482 BRD1O95696 1058 aa20.97■□□□□ 0.95
CTSA-217ENST00000607482 EFEMP2O95967 443 aa20.97■□□□□ 0.95
CTSA-217ENST00000607482 CLTAP09496 248 aa20.97■□□□□ 0.95
CTSA-217ENST00000607482 UPP1Q16831 310 aa20.97■□□□□ 0.95
CTSA-217ENST00000607482 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.97■□□□□ 0.95
CTSA-217ENST00000607482 C15orf39Q6ZRI6 1047 aa20.97■□□□□ 0.95
CTSA-217ENST00000607482 USP49Q70CQ1 688 aa20.97■□□□□ 0.95
CTSA-217ENST00000607482 HDAC7Q8WUI4 952 aa20.97■□□□□ 0.95
CTSA-217ENST00000607482 STAMQ92783 540 aa20.97■□□□□ 0.95
CTSA-217ENST00000607482 GOLGA2P5Q9HBQ8 144 aa20.97■□□□□ 0.95
CTSA-217ENST00000607482 C11orf16Q9NQ32 467 aa20.97■□□□□ 0.95
CTSA-217ENST00000607482 MYH11P35749 1972 aa20.96■□□□□ 0.95
CTSA-217ENST00000607482 C2CD4DB7Z1M9 353 aa20.96■□□□□ 0.95
CTSA-217ENST00000607482 PODXLO00592 558 aa20.96■□□□□ 0.95
CTSA-217ENST00000607482 KCNE1P15382 129 aa20.96■□□□□ 0.95
CTSA-217ENST00000607482 RPL9P32969 192 aaKnown RBP20.96■□□□□ 0.95
CTSA-217ENST00000607482 PPP2R3AQ06190 1150 aa20.96■□□□□ 0.95
CTSA-217ENST00000607482 MCL1Q07820 350 aa20.96■□□□□ 0.95
CTSA-217ENST00000607482 NAB2Q15742 525 aa20.96■□□□□ 0.95
CTSA-217ENST00000607482 SPRYD3Q8NCJ5 442 aa20.96■□□□□ 0.95
CTSA-217ENST00000607482 KREMEN2Q8NCW0 462 aa20.96■□□□□ 0.95
CTSA-217ENST00000607482 PIK3R5Q8WYR1 880 aa20.96■□□□□ 0.95
CTSA-217ENST00000607482 SMG7Q92540 1137 aaKnown RBP20.96■□□□□ 0.95
CTSA-217ENST00000607482 FAM212AQ96EL1 285 aa20.96■□□□□ 0.95
CTSA-217ENST00000607482 MFSD14AQ96MC6 490 aa20.96■□□□□ 0.95
CTSA-217ENST00000607482 MSTO1Q9BUK6 570 aa20.96■□□□□ 0.95
CTSA-217ENST00000607482 TFIP11Q9UBB9 837 aaKnown RBP20.96■□□□□ 0.95
CTSA-217ENST00000607482 RAPGEFL1Q9UHV5 662 aa20.96■□□□□ 0.95
CTSA-217ENST00000607482 C1RP00736 705 aa20.95■□□□□ 0.94
CTSA-217ENST00000607482 ZNF131P52739 623 aa20.95■□□□□ 0.94
CTSA-217ENST00000607482 ZXDAP98168 799 aa20.95■□□□□ 0.94
CTSA-217ENST00000607482 PTPN21Q16825 1174 aa20.95■□□□□ 0.94
CTSA-217ENST00000607482 FOXD4L6Q3SYB3 417 aaPredicted RBP20.95■□□□□ 0.94
CTSA-217ENST00000607482 ALKAL1Q6UXT8 129 aa20.95■□□□□ 0.94
CTSA-217ENST00000607482 CYP26C1Q6V0L0 522 aa20.95■□□□□ 0.94
CTSA-217ENST00000607482 FOXD4L3Q6VB84 417 aaPredicted RBP20.95■□□□□ 0.94
CTSA-217ENST00000607482 CMASQ8NFW8 434 aaPredicted RBP20.95■□□□□ 0.94
CTSA-217ENST00000607482 MRPL44Q9H9J2 332 aaKnown RBP20.95■□□□□ 0.94
CTSA-217ENST00000607482 RPF1Q9H9Y2 349 aaKnown RBP20.95■□□□□ 0.94
CTSA-217ENST00000607482 PLEKHA5Q9HAU0 1116 aa20.95■□□□□ 0.94
CTSA-217ENST00000607482 CNTN3Q9P232 1028 aa20.95■□□□□ 0.94
CTSA-217ENST00000607482 LIMD1Q9UGP4 676 aa20.95■□□□□ 0.94
CTSA-217ENST00000607482 USTQ9Y2C2 406 aa20.95■□□□□ 0.94
CTSA-217ENST00000607482 TMEM189-UBE2V1I3L0A0 370 aa20.94■□□□□ 0.94
CTSA-217ENST00000607482 I3L4J1 428 aa20.94■□□□□ 0.94
CTSA-217ENST00000607482 SPTLC2O15270 562 aa20.94■□□□□ 0.94
CTSA-217ENST00000607482 XPOTO43592 962 aaKnown RBP20.94■□□□□ 0.94
CTSA-217ENST00000607482 RFPL2O75678 378 aa20.94■□□□□ 0.94
CTSA-217ENST00000607482 CXCL8P10145 99 aa20.94■□□□□ 0.94
CTSA-217ENST00000607482 IDEP14735 1019 aa20.94■□□□□ 0.94
CTSA-217ENST00000607482 NMT1P30419 496 aaKnown RBP20.94■□□□□ 0.94
CTSA-217ENST00000607482 GBP2P32456 591 aaPredicted RBP20.94■□□□□ 0.94
CTSA-217ENST00000607482 MTMR3Q13615 1198 aa20.94■□□□□ 0.94
CTSA-217ENST00000607482 XKR4Q5GH76 650 aa20.94■□□□□ 0.94
CTSA-217ENST00000607482 TRIM67Q6ZTA4 783 aa20.94■□□□□ 0.94
CTSA-217ENST00000607482 ANKS3Q6ZW76 656 aa20.94■□□□□ 0.94
CTSA-217ENST00000607482 LNX1Q8TBB1 728 aaPredicted RBP20.94■□□□□ 0.94
CTSA-217ENST00000607482 DDX12PQ92771 950 aa20.94■□□□□ 0.94
CTSA-217ENST00000607482 PBXIP1Q96AQ6 731 aa20.94■□□□□ 0.94
CTSA-217ENST00000607482 C18orf25Q96B23 403 aaPredicted RBP20.94■□□□□ 0.94
CTSA-217ENST00000607482 KIF12Q96FN5 646 aa20.94■□□□□ 0.94
CTSA-217ENST00000607482 ZDHHC7Q9NXF8 308 aa20.94■□□□□ 0.94
CTSA-217ENST00000607482 POLIQ9UNA4 740 aa20.94■□□□□ 0.94
CTSA-217ENST00000607482 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.94■□□□□ 0.94
CTSA-217ENST00000607482 TMEM221A6NGB7 291 aa20.93■□□□□ 0.94
CTSA-217ENST00000607482 M0R296 226 aa20.93■□□□□ 0.94
CTSA-217ENST00000607482 ABLIM1O14639 778 aa20.93■□□□□ 0.94
CTSA-217ENST00000607482 GAP43P17677 238 aa20.93■□□□□ 0.94
CTSA-217ENST00000607482 MCM4P33991 863 aa20.93■□□□□ 0.94
CTSA-217ENST00000607482 OR1D2P34982 312 aa20.93■□□□□ 0.94
CTSA-217ENST00000607482 SLC10A6Q3KNW5 377 aa20.93■□□□□ 0.94
CTSA-217ENST00000607482 PPM1LQ5SGD2 360 aa20.93■□□□□ 0.94
CTSA-217ENST00000607482 SLFN12LQ6IEE8 588 aa20.93■□□□□ 0.94
CTSA-217ENST00000607482 SUGP1Q8IWZ8 645 aaKnown RBP20.93■□□□□ 0.94
CTSA-217ENST00000607482 PDILTQ8N807 584 aa20.93■□□□□ 0.94
CTSA-217ENST00000607482 LRRC15Q8TF66 581 aa20.93■□□□□ 0.94
CTSA-217ENST00000607482 ZMAT2Q96NC0 199 aaKnown RBP20.93■□□□□ 0.94
CTSA-217ENST00000607482 CLSTN3Q9BQT9 956 aa20.93■□□□□ 0.94
CTSA-217ENST00000607482 EXOC7Q9UPT5 735 aa20.93■□□□□ 0.94
CTSA-217ENST00000607482 OGTO15294 1046 aa20.92■□□□□ 0.94
CTSA-217ENST00000607482 FGFR3P22607 806 aa20.92■□□□□ 0.94
CTSA-217ENST00000607482 TKTP29401 623 aaKnown RBP20.92■□□□□ 0.94
CTSA-217ENST00000607482 BRCC3P46736 316 aa20.92■□□□□ 0.94
CTSA-217ENST00000607482 NASPP49321 788 aaPredicted RBP20.92■□□□□ 0.94
CTSA-217ENST00000607482 SOX4Q06945 474 aaPredicted RBP20.92■□□□□ 0.94
CTSA-217ENST00000607482 SPAG1Q07617 926 aa20.92■□□□□ 0.94
CTSA-217ENST00000607482 SIGLEC14Q08ET2 396 aa20.92■□□□□ 0.94
CTSA-217ENST00000607482 ADALQ6DHV7 355 aa20.92■□□□□ 0.94
CTSA-217ENST00000607482 SFR1Q86XK3 245 aa20.92■□□□□ 0.94
CTSA-217ENST00000607482 UBALD2Q8IYN6 164 aa20.92■□□□□ 0.94
CTSA-217ENST00000607482 ZDHHC14Q8IZN3 488 aa20.92■□□□□ 0.94
CTSA-217ENST00000607482 LRRC27Q9C0I9 530 aa20.92■□□□□ 0.94
CTSA-217ENST00000607482 SEL1LQ9UBV2 794 aa20.92■□□□□ 0.94
CTSA-217ENST00000607482 SORCS3Q9UPU3 1222 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms