RNA–Protein interactions for RNA: ENST00000607419.1

LINC01954-201, Transcript of long intergenic non-protein coding RNA 1954, humanhuman

TSL 1 (best) BASIC

Gene LINC01954, Length 461 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01954-201ENST00000607419 TRAF3IP3Q9Y228 551 aa11.29□□□□□ -0.6
LINC01954-201ENST00000607419 TNFSF13BQ9Y275 285 aa11.29□□□□□ -0.6
LINC01954-201ENST00000607419 USP15Q9Y4E8 981 aaPredicted RBP11.29□□□□□ -0.6
LINC01954-201ENST00000607419 ZFHX4Q86UP3 3567 aa11.28□□□□□ -0.6
LINC01954-201ENST00000607419 A0A1B0GUA9 196 aa11.28□□□□□ -0.6
LINC01954-201ENST00000607419 ANKRD63C9JTQ0 380 aa11.28□□□□□ -0.6
LINC01954-201ENST00000607419 ENPP3O14638 875 aa11.28□□□□□ -0.6
LINC01954-201ENST00000607419 N4BP3O15049 544 aa11.28□□□□□ -0.6
LINC01954-201ENST00000607419 B4GALT5O43286 388 aa11.28□□□□□ -0.6
LINC01954-201ENST00000607419 TGFB1I1O43294 461 aa11.28□□□□□ -0.6
LINC01954-201ENST00000607419 TOM1L1O75674 476 aa11.28□□□□□ -0.6
LINC01954-201ENST00000607419 KRT37O76014 449 aa11.28□□□□□ -0.6
LINC01954-201ENST00000607419 EDN1P05305 212 aa11.28□□□□□ -0.6
LINC01954-201ENST00000607419 ARF4P18085 180 aaPredicted RBP11.28□□□□□ -0.6
LINC01954-201ENST00000607419 GARTP22102 1010 aa11.28□□□□□ -0.6
LINC01954-201ENST00000607419 CD52P31358 61 aa11.28□□□□□ -0.6
LINC01954-201ENST00000607419 NDUFV1P49821 464 aa11.28□□□□□ -0.6
LINC01954-201ENST00000607419 NFX1Q12986 1120 aaKnown RBP11.28□□□□□ -0.6
LINC01954-201ENST00000607419 MYBPC2Q14324 1141 aa11.28□□□□□ -0.6
LINC01954-201ENST00000607419 NFIL3Q16649 462 aa11.28□□□□□ -0.6
LINC01954-201ENST00000607419 EDRF1Q3B7T1 1238 aa11.28□□□□□ -0.6
LINC01954-201ENST00000607419 ATF7IP2Q5U623 682 aa11.28□□□□□ -0.6
LINC01954-201ENST00000607419 C11orf57Q6ZUT1 292 aaPredicted RBP11.28□□□□□ -0.6
LINC01954-201ENST00000607419 APBB1IPQ7Z5R6 666 aaPredicted RBP11.28□□□□□ -0.6
LINC01954-201ENST00000607419 C12orf56Q8IXR9 622 aa11.28□□□□□ -0.6
LINC01954-201ENST00000607419 CRIPAKQ8N1N5 446 aa11.28□□□□□ -0.6
LINC01954-201ENST00000607419 TMEM105Q8N8V8 129 aa11.28□□□□□ -0.6
LINC01954-201ENST00000607419 TMEM174Q8WUU8 243 aa11.28□□□□□ -0.6
LINC01954-201ENST00000607419 SEPT8Q92599 483 aa11.28□□□□□ -0.6
LINC01954-201ENST00000607419 CCDC51Q96ER9 411 aa11.28□□□□□ -0.6
LINC01954-201ENST00000607419 BPIFA3Q9BQP9 254 aa11.28□□□□□ -0.6
LINC01954-201ENST00000607419 LMAN2LQ9H0V9 348 aa11.28□□□□□ -0.6
LINC01954-201ENST00000607419 TSPY26PQ9H489 355 aa11.28□□□□□ -0.6
LINC01954-201ENST00000607419 CDH22Q9UJ99 828 aa11.28□□□□□ -0.6
LINC01954-201ENST00000607419 STYXL1Q9Y6J8 313 aa11.28□□□□□ -0.6
LINC01954-201ENST00000607419 FAM186AA6NE01 2351 aa11.27□□□□□ -0.6
LINC01954-201ENST00000607419 MED19A0JLT2 244 aaPredicted RBP11.27□□□□□ -0.61
LINC01954-201ENST00000607419 TTLL13PA6NNM8 815 aa11.27□□□□□ -0.61
LINC01954-201ENST00000607419 PER2O15055 1255 aa11.27□□□□□ -0.61
LINC01954-201ENST00000607419 KIAA0391O15091 583 aaKnown RBP11.27□□□□□ -0.61
LINC01954-201ENST00000607419 CLDN3O15551 220 aa11.27□□□□□ -0.61
LINC01954-201ENST00000607419 ZSCAN20P17040 1043 aaPredicted RBP11.27□□□□□ -0.61
LINC01954-201ENST00000607419 PROZP22891 400 aa11.27□□□□□ -0.61
LINC01954-201ENST00000607419 RPL13P26373 211 aaKnown RBP11.27□□□□□ -0.61
LINC01954-201ENST00000607419 HOXA11P31270 313 aaPredicted RBP11.27□□□□□ -0.61
LINC01954-201ENST00000607419 NRIP1P48552 1158 aa11.27□□□□□ -0.61
LINC01954-201ENST00000607419 ZNF165P49910 485 aa11.27□□□□□ -0.61
LINC01954-201ENST00000607419 STX17P56962 302 aa11.27□□□□□ -0.61
LINC01954-201ENST00000607419 HSP90AA2PQ14568 343 aaPredicted RBP11.27□□□□□ -0.61
LINC01954-201ENST00000607419 ZCWPW2Q504Y3 356 aa11.27□□□□□ -0.61
LINC01954-201ENST00000607419 ANKRD40Q6AI12 368 aa11.27□□□□□ -0.61
LINC01954-201ENST00000607419 TTI2Q6NXR4 508 aa11.27□□□□□ -0.61
LINC01954-201ENST00000607419 ARMCX5Q6P1M9 558 aa11.27□□□□□ -0.61
LINC01954-201ENST00000607419 SLC39A4Q6P5W5 647 aa11.27□□□□□ -0.61
LINC01954-201ENST00000607419 NOTUMQ6P988 496 aa11.27□□□□□ -0.61
LINC01954-201ENST00000607419 MPZL3Q6UWV2 235 aa11.27□□□□□ -0.61
LINC01954-201ENST00000607419 SLC9A9Q8IVB4 645 aa11.27□□□□□ -0.61
LINC01954-201ENST00000607419 ENOX1Q8TC92 643 aaKnown RBP11.27□□□□□ -0.61
LINC01954-201ENST00000607419 LINC01599Q8WXQ3 324 aa11.27□□□□□ -0.61
LINC01954-201ENST00000607419 APBB2Q92870 758 aa11.27□□□□□ -0.61
LINC01954-201ENST00000607419 CPB2Q96IY4 423 aa11.27□□□□□ -0.61
LINC01954-201ENST00000607419 RIPOR3Q96MK2 946 aa11.27□□□□□ -0.61
LINC01954-201ENST00000607419 ADPGKQ9BRR6 497 aa11.27□□□□□ -0.61
LINC01954-201ENST00000607419 TCHPQ9BT92 498 aa11.27□□□□□ -0.61
LINC01954-201ENST00000607419 C11orf84Q9BUA3 381 aaPredicted RBP11.27□□□□□ -0.61
LINC01954-201ENST00000607419 FTHL17Q9BXU8 183 aa11.27□□□□□ -0.61
LINC01954-201ENST00000607419 IKZF4Q9H2S9 585 aa11.27□□□□□ -0.61
LINC01954-201ENST00000607419 PDZD7Q9H5P4 517 aa11.27□□□□□ -0.61
LINC01954-201ENST00000607419 PTPRHQ9HD43 1115 aa11.27□□□□□ -0.61
LINC01954-201ENST00000607419 AGPAT3Q9NRZ7 376 aa11.27□□□□□ -0.61
LINC01954-201ENST00000607419 PIN4Q9Y237 131 aaKnown RBP11.27□□□□□ -0.61
LINC01954-201ENST00000607419 USP20Q9Y2K6 914 aa11.27□□□□□ -0.61
LINC01954-201ENST00000607419 MRPL42Q9Y6G3 142 aaKnown RBP11.27□□□□□ -0.61
LINC01954-201ENST00000607419 RIF1Q5UIP0 2472 aaKnown RBP11.27□□□□□ -0.61
LINC01954-201ENST00000607419 TRIM49BA6NDI0 452 aa11.26□□□□□ -0.61
LINC01954-201ENST00000607419 TISP43B9A030 160 aa11.26□□□□□ -0.61
LINC01954-201ENST00000607419 ABLIM1O14639 778 aa11.26□□□□□ -0.61
LINC01954-201ENST00000607419 CLIC2O15247 247 aa11.26□□□□□ -0.61
LINC01954-201ENST00000607419 GALR2O43603 387 aaPredicted RBP11.26□□□□□ -0.61
LINC01954-201ENST00000607419 DGKIO75912 1065 aa11.26□□□□□ -0.61
LINC01954-201ENST00000607419 FGFR1OPO95684 399 aaKnown RBP11.26□□□□□ -0.61
LINC01954-201ENST00000607419 LDHAP00338 332 aaKnown RBP11.26□□□□□ -0.61
LINC01954-201ENST00000607419 NR3C1P04150 777 aa11.26□□□□□ -0.61
LINC01954-201ENST00000607419 MCF2P10911 925 aa11.26□□□□□ -0.61
LINC01954-201ENST00000607419 SP100P23497 879 aaPredicted RBP11.26□□□□□ -0.61
LINC01954-201ENST00000607419 NBL1P41271 181 aa11.26□□□□□ -0.61
LINC01954-201ENST00000607419 MATR3P43243 847 aaKnown RBP eCLIP11.26□□□□□ -0.61
LINC01954-201ENST00000607419 ID4P47928 161 aa11.26□□□□□ -0.61
LINC01954-201ENST00000607419 GATMP50440 423 aa11.26□□□□□ -0.61
LINC01954-201ENST00000607419 PMS1P54277 932 aaKnown RBP11.26□□□□□ -0.61
LINC01954-201ENST00000607419 FKBP3Q00688 224 aaKnown RBP11.26□□□□□ -0.61
LINC01954-201ENST00000607419 MCL1Q07820 350 aa11.26□□□□□ -0.61
LINC01954-201ENST00000607419 NOLC1Q14978 699 aaKnown RBP eCLIP11.26□□□□□ -0.61
LINC01954-201ENST00000607419 DCAF4L1Q3SXM0 396 aa11.26□□□□□ -0.61
LINC01954-201ENST00000607419 ZNF568Q3ZCX4 644 aa11.26□□□□□ -0.61
LINC01954-201ENST00000607419 SPATA1Q5VX52 437 aa11.26□□□□□ -0.61
LINC01954-201ENST00000607419 EEF1DP3Q658K8 133 aa11.26□□□□□ -0.61
LINC01954-201ENST00000607419 SLC27A1Q6PCB7 646 aa11.26□□□□□ -0.61
LINC01954-201ENST00000607419 EFHBQ8N7U6 833 aa11.26□□□□□ -0.61
LINC01954-201ENST00000607419 KLHL23Q8NBE8 558 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms