RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 ATP11BQ9Y2G3 1177 aa17.85■□□□□ 0.45
PMF1-206ENST00000606952 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.85■□□□□ 0.45
PMF1-206ENST00000606952 C9IYK1 514 aa17.84■□□□□ 0.45
PMF1-206ENST00000606952 EPHB6O15197 1021 aa17.84■□□□□ 0.45
PMF1-206ENST00000606952 VNN1O95497 513 aa17.84■□□□□ 0.45
PMF1-206ENST00000606952 EN2P19622 333 aaPredicted RBP17.84■□□□□ 0.45
PMF1-206ENST00000606952 SLC9A1P19634 815 aa17.84■□□□□ 0.45
PMF1-206ENST00000606952 FAM189BP81408 668 aa17.84■□□□□ 0.45
PMF1-206ENST00000606952 ZNF598Q86UK7 904 aaKnown RBP17.84■□□□□ 0.45
PMF1-206ENST00000606952 TC2NQ8N9U0 490 aa17.84■□□□□ 0.45
PMF1-206ENST00000606952 NEK11Q8NG66 645 aa17.84■□□□□ 0.45
PMF1-206ENST00000606952 CXorf38Q8TB03 319 aa17.84■□□□□ 0.45
PMF1-206ENST00000606952 LINC01599Q8WXQ3 324 aa17.84■□□□□ 0.45
PMF1-206ENST00000606952 CRACR2AQ9BSW2 395 aa17.84■□□□□ 0.45
PMF1-206ENST00000606952 LSM14BQ9BX40 385 aaKnown RBP17.84■□□□□ 0.45
PMF1-206ENST00000606952 TSPYL2Q9H2G4 693 aaPredicted RBP17.84■□□□□ 0.45
PMF1-206ENST00000606952 MMRN2Q9H8L6 949 aa17.84■□□□□ 0.45
PMF1-206ENST00000606952 C1orf112Q9NSG2 853 aa17.84■□□□□ 0.45
PMF1-206ENST00000606952 MYO6Q9UM54 1294 aa17.84■□□□□ 0.45
PMF1-206ENST00000606952 MFAP3LO75121 409 aa17.83■□□□□ 0.44
PMF1-206ENST00000606952 ATF7P17544 494 aaPredicted RBP17.83■□□□□ 0.44
PMF1-206ENST00000606952 TRIM21P19474 475 aaKnown RBP17.83■□□□□ 0.44
PMF1-206ENST00000606952 FXR1P51114 621 aaKnown RBP eCLIP17.83■□□□□ 0.44
PMF1-206ENST00000606952 ZBED6P86452 979 aa17.83■□□□□ 0.44
PMF1-206ENST00000606952 KLHDC7AQ5VTJ3 777 aa17.83■□□□□ 0.44
PMF1-206ENST00000606952 JADE1Q6IE81 842 aa17.83■□□□□ 0.44
PMF1-206ENST00000606952 TRAPPC11Q7Z392 1133 aa17.83■□□□□ 0.44
PMF1-206ENST00000606952 CCDC186Q7Z3E2 898 aa17.83■□□□□ 0.44
PMF1-206ENST00000606952 PPFIBP1Q86W92 1011 aa17.83■□□□□ 0.44
PMF1-206ENST00000606952 CNGA4Q8IV77 575 aa17.83■□□□□ 0.44
PMF1-206ENST00000606952 TAS1R2Q8TE23 839 aa17.83■□□□□ 0.44
PMF1-206ENST00000606952 CACTINQ8WUQ7 758 aaKnown RBP17.83■□□□□ 0.44
PMF1-206ENST00000606952 BAP1Q92560 729 aa17.83■□□□□ 0.44
PMF1-206ENST00000606952 FAXDC2Q96IV6 333 aa17.83■□□□□ 0.44
PMF1-206ENST00000606952 ANKRD36BP1Q96IX9 119 aa17.83■□□□□ 0.44
PMF1-206ENST00000606952 ADAM2Q99965 735 aa17.83■□□□□ 0.44
PMF1-206ENST00000606952 NAA15Q9BXJ9 866 aaKnown RBP17.83■□□□□ 0.44
PMF1-206ENST00000606952 RAB20Q9NX57 234 aa17.83■□□□□ 0.44
PMF1-206ENST00000606952 GIT1Q9Y2X7 761 aa17.83■□□□□ 0.44
PMF1-206ENST00000606952 HES2Q9Y543 173 aa17.83■□□□□ 0.44
PMF1-206ENST00000606952 AKR1B15C9JRZ8 316 aaPredicted RBP17.82■□□□□ 0.44
PMF1-206ENST00000606952 NFICP08651 508 aa17.82■□□□□ 0.44
PMF1-206ENST00000606952 TPM1P09493 284 aa17.82■□□□□ 0.44
PMF1-206ENST00000606952 TMEM191BP0C7N4 346 aa17.82■□□□□ 0.44
PMF1-206ENST00000606952 UCHL3P15374 230 aa17.82■□□□□ 0.44
PMF1-206ENST00000606952 HNRNPH3P31942 346 aaKnown RBP17.82■□□□□ 0.44
PMF1-206ENST00000606952 CASP14P31944 242 aa17.82■□□□□ 0.44
PMF1-206ENST00000606952 TMEM132DQ14C87 1099 aa17.82■□□□□ 0.44
PMF1-206ENST00000606952 LMBRD2Q68DH5 695 aaPredicted RBP17.82■□□□□ 0.44
PMF1-206ENST00000606952 RTN4RL1Q86UN2 441 aaPredicted RBP17.82■□□□□ 0.44
PMF1-206ENST00000606952 ECHDC2Q86YB7 292 aa17.82■□□□□ 0.44
PMF1-206ENST00000606952 SEPT8Q92599 483 aa17.82■□□□□ 0.44
PMF1-206ENST00000606952 SEMA4DQ92854 862 aa17.82■□□□□ 0.44
PMF1-206ENST00000606952 ABHD8Q96I13 439 aa17.82■□□□□ 0.44
PMF1-206ENST00000606952 PANX2Q96RD6 677 aa17.82■□□□□ 0.44
PMF1-206ENST00000606952 DNAJC7Q99615 494 aa17.82■□□□□ 0.44
PMF1-206ENST00000606952 MTMR12Q9C0I1 747 aa17.82■□□□□ 0.44
PMF1-206ENST00000606952 RNF39Q9H2S5 420 aa17.82■□□□□ 0.44
PMF1-206ENST00000606952 VRTNQ9H8Y1 702 aa17.82■□□□□ 0.44
PMF1-206ENST00000606952 UBN1Q9NPG3 1134 aa17.82■□□□□ 0.44
PMF1-206ENST00000606952 FAM207AQ9NSI2 230 aaPredicted RBP17.82■□□□□ 0.44
PMF1-206ENST00000606952 TMEM39AQ9NV64 488 aa17.82■□□□□ 0.44
PMF1-206ENST00000606952 APEX2Q9UBZ4 518 aa17.82■□□□□ 0.44
PMF1-206ENST00000606952 TTC3P53804 2025 aa17.82■□□□□ 0.44
PMF1-206ENST00000606952 TDRD15B5MCY1 1934 aaKnown RBP17.81■□□□□ 0.44
PMF1-206ENST00000606952 RNF225M0QZC1 329 aaPredicted RBP17.81■□□□□ 0.44
PMF1-206ENST00000606952 STAU1O95793 577 aaKnown RBP17.81■□□□□ 0.44
PMF1-206ENST00000606952 EOMESO95936 686 aa17.81■□□□□ 0.44
PMF1-206ENST00000606952 HLA-DRAP01903 254 aa17.81■□□□□ 0.44
PMF1-206ENST00000606952 TNNC2P02585 160 aa17.81■□□□□ 0.44
PMF1-206ENST00000606952 ACTN1P12814 892 aa17.81■□□□□ 0.44
PMF1-206ENST00000606952 ITGA4P13612 1032 aa17.81■□□□□ 0.44
PMF1-206ENST00000606952 CYP3A5P20815 502 aa17.81■□□□□ 0.44
PMF1-206ENST00000606952 AGMOQ6ZNB7 445 aa17.81■□□□□ 0.44
PMF1-206ENST00000606952 SLC24A5Q71RS6 500 aa17.81■□□□□ 0.44
PMF1-206ENST00000606952 C1orf127Q8N9H9 656 aa17.81■□□□□ 0.44
PMF1-206ENST00000606952 DBF4BQ8NFT6 615 aa17.81■□□□□ 0.44
PMF1-206ENST00000606952 PGBD4Q96DM1 585 aa17.81■□□□□ 0.44
PMF1-206ENST00000606952 VWCEQ96DN2 955 aa17.81■□□□□ 0.44
PMF1-206ENST00000606952 FAM81BQ96LP2 452 aa17.81■□□□□ 0.44
PMF1-206ENST00000606952 PCMTD1Q96MG8 357 aaPredicted RBP17.81■□□□□ 0.44
PMF1-206ENST00000606952 NUCKS1Q9H1E3 243 aaKnown RBP17.81■□□□□ 0.44
PMF1-206ENST00000606952 ELAC1Q9H777 363 aaKnown RBP17.81■□□□□ 0.44
PMF1-206ENST00000606952 ITGA11Q9UKX5 1188 aa17.81■□□□□ 0.44
PMF1-206ENST00000606952 LUC7L2Q9Y383 392 aaKnown RBP17.81■□□□□ 0.44
PMF1-206ENST00000606952 ASS1P00966 412 aaKnown RBP17.8■□□□□ 0.44
PMF1-206ENST00000606952 TIMP1P01033 207 aa17.8■□□□□ 0.44
PMF1-206ENST00000606952 CYP2C18P33260 490 aa17.8■□□□□ 0.44
PMF1-206ENST00000606952 JAM2P57087 298 aa17.8■□□□□ 0.44
PMF1-206ENST00000606952 TFAMQ00059 246 aaKnown RBP17.8■□□□□ 0.44
PMF1-206ENST00000606952 LRRC8AQ8IWT6 810 aa17.8■□□□□ 0.44
PMF1-206ENST00000606952 GSTCDQ8NEC7 633 aa17.8■□□□□ 0.44
PMF1-206ENST00000606952 RSPH1Q8WYR4 309 aa17.8■□□□□ 0.44
PMF1-206ENST00000606952 TAF4BQ92750 862 aa17.8■□□□□ 0.44
PMF1-206ENST00000606952 SYN2Q92777 582 aaPredicted RBP17.8■□□□□ 0.44
PMF1-206ENST00000606952 FAM212AQ96EL1 285 aa17.8■□□□□ 0.44
PMF1-206ENST00000606952 ZMAT2Q96NC0 199 aaKnown RBP17.8■□□□□ 0.44
PMF1-206ENST00000606952 PPP1R10Q96QC0 940 aaKnown RBP17.8■□□□□ 0.44
PMF1-206ENST00000606952 PPP1R12CQ9BZL4 782 aa17.8■□□□□ 0.44
PMF1-206ENST00000606952 SIX4Q9UIU6 781 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms