RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 CORO7P57737 925 aa12.62□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 MCCD1P59942 119 aaPredicted RBP12.62□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 GCNT1Q02742 428 aa12.62□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 PTGISQ16647 500 aa12.62□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 C15orf39Q6ZRI6 1047 aa12.62□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 USP37Q86T82 979 aa12.62□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 MDM1Q8TC05 714 aa12.62□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 PSPC1Q8WXF1 523 aaKnown RBP12.62□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 FAM118BQ9BPY3 351 aa12.62□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 EPN3Q9H201 632 aa12.62□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 APOBEC3GQ9HC16 384 aaKnown RBP12.62□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 UMODL1Q5DID0 1318 aa12.62□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 FAM187AA6NFU0 413 aa12.62□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 C19orf81C9J6K1 198 aa12.62□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 GJB6O95452 261 aa12.62□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 C4BPAP04003 597 aaKnown RBP12.62□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 UNGP13051 313 aaPredicted RBP12.62□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 FGFR4P22455 802 aa12.62□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 GTF2H1P32780 548 aa12.62□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 NF2P35240 595 aa12.62□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 COILP38432 576 aaPredicted RBP12.62□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 PIK3CAP42336 1068 aa12.62□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 PMS2P54278 862 aa12.62□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 OAZ1P54368 228 aa12.62□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 RWDD2BP57060 319 aa12.62□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 STRN3Q13033 797 aa12.62□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 SLC29A2Q14542 456 aa12.62□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 ZACNQ401N2 412 aa12.62□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 EMC10Q5UCC4 262 aa12.62□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 RUFY4Q6ZNE9 571 aa12.62□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 MCOLN2Q8IZK6 566 aa12.62□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 OR5B17Q8NGF7 314 aa12.62□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 C12orf42Q96LP6 360 aa12.62□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 RASSF4Q9H2L5 321 aa12.62□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 HOXC10Q9NYD6 342 aa12.62□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 UVRAGQ9P2Y5 699 aa12.62□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 PCYOX1Q9UHG3 505 aa12.62□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 POLR2AP24928 1970 aaKnown RBP12.62□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 NFASCO94856 1347 aa12.62□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 MYPNQ86TC9 1320 aa12.62□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 DKC1O60832 514 aaKnown RBP eCLIP12.61□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 TRIP13Q15645 432 aaPredicted RBP12.61□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 STXBP2Q15833 593 aa12.61□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 PPP2R5EQ16537 467 aa12.61□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 TMEM270Q6UE05 265 aa12.61□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 CCDC25Q86WR0 208 aa12.61□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 C1orf131Q8NDD1 294 aaKnown RBP12.61□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 DEPTORQ8TB45 409 aa12.61□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 CDHR1Q96JP9 859 aa12.61□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 ZNF668Q96K58 619 aaPredicted RBP12.61□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 CCT8L2Q96SF2 557 aa12.61□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 SLC12A6Q9UHW9 1150 aa12.61□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 AFG3L2Q9Y4W6 797 aa12.61□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 PHIPQ8WWQ0 1821 aa12.61□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 MROH7Q68CQ1 1323 aa12.61□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 OATP04181 439 aa12.61□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 WDR44Q5JSH3 913 aa12.61□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 C11orf70Q9BRQ4 267 aa12.61□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 HEMGNQ9BXL5 484 aa12.61□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 PORCNQ9H237 461 aa12.61□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 CHST7Q9NS84 486 aa12.61□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 RBAKQ9NYW8 714 aaPredicted RBP12.61□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 RASAL2Q9UJF2 1139 aa12.61□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 MAFBQ9Y5Q3 323 aaPredicted RBP12.61□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 SLCO1A2P46721 670 aa12.61□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 RTP1P59025 263 aa12.61□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 NLRP14Q86W24 1093 aa12.61□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 MSTO1Q9BUK6 570 aa12.61□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 PABPC3Q9H361 631 aaKnown RBP12.61□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 DHX33Q9H6R0 707 aaKnown RBP12.61□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 PCDHB2Q9Y5E7 798 aa12.61□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 DOCK1Q14185 1865 aa12.6□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 ERLIN2O94905 339 aa12.6□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 GJC1P36383 396 aa12.6□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 PSMD6Q15008 389 aa12.6□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 MYCBPAPQ8TBZ2 947 aa12.6□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 SLC7A3Q8WY07 619 aa12.6□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 PCYT2Q99447 389 aa12.6□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 DNAJC17Q9NVM6 304 aaKnown RBP12.6□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 BTBD7Q9P203 1132 aa12.6□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 MTUS1Q9ULD2 1270 aa12.6□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 NUB1Q9Y5A7 615 aa12.6□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 PCDHB4Q9Y5E5 795 aa12.6□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 ATP2A1O14983 1001 aa12.6□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 UBA1P22314 1058 aaKnown RBP12.6□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 MARK3P27448 753 aa12.6□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 TNFSF9P41273 254 aa12.6□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 NSFP46459 744 aaKnown RBP12.6□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 LIG3P49916 1009 aa12.6□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 DRG2P55039 364 aaKnown RBP12.6□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 PPP2R2AP63151 447 aa12.6□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 PPP1R7Q15435 360 aa12.6□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 SGO2Q562F6 1265 aa12.6□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 ZBTB33Q86T24 672 aa12.6□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 ZNF473Q8WTR7 871 aaKnown RBP12.6□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 FAM212AQ96EL1 285 aa12.6□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 GSTTP1A0A1W2PQM5 241 aa12.59□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 PODXLO00592 558 aa12.59□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 HSPA6P17066 643 aa12.59□□□□□ -0.39
HMGN3-AS1-201ENST00000604516 ACO1P21399 889 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms