RNA–Protein interactions for RNA: ENST00000602015.5

FARP1-238, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

TSL 5

Gene FARP1, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-238	ENST00000602015	FAM189B	P81408	668 aa		5.89	□□□□□ -1.47
FARP1-238	ENST00000602015	OCRL	Q01968	901 aa		5.89	□□□□□ -1.47
FARP1-238	ENST00000602015	APBA1	Q02410	837 aa		5.89	□□□□□ -1.47
FARP1-238	ENST00000602015	ABHD17B	Q5VST6	288 aa		5.89	□□□□□ -1.47
FARP1-238	ENST00000602015	LINC00476	Q8WZB0	136 aa		5.89	□□□□□ -1.47
FARP1-238	ENST00000602015	CDC5L	Q99459	802 aa	Known RBP	5.89	□□□□□ -1.47
FARP1-238	ENST00000602015	DKK2	Q9UBU2	259 aa		5.89	□□□□□ -1.47
FARP1-238	ENST00000602015	KCNG1	Q9UIX4	513 aa		5.89	□□□□□ -1.47
FARP1-238	ENST00000602015	NUMBL	Q9Y6R0	609 aa		5.89	□□□□□ -1.47
FARP1-238	ENST00000602015	DCC	P43146	1447 aa		5.89	□□□□□ -1.47
FARP1-238	ENST00000602015	PIPSL	A2A3N6	862 aa		5.88	□□□□□ -1.47
FARP1-238	ENST00000602015	ZSCAN20	P17040	1043 aa	Predicted RBP	5.88	□□□□□ -1.47
FARP1-238	ENST00000602015	MEF2A	Q02078	507 aa	Predicted RBP	5.88	□□□□□ -1.47
FARP1-238	ENST00000602015	NHLH2	Q02577	135 aa		5.88	□□□□□ -1.47
FARP1-238	ENST00000602015	PABPC4	Q13310	644 aa	Known RBP eCLIP	5.88	□□□□□ -1.47
FARP1-238	ENST00000602015	SQSTM1	Q13501	440 aa		5.88	□□□□□ -1.47
FARP1-238	ENST00000602015	EFCAB12	Q6NXP0	572 aa		5.88	□□□□□ -1.47
FARP1-238	ENST00000602015	RD3	Q7Z3Z2	195 aa		5.88	□□□□□ -1.47
FARP1-238	ENST00000602015	CMTR2	Q8IYT2	770 aa	Known RBP	5.88	□□□□□ -1.47
FARP1-238	ENST00000602015	MRFAP1L1	Q96HT8	127 aa		5.88	□□□□□ -1.47
FARP1-238	ENST00000602015	PIK3R4	Q99570	1358 aa		5.88	□□□□□ -1.47
FARP1-238	ENST00000602015	PTCH1	Q13635	1447 aa		5.88	□□□□□ -1.47
FARP1-238	ENST00000602015	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	5.88	□□□□□ -1.47
FARP1-238	ENST00000602015	PPP1R12A	O14974	1030 aa	Predicted RBP	5.87	□□□□□ -1.47
FARP1-238	ENST00000602015	LTA4H	P09960	611 aa	Known RBP	5.87	□□□□□ -1.47
FARP1-238	ENST00000602015	CLEC2L	P0C7M8	214 aa		5.87	□□□□□ -1.47
FARP1-238	ENST00000602015	POU3F2	P20265	443 aa	Predicted RBP	5.87	□□□□□ -1.47
FARP1-238	ENST00000602015	LSP1	P33241	339 aa		5.87	□□□□□ -1.47
FARP1-238	ENST00000602015	CLK3	P49761	638 aa	Known RBP	5.87	□□□□□ -1.47
FARP1-238	ENST00000602015	NEK4	P51957	841 aa		5.87	□□□□□ -1.47
FARP1-238	ENST00000602015	KPNA1	P52294	538 aa	Predicted RBP	5.87	□□□□□ -1.47
FARP1-238	ENST00000602015	SEC24C	P53992	1094 aa		5.87	□□□□□ -1.47
FARP1-238	ENST00000602015	ELL	P55199	621 aa	Predicted RBP	5.87	□□□□□ -1.47
FARP1-238	ENST00000602015	RNASE9	P60153	205 aa	Known RBP	5.87	□□□□□ -1.47
FARP1-238	ENST00000602015	PHC1	P78364	1004 aa		5.87	□□□□□ -1.47
FARP1-238	ENST00000602015	DSG1	Q02413	1049 aa		5.87	□□□□□ -1.47
FARP1-238	ENST00000602015	MGAT5	Q09328	741 aa		5.87	□□□□□ -1.47
FARP1-238	ENST00000602015	PRR16	Q569H4	304 aa		5.87	□□□□□ -1.47
FARP1-238	ENST00000602015	C19orf54	Q5BKX5	351 aa		5.87	□□□□□ -1.47
FARP1-238	ENST00000602015	COLEC12	Q5KU26	742 aa		5.87	□□□□□ -1.47
FARP1-238	ENST00000602015	PDZD4	Q76G19	769 aa	Predicted RBP	5.87	□□□□□ -1.47
FARP1-238	ENST00000602015	XYLT1	Q86Y38	959 aa		5.87	□□□□□ -1.47
FARP1-238	ENST00000602015	OR10H5	Q8NGA6	315 aa		5.87	□□□□□ -1.47
FARP1-238	ENST00000602015	ZNF496	Q96IT1	587 aa	Predicted RBP	5.87	□□□□□ -1.47
FARP1-238	ENST00000602015	PAWR	Q96IZ0	340 aa	Known RBP	5.87	□□□□□ -1.47
FARP1-238	ENST00000602015	FDXACB1	Q9BRP7	624 aa	Predicted RBP	5.87	□□□□□ -1.47
FARP1-238	ENST00000602015	H2AFY2	Q9P0M6	372 aa	Predicted RBP	5.87	□□□□□ -1.47
FARP1-238	ENST00000602015	EPN1	Q9Y6I3	576 aa	Predicted RBP	5.87	□□□□□ -1.47
FARP1-238	ENST00000602015	MTUS2	Q5JR59	1369 aa		5.87	□□□□□ -1.47
FARP1-238	ENST00000602015	PLEKHG1	Q9ULL1	1385 aa		5.87	□□□□□ -1.47
FARP1-238	ENST00000602015	EFCAB6	Q5THR3	1501 aa		5.87	□□□□□ -1.47
FARP1-238	ENST00000602015	CFAP65	Q6ZU64	1925 aa	Known RBP	5.86	□□□□□ -1.47
FARP1-238	ENST00000602015	ASXL1	Q8IXJ9	1541 aa		5.86	□□□□□ -1.47
FARP1-238	ENST00000602015	CCDC141	Q6ZP82	1450 aa		5.86	□□□□□ -1.47
FARP1-238	ENST00000602015	LEFTY2	O00292	366 aa		5.86	□□□□□ -1.47
FARP1-238	ENST00000602015	ASMTL	O95671	621 aa		5.86	□□□□□ -1.47
FARP1-238	ENST00000602015	GAST	P01350	101 aa		5.86	□□□□□ -1.47
FARP1-238	ENST00000602015	DDX6	P26196	483 aa	Known RBP eCLIP	5.86	□□□□□ -1.47
FARP1-238	ENST00000602015	SART3	Q15020	963 aa	Known RBP	5.86	□□□□□ -1.47
FARP1-238	ENST00000602015	UBE3C	Q15386	1083 aa		5.86	□□□□□ -1.47
FARP1-238	ENST00000602015	MSL3	Q8N5Y2	521 aa	Known RBP	5.86	□□□□□ -1.47
FARP1-238	ENST00000602015	ZNF610	Q8N9Z0	462 aa		5.86	□□□□□ -1.47
FARP1-238	ENST00000602015	CPEB3	Q8NE35	698 aa	Known RBP	5.86	□□□□□ -1.47
FARP1-238	ENST00000602015	CHTF18	Q8WVB6	975 aa		5.86	□□□□□ -1.47
FARP1-238	ENST00000602015	SLC52A1	Q9NWF4	448 aa		5.86	□□□□□ -1.47
FARP1-238	ENST00000602015	TMEM260	Q9NX78	707 aa		5.86	□□□□□ -1.47
FARP1-238	ENST00000602015	POGK	Q9P215	609 aa		5.86	□□□□□ -1.47
FARP1-238	ENST00000602015	PIK3C2B	O00750	1634 aa		5.85	□□□□□ -1.47
FARP1-238	ENST00000602015	UNC13B	O14795	1591 aa		5.85	□□□□□ -1.47
FARP1-238	ENST00000602015	ZFYVE9	O95405	1425 aa		5.85	□□□□□ -1.47
FARP1-238	ENST00000602015	MST1R	Q04912	1400 aa		5.85	□□□□□ -1.47
FARP1-238	ENST00000602015	TBKBP1	A7MCY6	615 aa		5.85	□□□□□ -1.47
FARP1-238	ENST00000602015	TSPY4	P0CV99	314 aa		5.85	□□□□□ -1.47
FARP1-238	ENST00000602015	TSPY10	P0CW01	314 aa		5.85	□□□□□ -1.47
FARP1-238	ENST00000602015	CXCR5	P32302	372 aa		5.85	□□□□□ -1.47
FARP1-238	ENST00000602015	PTTG1IP	P53801	180 aa		5.85	□□□□□ -1.47
FARP1-238	ENST00000602015	C1QTNF8	P60827	252 aa		5.85	□□□□□ -1.47
FARP1-238	ENST00000602015	TCEA2	Q15560	299 aa		5.85	□□□□□ -1.47
FARP1-238	ENST00000602015	ZBTB41	Q5SVQ8	909 aa		5.85	□□□□□ -1.47
FARP1-238	ENST00000602015	FBXO42	Q6P3S6	717 aa		5.85	□□□□□ -1.47
FARP1-238	ENST00000602015	FRMD7	Q6ZUT3	714 aa		5.85	□□□□□ -1.47
FARP1-238	ENST00000602015	ZFP28	Q8NHY6	868 aa		5.85	□□□□□ -1.47
FARP1-238	ENST00000602015	SH3TC2	Q8TF17	1288 aa		5.85	□□□□□ -1.47
FARP1-238	ENST00000602015	THG1L	Q9NWX6	298 aa	Known RBP	5.85	□□□□□ -1.47
FARP1-238	ENST00000602015	FPGT-TNNI3K	V9GXZ4	949 aa		5.85	□□□□□ -1.47
FARP1-238	ENST00000602015	FYCO1	Q9BQS8	1478 aa		5.84	□□□□□ -1.47
FARP1-238	ENST00000602015	KPNA6	O60684	536 aa		5.84	□□□□□ -1.47
FARP1-238	ENST00000602015	ESRRB	O95718	433 aa		5.84	□□□□□ -1.47
FARP1-238	ENST00000602015	ZNF37A	P17032	561 aa	Predicted RBP	5.84	□□□□□ -1.47
FARP1-238	ENST00000602015	TYRP1	P17643	537 aa		5.84	□□□□□ -1.47
FARP1-238	ENST00000602015	PPARA	Q07869	468 aa		5.84	□□□□□ -1.47
FARP1-238	ENST00000602015	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	5.84	□□□□□ -1.47
FARP1-238	ENST00000602015	NXPE1	Q8N323	547 aa		5.84	□□□□□ -1.47
FARP1-238	ENST00000602015	OR14C36	Q8NHC7	312 aa		5.84	□□□□□ -1.47
FARP1-238	ENST00000602015	CAGE1	Q8TC20	777 aa		5.84	□□□□□ -1.47
FARP1-238	ENST00000602015	TFAP2C	Q92754	450 aa		5.84	□□□□□ -1.47
FARP1-238	ENST00000602015	NAF1	Q96HR8	494 aa	Known RBP	5.84	□□□□□ -1.47
FARP1-238	ENST00000602015	RNF181	Q9P0P0	153 aa		5.84	□□□□□ -1.47
FARP1-238	ENST00000602015	LAMC1	P11047	1609 aa		5.84	□□□□□ -1.47
FARP1-238	ENST00000602015	EIF2AK4	Q9P2K8	1649 aa	Known RBP	5.84	□□□□□ -1.47

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