RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 KCTD10Q9H3F6 313 aa10.94□□□□□ -0.66
UPF1-213ENST00000601981 RPF1Q9H9Y2 349 aaKnown RBP10.94□□□□□ -0.66
UPF1-213ENST00000601981 KIAA1586Q9HCI6 787 aa10.94□□□□□ -0.66
UPF1-213ENST00000601981 SNTG2Q9NY99 539 aa10.94□□□□□ -0.66
UPF1-213ENST00000601981 HES2Q9Y543 173 aa10.94□□□□□ -0.66
UPF1-213ENST00000601981 STYXL1Q9Y6J8 313 aa10.94□□□□□ -0.66
UPF1-213ENST00000601981 A0A1W2PQC6 194 aa10.93□□□□□ -0.66
UPF1-213ENST00000601981 ARL5CA6NH57 179 aa10.93□□□□□ -0.66
UPF1-213ENST00000601981 ABLIM1O14639 778 aa10.93□□□□□ -0.66
UPF1-213ENST00000601981 XPOTO43592 962 aaKnown RBP10.93□□□□□ -0.66
UPF1-213ENST00000601981 OFD1O75665 1012 aa10.93□□□□□ -0.66
UPF1-213ENST00000601981 RECQL4O94761 1208 aa10.93□□□□□ -0.66
UPF1-213ENST00000601981 GNA14O95837 355 aa10.93□□□□□ -0.66
UPF1-213ENST00000601981 CA3P07451 260 aa10.93□□□□□ -0.66
UPF1-213ENST00000601981 LAG3P18627 525 aa10.93□□□□□ -0.66
UPF1-213ENST00000601981 AKAP5P24588 427 aa10.93□□□□□ -0.66
UPF1-213ENST00000601981 RPL13P26373 211 aaKnown RBP10.93□□□□□ -0.66
UPF1-213ENST00000601981 MLH1P40692 756 aa10.93□□□□□ -0.66
UPF1-213ENST00000601981 OSTNP61366 133 aa10.93□□□□□ -0.66
UPF1-213ENST00000601981 FKBP3Q00688 224 aaKnown RBP10.93□□□□□ -0.66
UPF1-213ENST00000601981 POU5F1Q01860 360 aaKnown RBP10.93□□□□□ -0.66
UPF1-213ENST00000601981 GRIK3Q13003 919 aa10.93□□□□□ -0.66
UPF1-213ENST00000601981 TRIM14Q14142 442 aa10.93□□□□□ -0.66
UPF1-213ENST00000601981 ARID5BQ14865 1188 aa10.93□□□□□ -0.66
UPF1-213ENST00000601981 CLLU1OSQ5K130 101 aa10.93□□□□□ -0.66
UPF1-213ENST00000601981 FAM109BQ6ICB4 259 aaPredicted RBP10.93□□□□□ -0.66
UPF1-213ENST00000601981 SLC39A4Q6P5W5 647 aa10.93□□□□□ -0.66
UPF1-213ENST00000601981 AGMOQ6ZNB7 445 aa10.93□□□□□ -0.66
UPF1-213ENST00000601981 CD302Q8IX05 232 aa10.93□□□□□ -0.66
UPF1-213ENST00000601981 GPD1LQ8N335 351 aa10.93□□□□□ -0.66
UPF1-213ENST00000601981 KIAA1524Q8TCG1 905 aa10.93□□□□□ -0.66
UPF1-213ENST00000601981 SP7Q8TDD2 431 aaPredicted RBP10.93□□□□□ -0.66
UPF1-213ENST00000601981 TSPAN18Q96SJ8 248 aa10.93□□□□□ -0.66
UPF1-213ENST00000601981 TUBGCP2Q9BSJ2 902 aa10.93□□□□□ -0.66
UPF1-213ENST00000601981 VPS16Q9H269 839 aa10.93□□□□□ -0.66
UPF1-213ENST00000601981 PLEKHA5Q9HAU0 1116 aa10.93□□□□□ -0.66
UPF1-213ENST00000601981 RC3H2Q9HBD1 1191 aaKnown RBP10.93□□□□□ -0.66
UPF1-213ENST00000601981 AGPAT3Q9NRZ7 376 aa10.93□□□□□ -0.66
UPF1-213ENST00000601981 SLC38A7Q9NVC3 462 aa10.93□□□□□ -0.66
UPF1-213ENST00000601981 PYCARDQ9ULZ3 195 aa10.93□□□□□ -0.66
UPF1-213ENST00000601981 TRAF3IP3Q9Y228 551 aa10.93□□□□□ -0.66
UPF1-213ENST00000601981 ANKRD63C9JTQ0 380 aa10.92□□□□□ -0.66
UPF1-213ENST00000601981 SOX1O00570 391 aaPredicted RBP10.92□□□□□ -0.66
UPF1-213ENST00000601981 INPPL1O15357 1258 aa10.92□□□□□ -0.66
UPF1-213ENST00000601981 EXTL3O43909 919 aa10.92□□□□□ -0.66
UPF1-213ENST00000601981 IL18RAPO95256 599 aa10.92□□□□□ -0.66
UPF1-213ENST00000601981 THP07101 528 aa10.92□□□□□ -0.66
UPF1-213ENST00000601981 PRKCSHP14314 528 aaPredicted RBP10.92□□□□□ -0.66
UPF1-213ENST00000601981 PPM1AP35813 382 aa10.92□□□□□ -0.66
UPF1-213ENST00000601981 MTIF2P46199 727 aaKnown RBP10.92□□□□□ -0.66
UPF1-213ENST00000601981 MARSP56192 900 aaKnown RBP10.92□□□□□ -0.66
UPF1-213ENST00000601981 UBXN1Q04323 297 aa10.92□□□□□ -0.66
UPF1-213ENST00000601981 MYBPC2Q14324 1141 aa10.92□□□□□ -0.66
UPF1-213ENST00000601981 SURF1Q15526 300 aa10.92□□□□□ -0.66
UPF1-213ENST00000601981 NFIL3Q16649 462 aa10.92□□□□□ -0.66
UPF1-213ENST00000601981 ZNF697Q5TEC3 545 aa10.92□□□□□ -0.66
UPF1-213ENST00000601981 GPR153Q6NV75 609 aa10.92□□□□□ -0.66
UPF1-213ENST00000601981 USP37Q86T82 979 aa10.92□□□□□ -0.66
UPF1-213ENST00000601981 C12orf56Q8IXR9 622 aa10.92□□□□□ -0.66
UPF1-213ENST00000601981 CEP120Q8N960 986 aa10.92□□□□□ -0.66
UPF1-213ENST00000601981 XXYLT1Q8NBI6 393 aa10.92□□□□□ -0.66
UPF1-213ENST00000601981 CASD1Q96PB1 797 aa10.92□□□□□ -0.66
UPF1-213ENST00000601981 TGS1Q96RS0 853 aaKnown RBP10.92□□□□□ -0.66
UPF1-213ENST00000601981 GAD1Q99259 594 aa10.92□□□□□ -0.66
UPF1-213ENST00000601981 CBWD1Q9BRT8 395 aa10.92□□□□□ -0.66
UPF1-213ENST00000601981 FAM213AQ9BRX8 229 aa10.92□□□□□ -0.66
UPF1-213ENST00000601981 NKX2-4Q9H2Z4 354 aa10.92□□□□□ -0.66
UPF1-213ENST00000601981 SPTLC3Q9NUV7 552 aa10.92□□□□□ -0.66
UPF1-213ENST00000601981 HSPBP1Q9NZL4 362 aa10.92□□□□□ -0.66
UPF1-213ENST00000601981 FRMD4BQ9Y2L6 1034 aa10.92□□□□□ -0.66
UPF1-213ENST00000601981 PCDHB12Q9Y5F1 795 aa10.92□□□□□ -0.66
UPF1-213ENST00000601981 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.92□□□□□ -0.66
UPF1-213ENST00000601981 LINC01553A4QN01 128 aa10.91□□□□□ -0.66
UPF1-213ENST00000601981 ZNF233A6NK53 670 aa10.91□□□□□ -0.66
UPF1-213ENST00000601981 MEIS3P2A8K0S8 358 aa10.91□□□□□ -0.66
UPF1-213ENST00000601981 TISP43B9A030 160 aa10.91□□□□□ -0.66
UPF1-213ENST00000601981 CETN3O15182 167 aa10.91□□□□□ -0.66
UPF1-213ENST00000601981 EXOC3O60645 756 aa10.91□□□□□ -0.66
UPF1-213ENST00000601981 POMCP01189 267 aa10.91□□□□□ -0.66
UPF1-213ENST00000601981 NR3C1P04150 777 aa10.91□□□□□ -0.66
UPF1-213ENST00000601981 TPM1P09493 284 aa10.91□□□□□ -0.66
UPF1-213ENST00000601981 CXCL8P10145 99 aa10.91□□□□□ -0.66
UPF1-213ENST00000601981 SKILP12757 684 aa10.91□□□□□ -0.66
UPF1-213ENST00000601981 ADSSP30520 456 aa10.91□□□□□ -0.66
UPF1-213ENST00000601981 CTNNB1P35222 781 aa10.91□□□□□ -0.66
UPF1-213ENST00000601981 HOXD13P35453 343 aa10.91□□□□□ -0.66
UPF1-213ENST00000601981 PBX2P40425 430 aa10.91□□□□□ -0.66
UPF1-213ENST00000601981 ALDH7A1P49419 539 aaKnown RBP10.91□□□□□ -0.66
UPF1-213ENST00000601981 ACOT2P49753 483 aa10.91□□□□□ -0.66
UPF1-213ENST00000601981 GATMP50440 423 aa10.91□□□□□ -0.66
UPF1-213ENST00000601981 SCNN1GP51170 649 aa10.91□□□□□ -0.66
UPF1-213ENST00000601981 CYP2J2P51589 502 aa10.91□□□□□ -0.66
UPF1-213ENST00000601981 MAN2A1Q16706 1144 aa10.91□□□□□ -0.66
UPF1-213ENST00000601981 PPFIBP1Q86W92 1011 aa10.91□□□□□ -0.66
UPF1-213ENST00000601981 NT5DC4Q86YG4 428 aa10.91□□□□□ -0.66
UPF1-213ENST00000601981 SLC9A9Q8IVB4 645 aa10.91□□□□□ -0.66
UPF1-213ENST00000601981 IQCDQ96DY2 449 aa10.91□□□□□ -0.66
UPF1-213ENST00000601981 FAM212AQ96EL1 285 aa10.91□□□□□ -0.66
UPF1-213ENST00000601981 SAAL1Q96ER3 474 aa10.91□□□□□ -0.66
UPF1-213ENST00000601981 LRCH3Q96II8 777 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms