RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 EIF2AQ9BY44 585 aaKnown RBP19.42■□□□□ 0.7
VRK3-225ENST00000601912 IMPG2Q9BZV3 1241 aa19.42■□□□□ 0.7
VRK3-225ENST00000601912 TRPV6Q9H1D0 765 aa19.42■□□□□ 0.7
VRK3-225ENST00000601912 PLEKHA5Q9HAU0 1116 aa19.42■□□□□ 0.7
VRK3-225ENST00000601912 CHST12Q9NRB3 414 aa19.42■□□□□ 0.7
VRK3-225ENST00000601912 C1orf112Q9NSG2 853 aa19.42■□□□□ 0.7
VRK3-225ENST00000601912 BZW2Q9Y6E2 419 aaKnown RBP19.42■□□□□ 0.7
VRK3-225ENST00000601912 EPN1Q9Y6I3 576 aaPredicted RBP19.42■□□□□ 0.7
VRK3-225ENST00000601912 NCOA4Q13772 614 aa19.41■□□□□ 0.7
VRK3-225ENST00000601912 MTF1Q14872 753 aa19.41■□□□□ 0.7
VRK3-225ENST00000601912 TRIM71Q2Q1W2 868 aaKnown RBP19.41■□□□□ 0.7
VRK3-225ENST00000601912 SLC10A6Q3KNW5 377 aa19.41■□□□□ 0.7
VRK3-225ENST00000601912 TDRD12Q587J7 1177 aaKnown RBP19.41■□□□□ 0.7
VRK3-225ENST00000601912 FAM26DQ5JW98 314 aa19.41■□□□□ 0.7
VRK3-225ENST00000601912 TWF2Q6IBS0 349 aaKnown RBP19.41■□□□□ 0.7
VRK3-225ENST00000601912 TRAPPC11Q7Z392 1133 aa19.41■□□□□ 0.7
VRK3-225ENST00000601912 NT5DC4Q86YG4 428 aa19.41■□□□□ 0.7
VRK3-225ENST00000601912 MTMR12Q9C0I1 747 aa19.41■□□□□ 0.7
VRK3-225ENST00000601912 DEF6Q9H4E7 631 aa19.41■□□□□ 0.7
VRK3-225ENST00000601912 F8VZ95 297 aa19.4■□□□□ 0.7
VRK3-225ENST00000601912 LRRN2O75325 713 aa19.4■□□□□ 0.7
VRK3-225ENST00000601912 IPO7O95373 1038 aaKnown RBP19.4■□□□□ 0.7
VRK3-225ENST00000601912 CCDC175P0C221 793 aa19.4■□□□□ 0.7
VRK3-225ENST00000601912 FERP16591 822 aa19.4■□□□□ 0.7
VRK3-225ENST00000601912 SOX5P35711 763 aa19.4■□□□□ 0.7
VRK3-225ENST00000601912 ARID5AQ03989 594 aa19.4■□□□□ 0.7
VRK3-225ENST00000601912 KLHL30Q0D2K2 578 aa19.4■□□□□ 0.7
VRK3-225ENST00000601912 TRPC3Q13507 836 aa19.4■□□□□ 0.7
VRK3-225ENST00000601912 ARHGAP44Q17R89 818 aa19.4■□□□□ 0.7
VRK3-225ENST00000601912 TOGARAM2Q6ZUX3 1019 aa19.4■□□□□ 0.7
VRK3-225ENST00000601912 ENOSF1Q7L5Y1 443 aa19.4■□□□□ 0.7
VRK3-225ENST00000601912 ARHGEF19Q8IW93 802 aa19.4■□□□□ 0.7
VRK3-225ENST00000601912 USP38Q8NB14 1042 aa19.4■□□□□ 0.7
VRK3-225ENST00000601912 FAM84AQ96KN4 292 aa19.4■□□□□ 0.7
VRK3-225ENST00000601912 SPTLC3Q9NUV7 552 aa19.4■□□□□ 0.7
VRK3-225ENST00000601912 TRMT1Q9NXH9 659 aaKnown RBP19.4■□□□□ 0.7
VRK3-225ENST00000601912 SNTG2Q9NY99 539 aa19.4■□□□□ 0.7
VRK3-225ENST00000601912 ARHGAP20Q9P2F6 1191 aa19.4■□□□□ 0.7
VRK3-225ENST00000601912 AJAP1Q9UKB5 411 aaPredicted RBP19.4■□□□□ 0.7
VRK3-225ENST00000601912 PPP2R2CQ9Y2T4 447 aa19.4■□□□□ 0.7
VRK3-225ENST00000601912 SQORQ9Y6N5 450 aa19.4■□□□□ 0.7
VRK3-225ENST00000601912 CEP350Q5VT06 3117 aa19.4■□□□□ 0.7
VRK3-225ENST00000601912 SSU72P8A0A1W2PR75 194 aa19.4■□□□□ 0.7
VRK3-225ENST00000601912 NDUFA10O95299 355 aa19.4■□□□□ 0.7
VRK3-225ENST00000601912 VNN1O95497 513 aa19.4■□□□□ 0.7
VRK3-225ENST00000601912 FBXO47Q5MNV8 452 aa19.4■□□□□ 0.7
VRK3-225ENST00000601912 JADE1Q6IE81 842 aa19.4■□□□□ 0.7
VRK3-225ENST00000601912 EFCAB13Q8IY85 973 aa19.4■□□□□ 0.7
VRK3-225ENST00000601912 PI4K2AQ9BTU6 479 aa19.4■□□□□ 0.7
VRK3-225ENST00000601912 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.4■□□□□ 0.74e-6■■■■■ 48.8
VRK3-225ENST00000601912 C2CD2Q9Y426 696 aa19.4■□□□□ 0.7
VRK3-225ENST00000601912 CLSTN1O94985 981 aa19.39■□□□□ 0.69
VRK3-225ENST00000601912 TFRCP02786 760 aaKnown RBP19.39■□□□□ 0.69
VRK3-225ENST00000601912 CKBP12277 381 aa19.39■□□□□ 0.69
VRK3-225ENST00000601912 ZSCAN20P17040 1043 aaPredicted RBP19.39■□□□□ 0.69
VRK3-225ENST00000601912 CTCFP49711 727 aaPredicted RBP19.39■□□□□ 0.69
VRK3-225ENST00000601912 CDK7P50613 346 aa19.39■□□□□ 0.69
VRK3-225ENST00000601912 LBX1P52954 281 aa19.39■□□□□ 0.69
VRK3-225ENST00000601912 GCNT1Q02742 428 aa19.39■□□□□ 0.69
VRK3-225ENST00000601912 PAK2Q13177 524 aa19.39■□□□□ 0.69
VRK3-225ENST00000601912 MAPK8IP2Q13387 824 aaPredicted RBP19.39■□□□□ 0.69
VRK3-225ENST00000601912 TMEM132DQ14C87 1099 aa19.39■□□□□ 0.69
VRK3-225ENST00000601912 UBXN11Q5T124 520 aa19.39■□□□□ 0.69
VRK3-225ENST00000601912 ZNF618Q5T7W0 954 aa19.39■□□□□ 0.69
VRK3-225ENST00000601912 HELQQ8TDG4 1101 aa19.39■□□□□ 0.69
VRK3-225ENST00000601912 ZNF333Q96JL9 665 aa19.39■□□□□ 0.69
VRK3-225ENST00000601912 DESI2Q9BSY9 194 aa19.39■□□□□ 0.69
VRK3-225ENST00000601912 ADGRG1Q9Y653 693 aa19.39■□□□□ 0.69
VRK3-225ENST00000601912 AKR1B10O60218 316 aa19.38■□□□□ 0.69
VRK3-225ENST00000601912 OFD1O75665 1012 aa19.38■□□□□ 0.69
VRK3-225ENST00000601912 GFPT2O94808 682 aa19.38■□□□□ 0.69
VRK3-225ENST00000601912 PLEKP08567 350 aaPredicted RBP19.38■□□□□ 0.69
VRK3-225ENST00000601912 NFICP08651 508 aa19.38■□□□□ 0.69
VRK3-225ENST00000601912 GHRP10912 638 aa19.38■□□□□ 0.69
VRK3-225ENST00000601912 EIF4A3P38919 411 aaKnown RBP19.38■□□□□ 0.69
VRK3-225ENST00000601912 KRT83P78385 493 aa19.38■□□□□ 0.69
VRK3-225ENST00000601912 SGSM1Q2NKQ1 1148 aa19.38■□□□□ 0.69
VRK3-225ENST00000601912 HGSNATQ68CP4 663 aa19.38■□□□□ 0.69
VRK3-225ENST00000601912 IRF2BP2Q7Z5L9 587 aa19.38■□□□□ 0.69
VRK3-225ENST00000601912 HACE1Q8IYU2 909 aa19.38■□□□□ 0.69
VRK3-225ENST00000601912 CAGE1Q8TC20 777 aa19.38■□□□□ 0.69
VRK3-225ENST00000601912 TATDN2Q93075 761 aa19.38■□□□□ 0.69
VRK3-225ENST00000601912 NXF3Q9H4D5 531 aaKnown RBP19.38■□□□□ 0.69
VRK3-225ENST00000601912 DERAQ9Y315 318 aa19.38■□□□□ 0.69
VRK3-225ENST00000601912 R3HCC1Q9Y3T6 440 aaKnown RBP19.38■□□□□ 0.69
VRK3-225ENST00000601912 GOLGA6L9A6NEM1 432 aa19.37■□□□□ 0.69
VRK3-225ENST00000601912 EIF3CLB5ME19 914 aaKnown RBP19.37■□□□□ 0.69
VRK3-225ENST00000601912 MEFVO15553 781 aaPredicted RBP19.37■□□□□ 0.69
VRK3-225ENST00000601912 SGPL1O95470 568 aa19.37■□□□□ 0.69
VRK3-225ENST00000601912 PRKCIP41743 596 aa19.37■□□□□ 0.69
VRK3-225ENST00000601912 SPA17Q15506 151 aa19.37■□□□□ 0.69
VRK3-225ENST00000601912 GPIHBP1Q8IV16 184 aa19.37■□□□□ 0.69
VRK3-225ENST00000601912 U2AF1L4Q8WU68 220 aaKnown RBP19.37■□□□□ 0.69
VRK3-225ENST00000601912 SNX27Q96L92 541 aa19.37■□□□□ 0.69
VRK3-225ENST00000601912 TSPAN18Q96SJ8 248 aa19.37■□□□□ 0.69
VRK3-225ENST00000601912 EIF3CQ99613 913 aaKnown RBP19.37■□□□□ 0.69
VRK3-225ENST00000601912 APOL6Q9BWW8 343 aa19.37■□□□□ 0.69
VRK3-225ENST00000601912 GPR88Q9GZN0 384 aa19.37■□□□□ 0.69
VRK3-225ENST00000601912 CRISPLD2Q9H0B8 497 aa19.37■□□□□ 0.69
VRK3-225ENST00000601912 AGO3Q9H9G7 860 aaKnown RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms