RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 LRRC53A6NM62 1247 aa12.63□□□□□ -0.39
VRK3-223ENST00000601341 B4GALT5O43286 388 aa12.63□□□□□ -0.39
VRK3-223ENST00000601341 DARSP14868 501 aaKnown RBP12.63□□□□□ -0.39
VRK3-223ENST00000601341 PROZP22891 400 aa12.63□□□□□ -0.39
VRK3-223ENST00000601341 EIF4BP23588 611 aaKnown RBP12.63□□□□□ -0.39
VRK3-223ENST00000601341 EIF4A3P38919 411 aaKnown RBP12.63□□□□□ -0.39
VRK3-223ENST00000601341 VAMP7P51809 220 aa12.63□□□□□ -0.39
VRK3-223ENST00000601341 CRYBB1P53674 252 aaPredicted RBP12.63□□□□□ -0.39
VRK3-223ENST00000601341 MCCD1P59942 119 aaPredicted RBP12.63□□□□□ -0.39
VRK3-223ENST00000601341 ENPEPQ07075 957 aa12.63□□□□□ -0.39
VRK3-223ENST00000601341 MTFR1Q15390 333 aa12.63□□□□□ -0.39
VRK3-223ENST00000601341 PTGISQ16647 500 aa12.63□□□□□ -0.39
VRK3-223ENST00000601341 AMHR2Q16671 573 aa12.63□□□□□ -0.39
VRK3-223ENST00000601341 RRAGAQ7L523 313 aa12.63□□□□□ -0.39
VRK3-223ENST00000601341 RPAINQ86UA6 219 aa12.63□□□□□ -0.39
VRK3-223ENST00000601341 MFSD14AQ96MC6 490 aa12.63□□□□□ -0.39
VRK3-223ENST00000601341 DEFB118Q96PH6 123 aa12.63□□□□□ -0.39
VRK3-223ENST00000601341 HAPLN2Q9GZV7 340 aa12.63□□□□□ -0.39
VRK3-223ENST00000601341 PTPRHQ9HD43 1115 aa12.63□□□□□ -0.39
VRK3-223ENST00000601341 STARD7Q9NQZ5 370 aa12.63□□□□□ -0.39
VRK3-223ENST00000601341 PHF24Q9UPV7 400 aa12.63□□□□□ -0.39
VRK3-223ENST00000601341 BZW2Q9Y6E2 419 aaKnown RBP12.63□□□□□ -0.39
VRK3-223ENST00000601341 A0A1W2PQ45 241 aaPredicted RBP12.62□□□□□ -0.39
VRK3-223ENST00000601341 A0A1W2PQY0 241 aa12.62□□□□□ -0.39
VRK3-223ENST00000601341 BTNL10A8MVZ5 291 aa12.62□□□□□ -0.39
VRK3-223ENST00000601341 M0QZ92 97 aa12.62□□□□□ -0.39
VRK3-223ENST00000601341 DNM1LO00429 736 aa12.62□□□□□ -0.39
VRK3-223ENST00000601341 OGTO15294 1046 aa12.62□□□□□ -0.39
VRK3-223ENST00000601341 ADRB2P07550 413 aa12.62□□□□□ -0.39
VRK3-223ENST00000601341 RHOXF2BP0C7M4 288 aa12.62□□□□□ -0.39
VRK3-223ENST00000601341 AARSP49588 968 aaKnown RBP eCLIP12.62□□□□□ -0.39
VRK3-223ENST00000601341 MRPS6P82932 125 aaKnown RBP12.62□□□□□ -0.39
VRK3-223ENST00000601341 KCNMA1Q12791 1236 aa12.62□□□□□ -0.39
VRK3-223ENST00000601341 CASP8Q14790 479 aa12.62□□□□□ -0.39
VRK3-223ENST00000601341 PKN2Q16513 984 aaKnown RBP12.62□□□□□ -0.39
VRK3-223ENST00000601341 ZNF568Q3ZCX4 644 aa12.62□□□□□ -0.39
VRK3-223ENST00000601341 HGSNATQ68CP4 663 aa12.62□□□□□ -0.39
VRK3-223ENST00000601341 FBXO46Q6PJ61 603 aaPredicted RBP12.62□□□□□ -0.39
VRK3-223ENST00000601341 FAM71BQ8TC56 605 aa12.62□□□□□ -0.39
VRK3-223ENST00000601341 TMC2Q8TDI7 906 aa12.62□□□□□ -0.39
VRK3-223ENST00000601341 OSMRQ99650 979 aa12.62□□□□□ -0.39
VRK3-223ENST00000601341 RHOXF2Q9BQY4 288 aa12.62□□□□□ -0.39
VRK3-223ENST00000601341 SEZ6LQ9BYH1 1024 aa12.62□□□□□ -0.39
VRK3-223ENST00000601341 CDHR5Q9HBB8 845 aa12.62□□□□□ -0.39
VRK3-223ENST00000601341 ST7Q9NRC1 585 aa12.62□□□□□ -0.39
VRK3-223ENST00000601341 NOD1Q9Y239 953 aa12.62□□□□□ -0.39
VRK3-223ENST00000601341 DAAM1Q9Y4D1 1078 aa12.62□□□□□ -0.39
VRK3-223ENST00000601341 HYOU1Q9Y4L1 999 aa12.62□□□□□ -0.39
VRK3-223ENST00000601341 A0A0U1RQG5 324 aaPredicted RBP12.61□□□□□ -0.39
VRK3-223ENST00000601341 GTPBP10A4D1E9 387 aaKnown RBP12.61□□□□□ -0.39
VRK3-223ENST00000601341 ABLIM1O14639 778 aa12.61□□□□□ -0.39
VRK3-223ENST00000601341 ENC1O14682 589 aa12.61□□□□□ -0.39
VRK3-223ENST00000601341 EPHB6O15197 1021 aa12.61□□□□□ -0.39
VRK3-223ENST00000601341 TSPAN1O60635 241 aa12.61□□□□□ -0.39
VRK3-223ENST00000601341 MYCP01106 439 aaPredicted RBP12.61□□□□□ -0.39
VRK3-223ENST00000601341 HARSP12081 509 aaKnown RBP12.61□□□□□ -0.39
VRK3-223ENST00000601341 ARF4P18085 180 aaPredicted RBP12.61□□□□□ -0.39
VRK3-223ENST00000601341 MAGEA1P43355 309 aa12.61□□□□□ -0.39
VRK3-223ENST00000601341 CTCFP49711 727 aaPredicted RBP12.61□□□□□ -0.39
VRK3-223ENST00000601341 CYP24A1Q07973 514 aa12.61□□□□□ -0.39
VRK3-223ENST00000601341 SNX17Q15036 470 aa12.61□□□□□ -0.39
VRK3-223ENST00000601341 GLE1Q53GS7 698 aaKnown RBP12.61□□□□□ -0.39
VRK3-223ENST00000601341 SFMBT2Q5VUG0 894 aa12.61□□□□□ -0.39
VRK3-223ENST00000601341 CATSPER4Q7RTX7 472 aa12.61□□□□□ -0.39
VRK3-223ENST00000601341 ZBTB33Q86T24 672 aa12.61□□□□□ -0.39
VRK3-223ENST00000601341 PARD3BQ8TEW8 1205 aa12.61□□□□□ -0.39
VRK3-223ENST00000601341 NOX5Q96PH1 765 aa12.61□□□□□ -0.39
VRK3-223ENST00000601341 MMS19Q96T76 1030 aa12.61□□□□□ -0.39
VRK3-223ENST00000601341 CELF4Q9BZC1 486 aaKnown RBP12.61□□□□□ -0.39
VRK3-223ENST00000601341 OGDHLQ9ULD0 1010 aa12.61□□□□□ -0.39
VRK3-223ENST00000601341 A0A1B0GUA9 196 aa12.61□□□□□ -0.39
VRK3-223ENST00000601341 N4BP1O75113 896 aaKnown RBP12.61□□□□□ -0.39
VRK3-223ENST00000601341 NOL4O94818 638 aa12.61□□□□□ -0.39
VRK3-223ENST00000601341 TRIM49P0CI25 452 aa12.61□□□□□ -0.39
VRK3-223ENST00000601341 TRIM49CP0CI26 452 aa12.61□□□□□ -0.39
VRK3-223ENST00000601341 MCF2P10911 925 aa12.61□□□□□ -0.39
VRK3-223ENST00000601341 FMO5P49326 533 aa12.61□□□□□ -0.39
VRK3-223ENST00000601341 ACOT2P49753 483 aa12.61□□□□□ -0.39
VRK3-223ENST00000601341 LBX1P52954 281 aa12.61□□□□□ -0.39
VRK3-223ENST00000601341 CYP27A1Q02318 531 aa12.61□□□□□ -0.39
VRK3-223ENST00000601341 CETN1Q12798 172 aa12.61□□□□□ -0.39
VRK3-223ENST00000601341 PTK7Q13308 1070 aa12.61□□□□□ -0.39
VRK3-223ENST00000601341 EXOC3L4Q17RC7 722 aa12.61□□□□□ -0.39
VRK3-223ENST00000601341 HSP90B2PQ58FF3 399 aa12.61□□□□□ -0.39
VRK3-223ENST00000601341 EEF1DP3Q658K8 133 aa12.61□□□□□ -0.39
VRK3-223ENST00000601341 CRELD2Q6UXH1 353 aaPredicted RBP12.61□□□□□ -0.39
VRK3-223ENST00000601341 GBP6Q6ZN66 633 aa12.61□□□□□ -0.39
VRK3-223ENST00000601341 APBB1IPQ7Z5R6 666 aaPredicted RBP12.61□□□□□ -0.39
VRK3-223ENST00000601341 CREG2Q8IUH2 290 aa12.61□□□□□ -0.39
VRK3-223ENST00000601341 SLC43A3Q8NBI5 491 aa12.61□□□□□ -0.39
VRK3-223ENST00000601341 CCDC127Q96BQ5 260 aa12.61□□□□□ -0.39
VRK3-223ENST00000601341 PKNOX2Q96KN3 472 aa12.61□□□□□ -0.39
VRK3-223ENST00000601341 CALCOCO1Q9P1Z2 691 aa12.61□□□□□ -0.39
VRK3-223ENST00000601341 SIP14410 1827 aa12.61□□□□□ -0.39
VRK3-223ENST00000601341 MACROD2A1Z1Q3 448 aa12.6□□□□□ -0.39
VRK3-223ENST00000601341 ARVCFO00192 962 aa12.6□□□□□ -0.39
VRK3-223ENST00000601341 CES2O00748 559 aa12.6□□□□□ -0.39
VRK3-223ENST00000601341 P4HA2O15460 535 aa12.6□□□□□ -0.39
VRK3-223ENST00000601341 FAM189A1O60320 539 aa12.6□□□□□ -0.39
VRK3-223ENST00000601341 TNFRSF8P28908 595 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms