RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 IGFBP6P24592 240 aaPredicted RBP18.64■□□□□ 0.57
SCAF1-204ENST00000601038 OR1D2P34982 312 aa18.64■□□□□ 0.57
SCAF1-204ENST00000601038 ZNF568Q3ZCX4 644 aa18.64■□□□□ 0.57
SCAF1-204ENST00000601038 RTL10Q7L3V2 364 aa18.64■□□□□ 0.57
SCAF1-204ENST00000601038 GRASPQ7Z6J2 395 aaPredicted RBP18.64■□□□□ 0.57
SCAF1-204ENST00000601038 KCTD17Q8N5Z5 321 aa18.64■□□□□ 0.57
SCAF1-204ENST00000601038 CEP120Q8N960 986 aa18.64■□□□□ 0.57
SCAF1-204ENST00000601038 DDX27Q96GQ7 796 aaKnown RBP18.64■□□□□ 0.57
SCAF1-204ENST00000601038 TARS2Q9BW92 718 aaKnown RBP18.64■□□□□ 0.57
SCAF1-204ENST00000601038 SLC38A7Q9NVC3 462 aa18.64■□□□□ 0.57
SCAF1-204ENST00000601038 MTRRQ9UBK8 725 aa18.64■□□□□ 0.57
SCAF1-204ENST00000601038 KCNG1Q9UIX4 513 aa18.64■□□□□ 0.57
SCAF1-204ENST00000601038 XYLBO75191 536 aa18.63■□□□□ 0.57
SCAF1-204ENST00000601038 POU2F2P09086 479 aa18.63■□□□□ 0.57
SCAF1-204ENST00000601038 MCF2P10911 925 aa18.63■□□□□ 0.57
SCAF1-204ENST00000601038 PROZP22891 400 aa18.63■□□□□ 0.57
SCAF1-204ENST00000601038 GUCY2CP25092 1073 aa18.63■□□□□ 0.57
SCAF1-204ENST00000601038 OSTNP61366 133 aa18.63■□□□□ 0.57
SCAF1-204ENST00000601038 ATP2C1P98194 919 aaPredicted RBP18.63■□□□□ 0.57
SCAF1-204ENST00000601038 HTR4Q13639 388 aa18.63■□□□□ 0.57
SCAF1-204ENST00000601038 HYIQ5T013 277 aa18.63■□□□□ 0.57
SCAF1-204ENST00000601038 AXDND1Q5T1B0 1012 aaPredicted RBP18.63■□□□□ 0.57
SCAF1-204ENST00000601038 ANKS3Q6ZW76 656 aa18.63■□□□□ 0.57
SCAF1-204ENST00000601038 ACAP3Q96P50 834 aa18.63■□□□□ 0.57
SCAF1-204ENST00000601038 TCHPQ9BT92 498 aa18.63■□□□□ 0.57
SCAF1-204ENST00000601038 GOLGA2P5Q9HBQ8 144 aa18.63■□□□□ 0.57
SCAF1-204ENST00000601038 BACE2Q9Y5Z0 518 aa18.63■□□□□ 0.57
SCAF1-204ENST00000601038 KRBA1A5PL33 1030 aa18.62■□□□□ 0.57
SCAF1-204ENST00000601038 SFI1A8K8P3 1242 aa18.62■□□□□ 0.57
SCAF1-204ENST00000601038 ABLIM1O14639 778 aa18.62■□□□□ 0.57
SCAF1-204ENST00000601038 SLC16A4O15374 487 aa18.62■□□□□ 0.57
SCAF1-204ENST00000601038 CCL16O15467 120 aa18.62■□□□□ 0.57
SCAF1-204ENST00000601038 TKTP29401 623 aaKnown RBP18.62■□□□□ 0.57
SCAF1-204ENST00000601038 NBL1P41271 181 aa18.62■□□□□ 0.57
SCAF1-204ENST00000601038 SOX4Q06945 474 aaPredicted RBP18.62■□□□□ 0.57
SCAF1-204ENST00000601038 MPZL3Q6UWV2 235 aa18.62■□□□□ 0.57
SCAF1-204ENST00000601038 CCDC105Q8IYK2 499 aa18.62■□□□□ 0.57
SCAF1-204ENST00000601038 C3orf58Q8NDZ4 430 aa18.62■□□□□ 0.57
SCAF1-204ENST00000601038 SLC7A14Q8TBB6 771 aa18.62■□□□□ 0.57
SCAF1-204ENST00000601038 SPIRE2Q8WWL2 714 aa18.62■□□□□ 0.57
SCAF1-204ENST00000601038 TMX3Q96JJ7 454 aa18.62■□□□□ 0.57
SCAF1-204ENST00000601038 CDH7Q9ULB5 785 aa18.62■□□□□ 0.57
SCAF1-204ENST00000601038 CDY1Q9Y6F8 540 aa18.62■□□□□ 0.57
SCAF1-204ENST00000601038 NUMBLQ9Y6R0 609 aa18.62■□□□□ 0.57
SCAF1-204ENST00000601038 STK25O00506 426 aa18.61■□□□□ 0.57
SCAF1-204ENST00000601038 CENPBP07199 599 aaPredicted RBP18.61■□□□□ 0.57
SCAF1-204ENST00000601038 KCNE1P15382 129 aa18.61■□□□□ 0.57
SCAF1-204ENST00000601038 BRCC3P46736 316 aa18.61■□□□□ 0.57
SCAF1-204ENST00000601038 NTHL1P78549 312 aa18.61■□□□□ 0.57
SCAF1-204ENST00000601038 STRN3Q13033 797 aa18.61■□□□□ 0.57
SCAF1-204ENST00000601038 ZRSR1Q15695 479 aaKnown RBP18.61■□□□□ 0.57
SCAF1-204ENST00000601038 ARL6IP4Q66PJ3 421 aaKnown RBP18.61■□□□□ 0.57
SCAF1-204ENST00000601038 RSPO2Q6UXX9 243 aaPredicted RBP18.61■□□□□ 0.57
SCAF1-204ENST00000601038 SYT2Q8N9I0 419 aaPredicted RBP18.61■□□□□ 0.57
SCAF1-204ENST00000601038 SNX27Q96L92 541 aa18.61■□□□□ 0.57
SCAF1-204ENST00000601038 ZMAT2Q96NC0 199 aaKnown RBP18.61■□□□□ 0.57
SCAF1-204ENST00000601038 PNMA5Q96PV4 448 aa18.61■□□□□ 0.57
SCAF1-204ENST00000601038 SLC2A4RGQ9NR83 387 aa18.61■□□□□ 0.57
SCAF1-204ENST00000601038 KCND2Q9NZV8 630 aa18.61■□□□□ 0.57
SCAF1-204ENST00000601038 POLIQ9UNA4 740 aa18.61■□□□□ 0.57
SCAF1-204ENST00000601038 H3BQV1 296 aa18.6■□□□□ 0.57
SCAF1-204ENST00000601038 I3L4J1 428 aa18.6■□□□□ 0.57
SCAF1-204ENST00000601038 PODXLO00592 558 aa18.6■□□□□ 0.57
SCAF1-204ENST00000601038 TOM1L1O75674 476 aa18.6■□□□□ 0.57
SCAF1-204ENST00000601038 PLS3P13797 630 aa18.6■□□□□ 0.57
SCAF1-204ENST00000601038 RPL9P32969 192 aaKnown RBP18.6■□□□□ 0.57
SCAF1-204ENST00000601038 SMTNP53814 917 aa18.6■□□□□ 0.57
SCAF1-204ENST00000601038 DTWD2Q8NBA8 298 aa18.6■□□□□ 0.57
SCAF1-204ENST00000601038 TMEM161BQ8NDZ6 487 aa18.6■□□□□ 0.57
SCAF1-204ENST00000601038 GPR152Q8TDT2 470 aa18.6■□□□□ 0.57
SCAF1-204ENST00000601038 FGF13Q92913 245 aa18.6■□□□□ 0.57
SCAF1-204ENST00000601038 CNTN3Q9P232 1028 aa18.6■□□□□ 0.57
SCAF1-204ENST00000601038 CA14Q9ULX7 337 aa18.6■□□□□ 0.57
SCAF1-204ENST00000601038 VWA3AA6NCI4 1184 aa18.59■□□□□ 0.57
SCAF1-204ENST00000601038 GJB2P29033 226 aa18.59■□□□□ 0.57
SCAF1-204ENST00000601038 SLC12A3P55017 1021 aa18.59■□□□□ 0.57
SCAF1-204ENST00000601038 RAD51AP2Q09MP3 1159 aa18.59■□□□□ 0.57
SCAF1-204ENST00000601038 SLC8B1Q6J4K2 584 aa18.59■□□□□ 0.57
SCAF1-204ENST00000601038 PHLDB3Q6NSJ2 640 aa18.59■□□□□ 0.57
SCAF1-204ENST00000601038 PARM1Q6UWI2 310 aa18.59■□□□□ 0.57
SCAF1-204ENST00000601038 ZNF461Q8TAF7 563 aa18.59■□□□□ 0.57
SCAF1-204ENST00000601038 FGF14Q92915 247 aa18.59■□□□□ 0.57
SCAF1-204ENST00000601038 ZBTB45Q96K62 511 aaPredicted RBP18.59■□□□□ 0.57
SCAF1-204ENST00000601038 PLIN2Q99541 437 aa18.59■□□□□ 0.57
SCAF1-204ENST00000601038 RPP25Q9BUL9 199 aaKnown RBP18.59■□□□□ 0.57
SCAF1-204ENST00000601038 TBC1D17Q9HA65 648 aa18.59■□□□□ 0.57
SCAF1-204ENST00000601038 DNMT3BQ9UBC3 853 aaKnown RBP18.59■□□□□ 0.57
SCAF1-204ENST00000601038 KCNH3Q9ULD8 1083 aa18.59■□□□□ 0.57
SCAF1-204ENST00000601038 CITO14578 2027 aa18.58■□□□□ 0.56
SCAF1-204ENST00000601038 SYN3O14994 580 aa18.58■□□□□ 0.56
SCAF1-204ENST00000601038 PLA2G4BP0C869 781 aa18.58■□□□□ 0.56
SCAF1-204ENST00000601038 MAPTP10636 758 aaKnown RBP18.58■□□□□ 0.56
SCAF1-204ENST00000601038 RFX1P22670 979 aa18.58■□□□□ 0.56
SCAF1-204ENST00000601038 NOLC1Q14978 699 aaKnown RBP eCLIP18.58■□□□□ 0.56
SCAF1-204ENST00000601038 ANGPT1Q15389 498 aa18.58■□□□□ 0.56
SCAF1-204ENST00000601038 PABPC1LQ4VXU2 614 aaKnown RBP18.58■□□□□ 0.56
SCAF1-204ENST00000601038 VARS2Q5ST30 1063 aaKnown RBP18.58■□□□□ 0.56
SCAF1-204ENST00000601038 ZPBP2Q6X784 338 aa18.58■□□□□ 0.56
SCAF1-204ENST00000601038 MTSS1LQ765P7 747 aa18.58■□□□□ 0.56
SCAF1-204ENST00000601038 ST13P5Q8NFI4 369 aaPredicted RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms