RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 ACTN4O43707 911 aaKnown RBP17.66■□□□□ 0.42
LSM4-206ENST00000600289 SOD2P04179 222 aa17.66■□□□□ 0.42
LSM4-206ENST00000600289 SLFN14P0C7P3 912 aa17.66■□□□□ 0.42
LSM4-206ENST00000600289 PFKFB1P16118 471 aa17.66■□□□□ 0.42
LSM4-206ENST00000600289 LTBRP36941 435 aa17.66■□□□□ 0.42
LSM4-206ENST00000600289 NRIP1P48552 1158 aa17.66■□□□□ 0.42
LSM4-206ENST00000600289 EHHADHQ08426 723 aa17.66■□□□□ 0.42
LSM4-206ENST00000600289 COASYQ13057 564 aa17.66■□□□□ 0.42
LSM4-206ENST00000600289 HSP90AA2PQ14568 343 aaPredicted RBP17.66■□□□□ 0.42
LSM4-206ENST00000600289 L1TD1Q5T7N2 865 aaKnown RBP17.66■□□□□ 0.42
LSM4-206ENST00000600289 TMEM184AQ6ZMB5 413 aa17.66■□□□□ 0.42
LSM4-206ENST00000600289 ERMP1Q7Z2K6 904 aa17.66■□□□□ 0.42
LSM4-206ENST00000600289 GPR65Q8IYL9 337 aa17.66■□□□□ 0.42
LSM4-206ENST00000600289 STAMQ92783 540 aa17.66■□□□□ 0.42
LSM4-206ENST00000600289 UROC1Q96N76 676 aa17.66■□□□□ 0.42
LSM4-206ENST00000600289 TSPAN18Q96SJ8 248 aa17.66■□□□□ 0.42
LSM4-206ENST00000600289 TLE6Q9H808 572 aa17.66■□□□□ 0.42
LSM4-206ENST00000600289 PLEKHA5Q9HAU0 1116 aa17.66■□□□□ 0.42
LSM4-206ENST00000600289 SLC38A7Q9NVC3 462 aa17.66■□□□□ 0.42
LSM4-206ENST00000600289 CLDND1Q9NY35 253 aa17.66■□□□□ 0.42
LSM4-206ENST00000600289 ADAM28Q9UKQ2 775 aa17.66■□□□□ 0.42
LSM4-206ENST00000600289 CIZ1Q9ULV3 898 aaPredicted RBP17.66■□□□□ 0.42
LSM4-206ENST00000600289 PRG3Q9Y2Y8 225 aaPredicted RBP17.66■□□□□ 0.42
LSM4-206ENST00000600289 PCDHB13Q9Y5F0 798 aa17.66■□□□□ 0.42
LSM4-206ENST00000600289 SMIM28A0A1B0GU29 152 aa17.65■□□□□ 0.42
LSM4-206ENST00000600289 OGTO15294 1046 aa17.65■□□□□ 0.42
LSM4-206ENST00000600289 MEFVO15553 781 aaPredicted RBP17.65■□□□□ 0.42
LSM4-206ENST00000600289 ADRB2P07550 413 aa17.65■□□□□ 0.42
LSM4-206ENST00000600289 CLTAP09496 248 aa17.65■□□□□ 0.42
LSM4-206ENST00000600289 GTF2F1P35269 517 aaKnown RBP eCLIP17.65■□□□□ 0.42
LSM4-206ENST00000600289 POU5F1Q01860 360 aaKnown RBP17.65■□□□□ 0.42
LSM4-206ENST00000600289 SLFN12LQ6IEE8 588 aa17.65■□□□□ 0.42
LSM4-206ENST00000600289 UNC13DQ70J99 1090 aa17.65■□□□□ 0.42
LSM4-206ENST00000600289 EDAQ92838 391 aa17.65■□□□□ 0.42
LSM4-206ENST00000600289 ACCSQ96QU6 501 aa17.65■□□□□ 0.42
LSM4-206ENST00000600289 EXOC7Q9UPT5 735 aa17.65■□□□□ 0.42
LSM4-206ENST00000600289 SSX2IPQ9Y2D8 614 aa17.65■□□□□ 0.42
LSM4-206ENST00000600289 DMXL1Q9Y485 3027 aa17.65■□□□□ 0.42
LSM4-206ENST00000600289 RIF1Q5UIP0 2472 aaKnown RBP17.64■□□□□ 0.42
LSM4-206ENST00000600289 DNAH14Q0VDD8 3507 aa17.64■□□□□ 0.41
LSM4-206ENST00000600289 A0A1B0GVL5 298 aa17.64■□□□□ 0.41
LSM4-206ENST00000600289 PVALEFA0A1B0GWK0 134 aa17.64■□□□□ 0.41
LSM4-206ENST00000600289 LILRB3O75022 631 aa17.64■□□□□ 0.41
LSM4-206ENST00000600289 TBX10O75333 385 aa17.64■□□□□ 0.41
LSM4-206ENST00000600289 CSPG5O95196 566 aa17.64■□□□□ 0.41
LSM4-206ENST00000600289 GCNT3O95395 438 aa17.64■□□□□ 0.41
LSM4-206ENST00000600289 GLP2RO95838 553 aa17.64■□□□□ 0.41
LSM4-206ENST00000600289 MYL1P05976 194 aa17.64■□□□□ 0.41
LSM4-206ENST00000600289 HARSP12081 509 aaKnown RBP17.64■□□□□ 0.41
LSM4-206ENST00000600289 MATR3P43243 847 aaKnown RBP eCLIP17.64■□□□□ 0.41
LSM4-206ENST00000600289 CASP5P51878 434 aa17.64■□□□□ 0.41
LSM4-206ENST00000600289 OSTNP61366 133 aa17.64■□□□□ 0.41
LSM4-206ENST00000600289 ASIC1P78348 528 aa17.64■□□□□ 0.41
LSM4-206ENST00000600289 PTPN14Q15678 1187 aa17.64■□□□□ 0.41
LSM4-206ENST00000600289 SLC10A6Q3KNW5 377 aa17.64■□□□□ 0.41
LSM4-206ENST00000600289 STXBP4Q6ZWJ1 553 aa17.64■□□□□ 0.41
LSM4-206ENST00000600289 RNF135Q8IUD6 432 aa17.64■□□□□ 0.41
LSM4-206ENST00000600289 CEP57L1Q8IYX8 460 aa17.64■□□□□ 0.41
LSM4-206ENST00000600289 ZMAT2Q96NC0 199 aaKnown RBP17.64■□□□□ 0.41
LSM4-206ENST00000600289 PAAF1Q9BRP4 392 aa17.64■□□□□ 0.41
LSM4-206ENST00000600289 MSTO1Q9BUK6 570 aa17.64■□□□□ 0.41
LSM4-206ENST00000600289 CHST7Q9NS84 486 aa17.64■□□□□ 0.41
LSM4-206ENST00000600289 CPSF3Q9UKF6 684 aaKnown RBP17.64■□□□□ 0.41
LSM4-206ENST00000600289 FAM50BQ9Y247 325 aa17.64■□□□□ 0.41
LSM4-206ENST00000600289 UBE4BO95155 1302 aa17.64■□□□□ 0.41
LSM4-206ENST00000600289 TTC26A0AVF1 554 aa17.63■□□□□ 0.41
LSM4-206ENST00000600289 ANKRD63C9JTQ0 380 aa17.63■□□□□ 0.41
LSM4-206ENST00000600289 EIF3DO15371 548 aaKnown RBP eCLIP17.63■□□□□ 0.41
LSM4-206ENST00000600289 LINC01565O15544 149 aa17.63■□□□□ 0.41
LSM4-206ENST00000600289 CXCL14O95715 111 aa17.63■□□□□ 0.41
LSM4-206ENST00000600289 SRGAP2BP0DMP2 458 aa17.63■□□□□ 0.41
LSM4-206ENST00000600289 MYBP10242 640 aa17.63■□□□□ 0.41
LSM4-206ENST00000600289 GLRA4Q5JXX5 417 aa17.63■□□□□ 0.41
LSM4-206ENST00000600289 FUT10Q6P4F1 479 aa17.63■□□□□ 0.41
LSM4-206ENST00000600289 RBM23Q86U06 439 aaKnown RBP17.63■□□□□ 0.41
LSM4-206ENST00000600289 DDX27Q96GQ7 796 aaKnown RBP17.63■□□□□ 0.41
LSM4-206ENST00000600289 MSLNLQ96KJ4 702 aa17.63■□□□□ 0.41
LSM4-206ENST00000600289 IGFLR1Q9H665 355 aa17.63■□□□□ 0.41
LSM4-206ENST00000600289 TMEM206Q9H813 350 aa17.63■□□□□ 0.41
LSM4-206ENST00000600289 SERTAD1Q9UHV2 236 aa17.63■□□□□ 0.41
LSM4-206ENST00000600289 SF3B1O75533 1304 aaKnown RBP eCLIP17.63■□□□□ 0.416e-7■■■■■ 71.8
LSM4-206ENST00000600289 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.62■□□□□ 0.41
LSM4-206ENST00000600289 TMEM221A6NGB7 291 aa17.62■□□□□ 0.41
LSM4-206ENST00000600289 CASTOR2A6NHX0 329 aa17.62■□□□□ 0.41
LSM4-206ENST00000600289 F8W810 466 aa17.62■□□□□ 0.41
LSM4-206ENST00000600289 M0R296 226 aa17.62■□□□□ 0.41
LSM4-206ENST00000600289 PER2O15055 1255 aa17.62■□□□□ 0.41
LSM4-206ENST00000600289 KIF4AO95239 1232 aa17.62■□□□□ 0.41
LSM4-206ENST00000600289 C1RP00736 705 aa17.62■□□□□ 0.41
LSM4-206ENST00000600289 URODP06132 367 aa17.62■□□□□ 0.41
LSM4-206ENST00000600289 CXCL8P10145 99 aa17.62■□□□□ 0.41
LSM4-206ENST00000600289 SYKP43405 635 aa17.62■□□□□ 0.41
LSM4-206ENST00000600289 GLUD2P49448 558 aa17.62■□□□□ 0.41
LSM4-206ENST00000600289 DSG1Q02413 1049 aa17.62■□□□□ 0.41
LSM4-206ENST00000600289 PPP2R3AQ06190 1150 aa17.62■□□□□ 0.41
LSM4-206ENST00000600289 DLX2Q07687 328 aaPredicted RBP17.62■□□□□ 0.41
LSM4-206ENST00000600289 ELAVL2Q12926 359 aaKnown RBP17.62■□□□□ 0.41
LSM4-206ENST00000600289 POSTNQ15063 836 aa17.62■□□□□ 0.41
LSM4-206ENST00000600289 UPP1Q16831 310 aa17.62■□□□□ 0.41
LSM4-206ENST00000600289 SEZ6Q53EL9 994 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms