RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 LIMA1Q9UHB6 759 aaKnown RBP13.31□□□□□ -0.28
TGFB1-204ENST00000600196 ITGA11Q9UKX5 1188 aa13.31□□□□□ -0.28
TGFB1-204ENST00000600196 DAAM1Q9Y4D1 1078 aa13.31□□□□□ -0.28
TGFB1-204ENST00000600196 HES2Q9Y543 173 aa13.31□□□□□ -0.28
TGFB1-204ENST00000600196 PDE4DIPQ5VU43 2346 aa13.31□□□□□ -0.28
TGFB1-204ENST00000600196 ARHGEF37A1IGU5 675 aa13.3□□□□□ -0.28
TGFB1-204ENST00000600196 GOLGA8IPA6NC78 632 aa13.3□□□□□ -0.28
TGFB1-204ENST00000600196 GOLGA8JA6NMD2 632 aa13.3□□□□□ -0.28
TGFB1-204ENST00000600196 TMEM189-UBE2V1I3L0A0 370 aa13.3□□□□□ -0.28
TGFB1-204ENST00000600196 STAU1O95793 577 aaKnown RBP13.3□□□□□ -0.28
TGFB1-204ENST00000600196 TNNC2P02585 160 aa13.3□□□□□ -0.28
TGFB1-204ENST00000600196 HARSP12081 509 aaKnown RBP13.3□□□□□ -0.28
TGFB1-204ENST00000600196 CDK11BP21127 795 aaKnown RBP13.3□□□□□ -0.28
TGFB1-204ENST00000600196 AKAP5P24588 427 aa13.3□□□□□ -0.28
TGFB1-204ENST00000600196 ATICP31939 592 aa13.3□□□□□ -0.28
TGFB1-204ENST00000600196 PNPLA4P41247 253 aa13.3□□□□□ -0.28
TGFB1-204ENST00000600196 RAB30Q15771 203 aa13.3□□□□□ -0.28
TGFB1-204ENST00000600196 MAN2A1Q16706 1144 aa13.3□□□□□ -0.28
TGFB1-204ENST00000600196 CLLU1OSQ5K130 101 aa13.3□□□□□ -0.28
TGFB1-204ENST00000600196 GPR65Q8IYL9 337 aa13.3□□□□□ -0.28
TGFB1-204ENST00000600196 CLP1Q92989 425 aaKnown RBP13.3□□□□□ -0.28
TGFB1-204ENST00000600196 SLC35C1Q96A29 364 aa13.3□□□□□ -0.28
TGFB1-204ENST00000600196 ANKRD36BP1Q96IX9 119 aa13.3□□□□□ -0.28
TGFB1-204ENST00000600196 FAM81BQ96LP2 452 aa13.3□□□□□ -0.28
TGFB1-204ENST00000600196 FAM193BQ96PV7 902 aaPredicted RBP13.3□□□□□ -0.28
TGFB1-204ENST00000600196 ZBED2Q9BTP6 218 aa13.3□□□□□ -0.28
TGFB1-204ENST00000600196 FANCLQ9NW38 375 aa13.3□□□□□ -0.28
TGFB1-204ENST00000600196 CXXC1Q9P0U4 656 aaPredicted RBP13.3□□□□□ -0.28
TGFB1-204ENST00000600196 COQ4Q9Y3A0 265 aa13.3□□□□□ -0.28
TGFB1-204ENST00000600196 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.3□□□□□ -0.28
TGFB1-204ENST00000600196 KCNJ18B7U540 433 aa13.29□□□□□ -0.28
TGFB1-204ENST00000600196 PTGESO14684 152 aa13.29□□□□□ -0.28
TGFB1-204ENST00000600196 ALDH2P05091 517 aa13.29□□□□□ -0.28
TGFB1-204ENST00000600196 LAG3P18627 525 aa13.29□□□□□ -0.28
TGFB1-204ENST00000600196 TNNI1P19237 187 aa13.29□□□□□ -0.28
TGFB1-204ENST00000600196 MLH1P40692 756 aa13.29□□□□□ -0.28
TGFB1-204ENST00000600196 OSTNP61366 133 aa13.29□□□□□ -0.28
TGFB1-204ENST00000600196 DEFB103AP81534 67 aa13.29□□□□□ -0.28
TGFB1-204ENST00000600196 SMAD3P84022 425 aaKnown RBP13.29□□□□□ -0.28
TGFB1-204ENST00000600196 KCNJ12Q14500 433 aa13.29□□□□□ -0.28
TGFB1-204ENST00000600196 NAB2Q15742 525 aa13.29□□□□□ -0.28
TGFB1-204ENST00000600196 ZACNQ401N2 412 aa13.29□□□□□ -0.28
TGFB1-204ENST00000600196 ZBTB41Q5SVQ8 909 aa13.29□□□□□ -0.28
TGFB1-204ENST00000600196 KRT39Q6A163 491 aa13.29□□□□□ -0.28
TGFB1-204ENST00000600196 DCLRE1AQ6PJP8 1040 aa13.29□□□□□ -0.28
TGFB1-204ENST00000600196 C15orf39Q6ZRI6 1047 aa13.29□□□□□ -0.28
TGFB1-204ENST00000600196 TMEM192Q8IY95 271 aa13.29□□□□□ -0.28
TGFB1-204ENST00000600196 AOPEPQ8N6M6 819 aa13.29□□□□□ -0.28
TGFB1-204ENST00000600196 LRRC52Q8N7C0 313 aa13.29□□□□□ -0.28
TGFB1-204ENST00000600196 RDH13Q8NBN7 331 aa13.29□□□□□ -0.28
TGFB1-204ENST00000600196 SPATA18Q8TC71 538 aa13.29□□□□□ -0.28
TGFB1-204ENST00000600196 KIF12Q96FN5 646 aa13.29□□□□□ -0.28
TGFB1-204ENST00000600196 CNOT6LQ96LI5 555 aaKnown RBP13.29□□□□□ -0.28
TGFB1-204ENST00000600196 YME1L1Q96TA2 773 aa13.29□□□□□ -0.28
TGFB1-204ENST00000600196 PLVAPQ9BX97 442 aa13.29□□□□□ -0.28
TGFB1-204ENST00000600196 VRTNQ9H8Y1 702 aa13.29□□□□□ -0.28
TGFB1-204ENST00000600196 TMEM8AQ9HCN3 771 aa13.29□□□□□ -0.28
TGFB1-204ENST00000600196 PDE11AQ9HCR9 933 aa13.29□□□□□ -0.28
TGFB1-204ENST00000600196 TBC1D13Q9NVG8 400 aa13.29□□□□□ -0.28
TGFB1-204ENST00000600196 R3HCC1Q9Y3T6 440 aaKnown RBP13.29□□□□□ -0.28
TGFB1-204ENST00000600196 CEP290O15078 2479 aa13.28□□□□□ -0.28
TGFB1-204ENST00000600196 ANO9A1A5B4 782 aa13.28□□□□□ -0.28
TGFB1-204ENST00000600196 TBKBP1A7MCY6 615 aa13.28□□□□□ -0.28
TGFB1-204ENST00000600196 TLL1O43897 1013 aa13.28□□□□□ -0.28
TGFB1-204ENST00000600196 ZC3H11AO75152 810 aaKnown RBP eCLIP13.28□□□□□ -0.28
TGFB1-204ENST00000600196 AFPP02771 609 aaKnown RBP13.28□□□□□ -0.28
TGFB1-204ENST00000600196 C4BPAP04003 597 aaKnown RBP13.28□□□□□ -0.28
TGFB1-204ENST00000600196 RB1P06400 928 aa13.28□□□□□ -0.28
TGFB1-204ENST00000600196 TMEM191BP0C7N4 346 aa13.28□□□□□ -0.28
TGFB1-204ENST00000600196 PPM1AP35813 382 aa13.28□□□□□ -0.28
TGFB1-204ENST00000600196 MTIF2P46199 727 aaKnown RBP13.28□□□□□ -0.28
TGFB1-204ENST00000600196 RBP5P82980 135 aa13.28□□□□□ -0.28
TGFB1-204ENST00000600196 RNASELQ05823 741 aaKnown RBP13.28□□□□□ -0.28
TGFB1-204ENST00000600196 ELAVL2Q12926 359 aaKnown RBP13.28□□□□□ -0.28
TGFB1-204ENST00000600196 BTG3Q14201 252 aaPredicted RBP13.28□□□□□ -0.28
TGFB1-204ENST00000600196 LRIT3Q3SXY7 679 aa13.28□□□□□ -0.28
TGFB1-204ENST00000600196 FILIP1LQ4L180 1135 aa13.28□□□□□ -0.28
TGFB1-204ENST00000600196 C9orf50Q5SZB4 431 aa13.28□□□□□ -0.28
TGFB1-204ENST00000600196 PRPF38BQ5VTL8 546 aaKnown RBP13.28□□□□□ -0.28
TGFB1-204ENST00000600196 JADE1Q6IE81 842 aa13.28□□□□□ -0.28
TGFB1-204ENST00000600196 FIBCD1Q8N539 461 aa13.28□□□□□ -0.28
TGFB1-204ENST00000600196 RNF169Q8NCN4 708 aa13.28□□□□□ -0.28
TGFB1-204ENST00000600196 HELQQ8TDG4 1101 aa13.28□□□□□ -0.28
TGFB1-204ENST00000600196 LPPQ93052 612 aa13.28□□□□□ -0.28
TGFB1-204ENST00000600196 TUBGCP2Q9BSJ2 902 aa13.28□□□□□ -0.28
TGFB1-204ENST00000600196 COLEC11Q9BWP8 271 aa13.28□□□□□ -0.28
TGFB1-204ENST00000600196 APOL6Q9BWW8 343 aa13.28□□□□□ -0.28
TGFB1-204ENST00000600196 HSD3B7Q9H2F3 369 aa13.28□□□□□ -0.28
TGFB1-204ENST00000600196 SAMSN1Q9NSI8 373 aaKnown RBP13.28□□□□□ -0.28
TGFB1-204ENST00000600196 DPP3Q9NY33 737 aa13.28□□□□□ -0.28
TGFB1-204ENST00000600196 CITO14578 2027 aa13.28□□□□□ -0.28
TGFB1-204ENST00000600196 TMEM265A0A087WTH1 108 aa13.27□□□□□ -0.29
TGFB1-204ENST00000600196 LRRIQ3A6PVS8 624 aaPredicted RBP13.27□□□□□ -0.29
TGFB1-204ENST00000600196 PIRO00625 290 aa13.27□□□□□ -0.29
TGFB1-204ENST00000600196 MEFVO15553 781 aaPredicted RBP13.27□□□□□ -0.29
TGFB1-204ENST00000600196 TRAPPC3O43617 180 aa13.27□□□□□ -0.29
TGFB1-204ENST00000600196 UPP2O95045 317 aa13.27□□□□□ -0.29
TGFB1-204ENST00000600196 TPM3P06753 285 aa13.27□□□□□ -0.29
TGFB1-204ENST00000600196 DLATP10515 647 aaKnown RBP13.27□□□□□ -0.29
TGFB1-204ENST00000600196 FGFR1P11362 822 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms