RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 KIFAP3Q92845 792 aa16.14■□□□□ 0.17
IRF3-223ENST00000599223 FGF13Q92913 245 aa16.14■□□□□ 0.17
IRF3-223ENST00000599223 NXPE3Q969Y0 559 aa16.14■□□□□ 0.17
IRF3-223ENST00000599223 SNX27Q96L92 541 aa16.14■□□□□ 0.17
IRF3-223ENST00000599223 FOXQ1Q9C009 403 aa16.14■□□□□ 0.17
IRF3-223ENST00000599223 SLC2A4RGQ9NR83 387 aa16.14■□□□□ 0.17
IRF3-223ENST00000599223 DLGAP2Q9P1A6 1054 aa16.14■□□□□ 0.17
IRF3-223ENST00000599223 LRWD1Q9UFC0 647 aa16.14■□□□□ 0.17
IRF3-223ENST00000599223 CDH7Q9ULB5 785 aa16.14■□□□□ 0.17
IRF3-223ENST00000599223 PCDHB6Q9Y5E3 794 aa16.14■□□□□ 0.17
IRF3-223ENST00000599223 DNAH14Q0VDD8 3507 aa16.14■□□□□ 0.17
IRF3-223ENST00000599223 OTOGLQ3ZCN5 2332 aa16.14■□□□□ 0.17
IRF3-223ENST00000599223 COL4A2P08572 1712 aa16.14■□□□□ 0.17
IRF3-223ENST00000599223 E9PMD0 336 aa16.13■□□□□ 0.17
IRF3-223ENST00000599223 ABLIM1O14639 778 aa16.13■□□□□ 0.17
IRF3-223ENST00000599223 LRRN2O75325 713 aa16.13■□□□□ 0.17
IRF3-223ENST00000599223 GLULP15104 373 aa16.13■□□□□ 0.17
IRF3-223ENST00000599223 MUTP22033 750 aa16.13■□□□□ 0.17
IRF3-223ENST00000599223 CDC25AP30304 524 aa16.13■□□□□ 0.17
IRF3-223ENST00000599223 BRCC3P46736 316 aa16.13■□□□□ 0.17
IRF3-223ENST00000599223 NPTX2P47972 431 aa16.13■□□□□ 0.17
IRF3-223ENST00000599223 TRAPPC10P48553 1259 aa16.13■□□□□ 0.17
IRF3-223ENST00000599223 RBM25P49756 843 aaKnown RBP16.13■□□□□ 0.17
IRF3-223ENST00000599223 EFNA5P52803 228 aa16.13■□□□□ 0.17
IRF3-223ENST00000599223 PEX3P56589 373 aa16.13■□□□□ 0.17
IRF3-223ENST00000599223 ELAVL2Q12926 359 aaKnown RBP16.13■□□□□ 0.17
IRF3-223ENST00000599223 SPECC1Q5M775 1068 aa16.13■□□□□ 0.17
IRF3-223ENST00000599223 AXDND1Q5T1B0 1012 aaPredicted RBP16.13■□□□□ 0.17
IRF3-223ENST00000599223 POTEHQ6S545 545 aa16.13■□□□□ 0.17
IRF3-223ENST00000599223 NPAS3Q8IXF0 933 aa16.13■□□□□ 0.17
IRF3-223ENST00000599223 TMEM130Q8N3G9 435 aa16.13■□□□□ 0.17
IRF3-223ENST00000599223 IFT74Q96LB3 600 aa16.13■□□□□ 0.17
IRF3-223ENST00000599223 ZMAT2Q96NC0 199 aaKnown RBP16.13■□□□□ 0.17
IRF3-223ENST00000599223 MMTAG2Q9BU76 263 aaKnown RBP16.13■□□□□ 0.17
IRF3-223ENST00000599223 PTPRHQ9HD43 1115 aa16.13■□□□□ 0.17
IRF3-223ENST00000599223 ARHGAP28Q9P2N2 729 aa16.13■□□□□ 0.17
IRF3-223ENST00000599223 POLIQ9UNA4 740 aa16.13■□□□□ 0.17
IRF3-223ENST00000599223 TNFSF13BQ9Y275 285 aa16.13■□□□□ 0.17
IRF3-223ENST00000599223 CDY1Q9Y6F8 540 aa16.13■□□□□ 0.17
IRF3-223ENST00000599223 SMIM28A0A1B0GU29 152 aa16.12■□□□□ 0.17
IRF3-223ENST00000599223 STK25O00506 426 aa16.12■□□□□ 0.17
IRF3-223ENST00000599223 HIP1RO75146 1068 aa16.12■□□□□ 0.17
IRF3-223ENST00000599223 U2AF2P26368 475 aaKnown RBP eCLIP16.12■□□□□ 0.171e-7■■■■■ 32.6
IRF3-223ENST00000599223 GRM5P41594 1212 aa16.12■□□□□ 0.17
IRF3-223ENST00000599223 OSTNP61366 133 aa16.12■□□□□ 0.17
IRF3-223ENST00000599223 GPC5P78333 572 aa16.12■□□□□ 0.17
IRF3-223ENST00000599223 HMGN5P82970 282 aaKnown RBP16.12■□□□□ 0.17
IRF3-223ENST00000599223 PTGDRQ13258 359 aa16.12■□□□□ 0.17
IRF3-223ENST00000599223 SLC5A9Q2M3M2 681 aa16.12■□□□□ 0.17
IRF3-223ENST00000599223 ZNF568Q3ZCX4 644 aa16.12■□□□□ 0.17
IRF3-223ENST00000599223 C8orf34Q49A92 452 aa16.12■□□□□ 0.17
IRF3-223ENST00000599223 XKR4Q5GH76 650 aa16.12■□□□□ 0.17
IRF3-223ENST00000599223 ING5Q8WYH8 240 aa16.12■□□□□ 0.17
IRF3-223ENST00000599223 ACO2Q99798 780 aaKnown RBP16.12■□□□□ 0.17
IRF3-223ENST00000599223 KXD1Q9BQD3 176 aa16.12■□□□□ 0.17
IRF3-223ENST00000599223 TARS2Q9BW92 718 aaKnown RBP16.12■□□□□ 0.17
IRF3-223ENST00000599223 DNMT3BQ9UBC3 853 aaKnown RBP16.12■□□□□ 0.17
IRF3-223ENST00000599223 GPR179Q6PRD1 2367 aa16.12■□□□□ 0.17
IRF3-223ENST00000599223 CCDC169A6NNP5 214 aa16.11■□□□□ 0.17
IRF3-223ENST00000599223 NRG2O14511 850 aaPredicted RBP16.11■□□□□ 0.17
IRF3-223ENST00000599223 POU2F2P09086 479 aa16.11■□□□□ 0.17
IRF3-223ENST00000599223 RFX1P22670 979 aa16.11■□□□□ 0.17
IRF3-223ENST00000599223 ANP32AP39687 249 aaKnown RBP16.11■□□□□ 0.17
IRF3-223ENST00000599223 GNL2Q13823 731 aaKnown RBP16.11■□□□□ 0.17
IRF3-223ENST00000599223 PHLDB3Q6NSJ2 640 aa16.11■□□□□ 0.17
IRF3-223ENST00000599223 DCLRE1AQ6PJP8 1040 aa16.11■□□□□ 0.17
IRF3-223ENST00000599223 ALKAL1Q6UXT8 129 aa16.11■□□□□ 0.17
IRF3-223ENST00000599223 ADSSL1Q8N142 457 aa16.11■□□□□ 0.17
IRF3-223ENST00000599223 PJA1Q8NG27 643 aa16.11■□□□□ 0.17
IRF3-223ENST00000599223 NOL7Q9UMY1 257 aaKnown RBP16.11■□□□□ 0.17
IRF3-223ENST00000599223 ZFP37Q9Y6Q3 630 aaPredicted RBP16.11■□□□□ 0.17
IRF3-223ENST00000599223 R4GN57 208 aa16.11■□□□□ 0.17
IRF3-223ENST00000599223 CACNA1AO00555 2505 aa16.11■□□□□ 0.17
IRF3-223ENST00000599223 TSC2P49815 1807 aa16.1■□□□□ 0.17
IRF3-223ENST00000599223 K7ERI5 159 aa16.1■□□□□ 0.17
IRF3-223ENST00000599223 XYLBO75191 536 aa16.1■□□□□ 0.17
IRF3-223ENST00000599223 PROZP22891 400 aa16.1■□□□□ 0.17
IRF3-223ENST00000599223 ROR1Q01973 937 aa16.1■□□□□ 0.17
IRF3-223ENST00000599223 DMP1Q13316 513 aaPredicted RBP16.1■□□□□ 0.17
IRF3-223ENST00000599223 PABPC1LQ4VXU2 614 aaKnown RBP16.1■□□□□ 0.17
IRF3-223ENST00000599223 PDXDC1Q6P996 788 aa16.1■□□□□ 0.17
IRF3-223ENST00000599223 FAM184AQ8NB25 1140 aa16.1■□□□□ 0.17
IRF3-223ENST00000599223 C18orf25Q96B23 403 aaPredicted RBP16.1■□□□□ 0.17
IRF3-223ENST00000599223 BACE2Q9Y5Z0 518 aa16.1■□□□□ 0.17
IRF3-223ENST00000599223 WDR27A2RRH5 827 aa16.09■□□□□ 0.17
IRF3-223ENST00000599223 PODXLO00592 558 aa16.09■□□□□ 0.17
IRF3-223ENST00000599223 HARSP12081 509 aaKnown RBP16.09■□□□□ 0.17
IRF3-223ENST00000599223 STARD6P59095 220 aa16.09■□□□□ 0.17
IRF3-223ENST00000599223 SNW1Q13573 536 aaKnown RBP16.09■□□□□ 0.17
IRF3-223ENST00000599223 VARS2Q5ST30 1063 aaKnown RBP16.09■□□□□ 0.17
IRF3-223ENST00000599223 RINT1Q6NUQ1 792 aa16.09■□□□□ 0.17
IRF3-223ENST00000599223 C1orf186Q6ZWK4 172 aa16.09■□□□□ 0.17
IRF3-223ENST00000599223 MAML2Q8IZL2 1156 aaPredicted RBP16.09■□□□□ 0.17
IRF3-223ENST00000599223 ZBTB45Q96K62 511 aaPredicted RBP16.09■□□□□ 0.17
IRF3-223ENST00000599223 UROC1Q96N76 676 aa16.09■□□□□ 0.17
IRF3-223ENST00000599223 CCDC94Q9BW85 323 aaPredicted RBP16.09■□□□□ 0.17
IRF3-223ENST00000599223 MRPL4Q9BYD3 311 aaKnown RBP16.09■□□□□ 0.17
IRF3-223ENST00000599223 SH2B1Q9NRF2 756 aaPredicted RBP16.09■□□□□ 0.17
IRF3-223ENST00000599223 SIT1Q9Y3P8 196 aa16.09■□□□□ 0.17
IRF3-223ENST00000599223 MTF2Q9Y483 593 aaPredicted RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms