RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 TMEM130Q8N3G9 435 aa24.88■■□□□ 1.57
IRF3-220ENST00000598108 ACCSQ96QU6 501 aa24.88■■□□□ 1.57
IRF3-220ENST00000598108 MSTO1Q9BUK6 570 aa24.88■■□□□ 1.57
IRF3-220ENST00000598108 MRPL17Q9NRX2 175 aaKnown RBP24.88■■□□□ 1.57
IRF3-220ENST00000598108 PCDHB13Q9Y5F0 798 aa24.88■■□□□ 1.57
IRF3-220ENST00000598108 TTC28Q96AY4 2481 aa24.88■■□□□ 1.57
IRF3-220ENST00000598108 TTC26A0AVF1 554 aa24.87■■□□□ 1.57
IRF3-220ENST00000598108 PRPF6O94906 941 aaKnown RBP24.87■■□□□ 1.57
IRF3-220ENST00000598108 CNPP09543 421 aaKnown RBP24.87■■□□□ 1.57
IRF3-220ENST00000598108 IL9P15248 144 aa24.87■■□□□ 1.57
IRF3-220ENST00000598108 SPAG1Q07617 926 aa24.87■■□□□ 1.57
IRF3-220ENST00000598108 CUL4BQ13620 913 aa24.87■■□□□ 1.57
IRF3-220ENST00000598108 ENOX2Q16206 610 aaKnown RBP24.87■■□□□ 1.57
IRF3-220ENST00000598108 UPP1Q16831 310 aa24.87■■□□□ 1.57
IRF3-220ENST00000598108 KLHL5Q96PQ7 755 aa24.87■■□□□ 1.57
IRF3-220ENST00000598108 CD207Q9UJ71 328 aa24.87■■□□□ 1.57
IRF3-220ENST00000598108 HCFC2Q9Y5Z7 792 aa24.87■■□□□ 1.57
IRF3-220ENST00000598108 FAM237AA0A1B0GTK4 181 aa24.86■■□□□ 1.57
IRF3-220ENST00000598108 LACTBL1A8MY62 500 aa24.86■■□□□ 1.57
IRF3-220ENST00000598108 GLUD2P49448 558 aa24.86■■□□□ 1.57
IRF3-220ENST00000598108 NDUFA8P51970 172 aa24.86■■□□□ 1.57
IRF3-220ENST00000598108 DSG1Q02413 1049 aa24.86■■□□□ 1.57
IRF3-220ENST00000598108 DCLRE1AQ6PJP8 1040 aa24.86■■□□□ 1.57
IRF3-220ENST00000598108 SLC22A17Q8WUG5 538 aa24.86■■□□□ 1.57
IRF3-220ENST00000598108 PAGE5Q96GU1 130 aa24.86■■□□□ 1.57
IRF3-220ENST00000598108 PYM1Q9BRP8 204 aaKnown RBP24.86■■□□□ 1.57
IRF3-220ENST00000598108 PLEKHA5Q9HAU0 1116 aa24.86■■□□□ 1.57
IRF3-220ENST00000598108 SLC38A7Q9NVC3 462 aa24.86■■□□□ 1.57
IRF3-220ENST00000598108 CPSF3Q9UKF6 684 aaKnown RBP24.86■■□□□ 1.57
IRF3-220ENST00000598108 B3GAT3O94766 335 aa24.85■■□□□ 1.57
IRF3-220ENST00000598108 URODP06132 367 aa24.85■■□□□ 1.57
IRF3-220ENST00000598108 ACOT2P49753 483 aa24.85■■□□□ 1.57
IRF3-220ENST00000598108 KYAT1Q16773 422 aa24.85■■□□□ 1.57
IRF3-220ENST00000598108 USP41Q3LFD5 358 aa24.85■■□□□ 1.57
IRF3-220ENST00000598108 PUS10Q3MIT2 529 aaKnown RBP24.85■■□□□ 1.57
IRF3-220ENST00000598108 SLFN12LQ6IEE8 588 aa24.85■■□□□ 1.57
IRF3-220ENST00000598108 SYCE2Q6PIF2 218 aa24.85■■□□□ 1.57
IRF3-220ENST00000598108 CEP57L1Q8IYX8 460 aa24.85■■□□□ 1.57
IRF3-220ENST00000598108 TMEM87AQ8NBN3 555 aa24.85■■□□□ 1.57
IRF3-220ENST00000598108 C3orf58Q8NDZ4 430 aa24.85■■□□□ 1.57
IRF3-220ENST00000598108 UHRF1Q96T88 793 aaPredicted RBP24.85■■□□□ 1.57
IRF3-220ENST00000598108 GOLPH3LQ9H4A5 285 aa24.85■■□□□ 1.57
IRF3-220ENST00000598108 RPF1Q9H9Y2 349 aaKnown RBP24.85■■□□□ 1.57
IRF3-220ENST00000598108 AGO2Q9UKV8 859 aaKnown RBP24.85■■□□□ 1.57
IRF3-220ENST00000598108 SF3B1O75533 1304 aaKnown RBP eCLIP24.85■■□□□ 1.576e-8■■■■■ 54.2
IRF3-220ENST00000598108 A0A1W2PQ27 194 aa24.84■■□□□ 1.57
IRF3-220ENST00000598108 A0A1W2PQ64 194 aa24.84■■□□□ 1.57
IRF3-220ENST00000598108 A0A1W2PQD8 194 aa24.84■■□□□ 1.57
IRF3-220ENST00000598108 FSD2A1L4K1 749 aa24.84■■□□□ 1.57
IRF3-220ENST00000598108 MBTPS2O43462 519 aa24.84■■□□□ 1.57
IRF3-220ENST00000598108 ADRB2P07550 413 aa24.84■■□□□ 1.57
IRF3-220ENST00000598108 EPCAMP16422 314 aa24.84■■□□□ 1.57
IRF3-220ENST00000598108 HOXD13P35453 343 aa24.84■■□□□ 1.57
IRF3-220ENST00000598108 EHHADHQ08426 723 aa24.84■■□□□ 1.57
IRF3-220ENST00000598108 FAM171A1Q5VUB5 890 aa24.84■■□□□ 1.57
IRF3-220ENST00000598108 KIAA1841Q6NSI8 718 aa24.84■■□□□ 1.57
IRF3-220ENST00000598108 ANKRD54Q6NXT1 300 aa24.84■■□□□ 1.57
IRF3-220ENST00000598108 UNC13DQ70J99 1090 aa24.84■■□□□ 1.57
IRF3-220ENST00000598108 FSIP1Q8NA03 581 aa24.84■■□□□ 1.57
IRF3-220ENST00000598108 SMRP1Q8NCR6 262 aa24.84■■□□□ 1.57
IRF3-220ENST00000598108 ZSWIM2Q8NEG5 633 aa24.84■■□□□ 1.57
IRF3-220ENST00000598108 UROC1Q96N76 676 aa24.84■■□□□ 1.57
IRF3-220ENST00000598108 RXFP1Q9HBX9 757 aa24.84■■□□□ 1.57
IRF3-220ENST00000598108 TUBGCP4Q9UGJ1 667 aa24.84■■□□□ 1.57
IRF3-220ENST00000598108 EXOC7Q9UPT5 735 aa24.84■■□□□ 1.57
IRF3-220ENST00000598108 TMEM189-UBE2V1I3L0A0 370 aa24.83■■□□□ 1.57
IRF3-220ENST00000598108 TEX28O15482 410 aa24.83■■□□□ 1.57
IRF3-220ENST00000598108 KLRC2P26717 231 aa24.83■■□□□ 1.57
IRF3-220ENST00000598108 SYKP43405 635 aa24.83■■□□□ 1.57
IRF3-220ENST00000598108 SMAD4Q13485 552 aaKnown RBP24.83■■□□□ 1.57
IRF3-220ENST00000598108 ALCAMQ13740 583 aa24.83■■□□□ 1.57
IRF3-220ENST00000598108 ZBTB6Q15916 424 aa24.83■■□□□ 1.57
IRF3-220ENST00000598108 RTP2Q5QGT7 225 aa24.83■■□□□ 1.57
IRF3-220ENST00000598108 CRELD2Q6UXH1 353 aaPredicted RBP24.83■■□□□ 1.57
IRF3-220ENST00000598108 RIN2Q8WYP3 895 aaPredicted RBP24.83■■□□□ 1.57
IRF3-220ENST00000598108 POMGNT1Q8WZA1 660 aa24.83■■□□□ 1.57
IRF3-220ENST00000598108 KIF12Q96FN5 646 aa24.83■■□□□ 1.57
IRF3-220ENST00000598108 DDX27Q96GQ7 796 aaKnown RBP24.83■■□□□ 1.57
IRF3-220ENST00000598108 APOL5Q9BWW9 433 aa24.83■■□□□ 1.57
IRF3-220ENST00000598108 EMILIN2Q9BXX0 1053 aa24.83■■□□□ 1.57
IRF3-220ENST00000598108 S1PR5Q9H228 398 aa24.83■■□□□ 1.57
IRF3-220ENST00000598108 SSX2IPQ9Y2D8 614 aa24.83■■□□□ 1.57
IRF3-220ENST00000598108 TDRD15B5MCY1 1934 aaKnown RBP24.82■■□□□ 1.56
IRF3-220ENST00000598108 I3L4J1 428 aa24.82■■□□□ 1.56
IRF3-220ENST00000598108 PODXLO00592 558 aa24.82■■□□□ 1.56
IRF3-220ENST00000598108 POSTNQ15063 836 aa24.82■■□□□ 1.56
IRF3-220ENST00000598108 FAM26FQ5R3K3 315 aa24.82■■□□□ 1.56
IRF3-220ENST00000598108 EPM2AIP1Q7L775 607 aaPredicted RBP24.82■■□□□ 1.56
IRF3-220ENST00000598108 SYCP3Q8IZU3 236 aa24.82■■□□□ 1.56
IRF3-220ENST00000598108 CASP10Q92851 521 aa24.82■■□□□ 1.56
IRF3-220ENST00000598108 FAM212AQ96EL1 285 aa24.82■■□□□ 1.56
IRF3-220ENST00000598108 USP25Q9UHP3 1055 aa24.82■■□□□ 1.56
IRF3-220ENST00000598108 PVALEFA0A1B0GWK0 134 aa24.81■■□□□ 1.56
IRF3-220ENST00000598108 KLRC4O43908 158 aa24.81■■□□□ 1.56
IRF3-220ENST00000598108 RPL17P18621 184 aaKnown RBP24.81■■□□□ 1.56
IRF3-220ENST00000598108 RPL9P32969 192 aaKnown RBP24.81■■□□□ 1.56
IRF3-220ENST00000598108 BRCC3P46736 316 aa24.81■■□□□ 1.56
IRF3-220ENST00000598108 CLCN4P51793 760 aa24.81■■□□□ 1.56
IRF3-220ENST00000598108 PPP2R3AQ06190 1150 aa24.81■■□□□ 1.56
IRF3-220ENST00000598108 SMAD2Q15796 467 aaKnown RBP24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms