RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 KRT2P35908 639 aa18.15■□□□□ 0.5
SHKBP1-215ENST00000597649 PABPC1LQ4VXU2 614 aaKnown RBP18.15■□□□□ 0.5
SHKBP1-215ENST00000597649 TSSK4Q6SA08 328 aa18.15■□□□□ 0.5
SHKBP1-215ENST00000597649 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.15■□□□□ 0.5
SHKBP1-215ENST00000597649 MCRS1Q96EZ8 462 aa18.15■□□□□ 0.5
SHKBP1-215ENST00000597649 TMEM60Q9H2L4 133 aa18.15■□□□□ 0.5
SHKBP1-215ENST00000597649 MTRRQ9UBK8 725 aa18.15■□□□□ 0.5
SHKBP1-215ENST00000597649 KCNH3Q9ULD8 1083 aa18.15■□□□□ 0.5
SHKBP1-215ENST00000597649 PCDHGA2Q9Y5H1 932 aa18.15■□□□□ 0.5
SHKBP1-215ENST00000597649 VWA8A3KMH1 1905 aa18.15■□□□□ 0.5
SHKBP1-215ENST00000597649 BTBD18B2RXH4 712 aa18.14■□□□□ 0.49
SHKBP1-215ENST00000597649 NRG2O14511 850 aaPredicted RBP18.14■□□□□ 0.49
SHKBP1-215ENST00000597649 N4BP3O15049 544 aa18.14■□□□□ 0.49
SHKBP1-215ENST00000597649 SPTLC1O15269 473 aa18.14■□□□□ 0.49
SHKBP1-215ENST00000597649 LILRB5O75023 590 aa18.14■□□□□ 0.49
SHKBP1-215ENST00000597649 MED24O75448 989 aa18.14■□□□□ 0.49
SHKBP1-215ENST00000597649 LARGE1O95461 756 aa18.14■□□□□ 0.49
SHKBP1-215ENST00000597649 ATP2B1P20020 1258 aa18.14■□□□□ 0.49
SHKBP1-215ENST00000597649 TGM1P22735 817 aa18.14■□□□□ 0.49
SHKBP1-215ENST00000597649 PFKPQ01813 784 aa18.14■□□□□ 0.49
SHKBP1-215ENST00000597649 ELAVL2Q12926 359 aaKnown RBP18.14■□□□□ 0.49
SHKBP1-215ENST00000597649 PRPF4BQ13523 1007 aaKnown RBP18.14■□□□□ 0.49
SHKBP1-215ENST00000597649 ZBTB41Q5SVQ8 909 aa18.14■□□□□ 0.49
SHKBP1-215ENST00000597649 TANGO2Q6ICL3 276 aa18.14■□□□□ 0.49
SHKBP1-215ENST00000597649 TPRG1Q6ZUI0 275 aa18.14■□□□□ 0.49
SHKBP1-215ENST00000597649 CATSPER3Q86XQ3 398 aa18.14■□□□□ 0.49
SHKBP1-215ENST00000597649 ATRIPQ8WXE1 791 aa18.14■□□□□ 0.49
SHKBP1-215ENST00000597649 GTF3C6Q969F1 213 aa18.14■□□□□ 0.49
SHKBP1-215ENST00000597649 CCDC43Q96MW1 224 aaKnown RBP18.14■□□□□ 0.49
SHKBP1-215ENST00000597649 CCDC113Q9H0I3 377 aa18.14■□□□□ 0.49
SHKBP1-215ENST00000597649 POLD4Q9HCU8 107 aa18.14■□□□□ 0.49
SHKBP1-215ENST00000597649 GDAQ9Y2T3 454 aa18.14■□□□□ 0.49
SHKBP1-215ENST00000597649 CDY1Q9Y6F8 540 aa18.14■□□□□ 0.49
SHKBP1-215ENST00000597649 MIA3Q5JRA6 1907 aa18.13■□□□□ 0.49
SHKBP1-215ENST00000597649 I3L4J1 428 aa18.13■□□□□ 0.49
SHKBP1-215ENST00000597649 ACKR2O00590 384 aa18.13■□□□□ 0.49
SHKBP1-215ENST00000597649 NEMFO60524 1076 aa18.13■□□□□ 0.49
SHKBP1-215ENST00000597649 ECI2O75521 394 aa18.13■□□□□ 0.49
SHKBP1-215ENST00000597649 B3GAT3O94766 335 aa18.13■□□□□ 0.49
SHKBP1-215ENST00000597649 CD2BP2O95400 341 aaKnown RBP18.13■□□□□ 0.49
SHKBP1-215ENST00000597649 RHOP08100 348 aa18.13■□□□□ 0.49
SHKBP1-215ENST00000597649 TKTP29401 623 aaKnown RBP18.13■□□□□ 0.49
SHKBP1-215ENST00000597649 CLCNKBP51801 687 aa18.13■□□□□ 0.49
SHKBP1-215ENST00000597649 ATXN1P54253 815 aaKnown RBP18.13■□□□□ 0.49
SHKBP1-215ENST00000597649 PDXDC1Q6P996 788 aa18.13■□□□□ 0.49
SHKBP1-215ENST00000597649 CCDC83Q8IWF9 413 aa18.13■□□□□ 0.49
SHKBP1-215ENST00000597649 HSCBQ8IWL3 235 aa18.13■□□□□ 0.49
SHKBP1-215ENST00000597649 ZBTB8OSQ8IWT0 167 aa18.13■□□□□ 0.49
SHKBP1-215ENST00000597649 ZNF687Q8N1G0 1237 aa18.13■□□□□ 0.49
SHKBP1-215ENST00000597649 CNTNAP3BQ96NU0 1288 aa18.13■□□□□ 0.49
SHKBP1-215ENST00000597649 PPP1R10Q96QC0 940 aaKnown RBP18.13■□□□□ 0.49
SHKBP1-215ENST00000597649 CNTNAP3Q9BZ76 1288 aa18.13■□□□□ 0.49
SHKBP1-215ENST00000597649 HEBP1Q9NRV9 189 aa18.13■□□□□ 0.49
SHKBP1-215ENST00000597649 ZSCAN32Q9NX65 697 aa18.13■□□□□ 0.49
SHKBP1-215ENST00000597649 NCDNQ9UBB6 729 aa18.13■□□□□ 0.49
SHKBP1-215ENST00000597649 MRPS23Q9Y3D9 190 aaKnown RBP18.13■□□□□ 0.49
SHKBP1-215ENST00000597649 TMEM189-UBE2V1I3L0A0 370 aa18.12■□□□□ 0.49
SHKBP1-215ENST00000597649 PRKCBP05771 671 aa18.12■□□□□ 0.49
SHKBP1-215ENST00000597649 LIG1P18858 919 aa18.12■□□□□ 0.49
SHKBP1-215ENST00000597649 MAPK6Q16659 721 aa18.12■□□□□ 0.49
SHKBP1-215ENST00000597649 GLRA4Q5JXX5 417 aa18.12■□□□□ 0.49
SHKBP1-215ENST00000597649 NT5DC1Q5TFE4 455 aa18.12■□□□□ 0.49
SHKBP1-215ENST00000597649 C3orf58Q8NDZ4 430 aa18.12■□□□□ 0.49
SHKBP1-215ENST00000597649 MCPH1Q8NEM0 835 aa18.12■□□□□ 0.49
SHKBP1-215ENST00000597649 DDX27Q96GQ7 796 aaKnown RBP18.12■□□□□ 0.49
SHKBP1-215ENST00000597649 BORCS6Q96GS4 357 aa18.12■□□□□ 0.49
SHKBP1-215ENST00000597649 TMX3Q96JJ7 454 aa18.12■□□□□ 0.49
SHKBP1-215ENST00000597649 EPC1Q9H2F5 836 aa18.12■□□□□ 0.49
SHKBP1-215ENST00000597649 GOLGA2P5Q9HBQ8 144 aa18.12■□□□□ 0.49
SHKBP1-215ENST00000597649 GDE1Q9NZC3 331 aa18.12■□□□□ 0.49
SHKBP1-215ENST00000597649 SMG5Q9UPR3 1016 aaKnown RBP18.12■□□□□ 0.49
SHKBP1-215ENST00000597649 BACE2Q9Y5Z0 518 aa18.12■□□□□ 0.49
SHKBP1-215ENST00000597649 CEBPBP17676 345 aa18.11■□□□□ 0.49
SHKBP1-215ENST00000597649 FCARP24071 287 aa18.11■□□□□ 0.49
SHKBP1-215ENST00000597649 MAGEA9P43362 315 aa18.11■□□□□ 0.49
SHKBP1-215ENST00000597649 BRCC3P46736 316 aa18.11■□□□□ 0.49
SHKBP1-215ENST00000597649 RPS9P46781 194 aaKnown RBP18.11■□□□□ 0.49
SHKBP1-215ENST00000597649 MTAPQ13126 283 aa18.11■□□□□ 0.49
SHKBP1-215ENST00000597649 UPP1Q16831 310 aa18.11■□□□□ 0.49
SHKBP1-215ENST00000597649 ZNF852Q6ZMS4 543 aa18.11■□□□□ 0.49
SHKBP1-215ENST00000597649 RTL10Q7L3V2 364 aa18.11■□□□□ 0.49
SHKBP1-215ENST00000597649 WASF1Q92558 559 aa18.11■□□□□ 0.49
SHKBP1-215ENST00000597649 SNX21Q969T3 373 aa18.11■□□□□ 0.49
SHKBP1-215ENST00000597649 TCEAL4Q96EI5 215 aa18.11■□□□□ 0.49
SHKBP1-215ENST00000597649 NELL2Q99435 816 aa18.11■□□□□ 0.49
SHKBP1-215ENST00000597649 KIFC3Q9BVG8 833 aa18.11■□□□□ 0.49
SHKBP1-215ENST00000597649 C2orf40Q9H1Z8 148 aa18.11■□□□□ 0.49
SHKBP1-215ENST00000597649 AVENQ9NQS1 362 aaPredicted RBP18.11■□□□□ 0.49
SHKBP1-215ENST00000597649 PRMT8Q9NR22 394 aaPredicted RBP18.11■□□□□ 0.49
SHKBP1-215ENST00000597649 PATJQ8NI35 1801 aa18.1■□□□□ 0.49
SHKBP1-215ENST00000597649 KRT37O76014 449 aa18.1■□□□□ 0.49
SHKBP1-215ENST00000597649 TDGF1P13385 188 aa18.1■□□□□ 0.49
SHKBP1-215ENST00000597649 CYP11B2P19099 503 aa18.1■□□□□ 0.49
SHKBP1-215ENST00000597649 SOX4Q06945 474 aaPredicted RBP18.1■□□□□ 0.49
SHKBP1-215ENST00000597649 TMEM132AQ24JP5 1023 aa18.1■□□□□ 0.49
SHKBP1-215ENST00000597649 PRSS36Q5K4E3 855 aa18.1■□□□□ 0.49
SHKBP1-215ENST00000597649 PADI6Q6TGC4 694 aa18.1■□□□□ 0.49
SHKBP1-215ENST00000597649 NACC1Q96RE7 527 aa18.1■□□□□ 0.49
SHKBP1-215ENST00000597649 ADPGKQ9BRR6 497 aa18.1■□□□□ 0.49
SHKBP1-215ENST00000597649 TUFT1Q9NNX1 390 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms