RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 I3L4J1 428 aa16.62■□□□□ 0.25
TGFB1-202ENST00000597453 SLC16A4O15374 487 aa16.62■□□□□ 0.25
TGFB1-202ENST00000597453 MEFVO15553 781 aaPredicted RBP16.62■□□□□ 0.25
TGFB1-202ENST00000597453 C8AP07357 584 aa16.62■□□□□ 0.25
TGFB1-202ENST00000597453 CFHP08603 1231 aa16.62■□□□□ 0.25
TGFB1-202ENST00000597453 PROZP22891 400 aa16.62■□□□□ 0.25
TGFB1-202ENST00000597453 NTHL1P78549 312 aa16.62■□□□□ 0.25
TGFB1-202ENST00000597453 RAD51AP2Q09MP3 1159 aa16.62■□□□□ 0.25
TGFB1-202ENST00000597453 UPP1Q16831 310 aa16.62■□□□□ 0.25
TGFB1-202ENST00000597453 XKR4Q5GH76 650 aa16.62■□□□□ 0.25
TGFB1-202ENST00000597453 HYIQ5T013 277 aa16.62■□□□□ 0.25
TGFB1-202ENST00000597453 DCLRE1AQ6PJP8 1040 aa16.62■□□□□ 0.25
TGFB1-202ENST00000597453 ALKAL1Q6UXT8 129 aa16.62■□□□□ 0.25
TGFB1-202ENST00000597453 RSPO2Q6UXX9 243 aaPredicted RBP16.62■□□□□ 0.25
TGFB1-202ENST00000597453 BRAPQ7Z569 592 aa16.62■□□□□ 0.25
TGFB1-202ENST00000597453 APBB1IPQ7Z5R6 666 aaPredicted RBP16.62■□□□□ 0.25
TGFB1-202ENST00000597453 GRASPQ7Z6J2 395 aaPredicted RBP16.62■□□□□ 0.25
TGFB1-202ENST00000597453 SIX5Q8N196 739 aa16.62■□□□□ 0.25
TGFB1-202ENST00000597453 ATOH1Q92858 354 aaPredicted RBP16.62■□□□□ 0.25
TGFB1-202ENST00000597453 ZMAT2Q96NC0 199 aaKnown RBP16.62■□□□□ 0.25
TGFB1-202ENST00000597453 PLIN2Q99541 437 aa16.62■□□□□ 0.25
TGFB1-202ENST00000597453 CCDC94Q9BW85 323 aaPredicted RBP16.62■□□□□ 0.25
TGFB1-202ENST00000597453 FBXL21Q9UKT6 434 aa16.62■□□□□ 0.25
TGFB1-202ENST00000597453 VWA3AA6NCI4 1184 aa16.61■□□□□ 0.25
TGFB1-202ENST00000597453 PI15O43692 258 aa16.61■□□□□ 0.25
TGFB1-202ENST00000597453 LAMP2P13473 410 aa16.61■□□□□ 0.25
TGFB1-202ENST00000597453 SYT1P21579 422 aa16.61■□□□□ 0.25
TGFB1-202ENST00000597453 GUCY2CP25092 1073 aa16.61■□□□□ 0.25
TGFB1-202ENST00000597453 TKTP29401 623 aaKnown RBP16.61■□□□□ 0.25
TGFB1-202ENST00000597453 OR1D2P34982 312 aa16.61■□□□□ 0.25
TGFB1-202ENST00000597453 BRCC3P46736 316 aa16.61■□□□□ 0.25
TGFB1-202ENST00000597453 CLCN5P51795 746 aa16.61■□□□□ 0.25
TGFB1-202ENST00000597453 PPM1LQ5SGD2 360 aa16.61■□□□□ 0.25
TGFB1-202ENST00000597453 LIN9Q5TKA1 542 aa16.61■□□□□ 0.25
TGFB1-202ENST00000597453 PDXDC1Q6P996 788 aa16.61■□□□□ 0.25
TGFB1-202ENST00000597453 SLC44A3Q8N4M1 653 aa16.61■□□□□ 0.25
TGFB1-202ENST00000597453 DDX27Q96GQ7 796 aaKnown RBP16.61■□□□□ 0.25
TGFB1-202ENST00000597453 SNX27Q96L92 541 aa16.61■□□□□ 0.25
TGFB1-202ENST00000597453 UROC1Q96N76 676 aa16.61■□□□□ 0.25
TGFB1-202ENST00000597453 FOXD4L1Q9NU39 408 aa16.61■□□□□ 0.25
TGFB1-202ENST00000597453 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.61■□□□□ 0.25
TGFB1-202ENST00000597453 MTRRQ9UBK8 725 aa16.61■□□□□ 0.25
TGFB1-202ENST00000597453 CCL16O15467 120 aa16.6■□□□□ 0.25
TGFB1-202ENST00000597453 HNRNPA1P09651 372 aaKnown RBP eCLIP16.6■□□□□ 0.25
TGFB1-202ENST00000597453 MCF2P10911 925 aa16.6■□□□□ 0.25
TGFB1-202ENST00000597453 HARSP12081 509 aaKnown RBP16.6■□□□□ 0.25
TGFB1-202ENST00000597453 AOC1P19801 751 aa16.6■□□□□ 0.25
TGFB1-202ENST00000597453 FSHRP23945 695 aa16.6■□□□□ 0.25
TGFB1-202ENST00000597453 YARSP54577 528 aaKnown RBP16.6■□□□□ 0.25
TGFB1-202ENST00000597453 HTR4Q13639 388 aa16.6■□□□□ 0.25
TGFB1-202ENST00000597453 RAB33AQ14088 237 aa16.6■□□□□ 0.25
TGFB1-202ENST00000597453 MPZL3Q6UWV2 235 aa16.6■□□□□ 0.25
TGFB1-202ENST00000597453 SYT2Q8N9I0 419 aaPredicted RBP16.6■□□□□ 0.25
TGFB1-202ENST00000597453 SLC7A14Q8TBB6 771 aa16.6■□□□□ 0.25
TGFB1-202ENST00000597453 ZBTB45Q96K62 511 aaPredicted RBP16.6■□□□□ 0.25
TGFB1-202ENST00000597453 NTPCRQ9BSD7 190 aaKnown RBP16.6■□□□□ 0.25
TGFB1-202ENST00000597453 C17orf75Q9HAS0 396 aa16.6■□□□□ 0.25
TGFB1-202ENST00000597453 TOPORSQ9NS56 1045 aaPredicted RBP16.6■□□□□ 0.25
TGFB1-202ENST00000597453 DAXXQ9UER7 740 aaPredicted RBP16.6■□□□□ 0.25
TGFB1-202ENST00000597453 RBM19Q9Y4C8 960 aaKnown RBP16.6■□□□□ 0.25
TGFB1-202ENST00000597453 CDY1Q9Y6F8 540 aa16.6■□□□□ 0.25
TGFB1-202ENST00000597453 NPHP3-ACAD11A0A0J9YXS1 232 aa16.59■□□□□ 0.25
TGFB1-202ENST00000597453 KRBA1A5PL33 1030 aa16.59■□□□□ 0.25
TGFB1-202ENST00000597453 ANHXE9PGG2 379 aa16.59■□□□□ 0.25
TGFB1-202ENST00000597453 HSP90AA1P07900 732 aaKnown RBP16.59■□□□□ 0.25
TGFB1-202ENST00000597453 HOXA9P31269 272 aa16.59■□□□□ 0.25
TGFB1-202ENST00000597453 SLC12A3P55017 1021 aa16.59■□□□□ 0.25
TGFB1-202ENST00000597453 CACNB1Q02641 598 aaPredicted RBP16.59■□□□□ 0.25
TGFB1-202ENST00000597453 TMEM119Q4V9L6 283 aa16.59■□□□□ 0.25
TGFB1-202ENST00000597453 SEZ6Q53EL9 994 aa16.59■□□□□ 0.25
TGFB1-202ENST00000597453 AXDND1Q5T1B0 1012 aaPredicted RBP16.59■□□□□ 0.25
TGFB1-202ENST00000597453 SPIRE2Q8WWL2 714 aa16.59■□□□□ 0.25
TGFB1-202ENST00000597453 ACAP3Q96P50 834 aa16.59■□□□□ 0.25
TGFB1-202ENST00000597453 TCHPQ9BT92 498 aa16.59■□□□□ 0.25
TGFB1-202ENST00000597453 TIPINQ9BVW5 301 aa16.59■□□□□ 0.25
TGFB1-202ENST00000597453 IRF2BPLQ9H1B7 796 aa16.59■□□□□ 0.25
TGFB1-202ENST00000597453 ANKFY1Q9P2R3 1169 aa16.59■□□□□ 0.25
TGFB1-202ENST00000597453 WNT16Q9UBV4 365 aa16.59■□□□□ 0.25
TGFB1-202ENST00000597453 CA14Q9ULX7 337 aa16.59■□□□□ 0.25
TGFB1-202ENST00000597453 BACE2Q9Y5Z0 518 aa16.59■□□□□ 0.25
TGFB1-202ENST00000597453 NUMBLQ9Y6R0 609 aa16.59■□□□□ 0.25
TGFB1-202ENST00000597453 RIF1Q5UIP0 2472 aaKnown RBP16.58■□□□□ 0.25
TGFB1-202ENST00000597453 PODXLO00592 558 aa16.58■□□□□ 0.24
TGFB1-202ENST00000597453 PLA2G4BP0C869 781 aa16.58■□□□□ 0.24
TGFB1-202ENST00000597453 MAPTP10636 758 aaKnown RBP16.58■□□□□ 0.24
TGFB1-202ENST00000597453 SRFP11831 508 aa16.58■□□□□ 0.24
TGFB1-202ENST00000597453 PLS3P13797 630 aa16.58■□□□□ 0.24
TGFB1-202ENST00000597453 KCNE1P15382 129 aa16.58■□□□□ 0.24
TGFB1-202ENST00000597453 ARSHQ5FYA8 562 aa16.58■□□□□ 0.24
TGFB1-202ENST00000597453 TMEM161BQ8NDZ6 487 aa16.58■□□□□ 0.24
TGFB1-202ENST00000597453 ITFG1Q8TB96 612 aa16.58■□□□□ 0.24
TGFB1-202ENST00000597453 GPR152Q8TDT2 470 aa16.58■□□□□ 0.24
TGFB1-202ENST00000597453 LRRC15Q8TF66 581 aa16.58■□□□□ 0.24
TGFB1-202ENST00000597453 NXPE3Q969Y0 559 aa16.58■□□□□ 0.24
TGFB1-202ENST00000597453 C18orf25Q96B23 403 aaPredicted RBP16.58■□□□□ 0.24
TGFB1-202ENST00000597453 RPP25Q9BUL9 199 aaKnown RBP16.58■□□□□ 0.24
TGFB1-202ENST00000597453 HCFC1R1Q9NWW0 138 aa16.58■□□□□ 0.24
TGFB1-202ENST00000597453 CNTN3Q9P232 1028 aa16.58■□□□□ 0.24
TGFB1-202ENST00000597453 POLIQ9UNA4 740 aa16.58■□□□□ 0.24
TGFB1-202ENST00000597453 MTMR6Q9Y217 621 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms