RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 HPSEQ9Y251 543 aa12□□□□□ -0.49
SHKBP1-206ENST00000595523 STYXL1Q9Y6J8 313 aa12□□□□□ -0.49
SHKBP1-206ENST00000595523 DOCK8Q8NF50 2099 aa11.99□□□□□ -0.49
SHKBP1-206ENST00000595523 A0A1B0GVL5 298 aa11.99□□□□□ -0.49
SHKBP1-206ENST00000595523 TTC26A0AVF1 554 aa11.99□□□□□ -0.49
SHKBP1-206ENST00000595523 FSD2A1L4K1 749 aa11.99□□□□□ -0.49
SHKBP1-206ENST00000595523 TMEM189-UBE2V1I3L0A0 370 aa11.99□□□□□ -0.49
SHKBP1-206ENST00000595523 C2CD2LO14523 706 aa11.99□□□□□ -0.49
SHKBP1-206ENST00000595523 OGTO15294 1046 aa11.99□□□□□ -0.49
SHKBP1-206ENST00000595523 ACTN4O43707 911 aaKnown RBP11.99□□□□□ -0.49
SHKBP1-206ENST00000595523 GCNT3O95395 438 aa11.99□□□□□ -0.49
SHKBP1-206ENST00000595523 URODP06132 367 aa11.99□□□□□ -0.49
SHKBP1-206ENST00000595523 ADRB2P07550 413 aa11.99□□□□□ -0.49
SHKBP1-206ENST00000595523 CLTAP09496 248 aa11.99□□□□□ -0.49
SHKBP1-206ENST00000595523 PFKFB1P16118 471 aa11.99□□□□□ -0.49
SHKBP1-206ENST00000595523 EPCAMP16422 314 aa11.99□□□□□ -0.49
SHKBP1-206ENST00000595523 CMA1P23946 247 aa11.99□□□□□ -0.49
SHKBP1-206ENST00000595523 ADSSP30520 456 aa11.99□□□□□ -0.49
SHKBP1-206ENST00000595523 ABCD1P33897 745 aa11.99□□□□□ -0.49
SHKBP1-206ENST00000595523 MATR3P43243 847 aaKnown RBP eCLIP11.99□□□□□ -0.49
SHKBP1-206ENST00000595523 GLUD2P49448 558 aa11.99□□□□□ -0.49
SHKBP1-206ENST00000595523 SPAG1Q07617 926 aa11.99□□□□□ -0.49
SHKBP1-206ENST00000595523 EHHADHQ08426 723 aa11.99□□□□□ -0.49
SHKBP1-206ENST00000595523 SMAD4Q13485 552 aaKnown RBP11.99□□□□□ -0.49
SHKBP1-206ENST00000595523 RTP2Q5QGT7 225 aa11.99□□□□□ -0.49
SHKBP1-206ENST00000595523 L1TD1Q5T7N2 865 aaKnown RBP11.99□□□□□ -0.49
SHKBP1-206ENST00000595523 ADALQ6DHV7 355 aa11.99□□□□□ -0.49
SHKBP1-206ENST00000595523 ANKRD54Q6NXT1 300 aa11.99□□□□□ -0.49
SHKBP1-206ENST00000595523 SYCE2Q6PIF2 218 aa11.99□□□□□ -0.49
SHKBP1-206ENST00000595523 GRAMD1CQ8IYS0 662 aa11.99□□□□□ -0.49
SHKBP1-206ENST00000595523 FEZF2Q8TBJ5 459 aa11.99□□□□□ -0.49
SHKBP1-206ENST00000595523 HVCN1Q96D96 273 aa11.99□□□□□ -0.49
SHKBP1-206ENST00000595523 KLHL5Q96PQ7 755 aa11.99□□□□□ -0.49
SHKBP1-206ENST00000595523 C7orf25Q9BPX7 421 aa11.99□□□□□ -0.49
SHKBP1-206ENST00000595523 MSTO1Q9BUK6 570 aa11.99□□□□□ -0.49
SHKBP1-206ENST00000595523 S1PR5Q9H228 398 aa11.99□□□□□ -0.49
SHKBP1-206ENST00000595523 BLZF1Q9H2G9 400 aa11.99□□□□□ -0.49
SHKBP1-206ENST00000595523 MAGEF1Q9HAY2 307 aa11.99□□□□□ -0.49
SHKBP1-206ENST00000595523 GDPD2Q9HCC8 539 aa11.99□□□□□ -0.49
SHKBP1-206ENST00000595523 CD320Q9NPF0 282 aa11.99□□□□□ -0.49
SHKBP1-206ENST00000595523 MRPL17Q9NRX2 175 aaKnown RBP11.99□□□□□ -0.49
SHKBP1-206ENST00000595523 FAM13BQ9NYF5 915 aa11.99□□□□□ -0.49
SHKBP1-206ENST00000595523 SERTAD1Q9UHV2 236 aa11.99□□□□□ -0.49
SHKBP1-206ENST00000595523 CPSF3Q9UKF6 684 aaKnown RBP11.99□□□□□ -0.49
SHKBP1-206ENST00000595523 ATP6V1DQ9Y5K8 247 aa11.99□□□□□ -0.49
SHKBP1-206ENST00000595523 SF3B1O75533 1304 aaKnown RBP eCLIP11.98□□□□□ -0.49
SHKBP1-206ENST00000595523 FAM237AA0A1B0GTK4 181 aa11.98□□□□□ -0.49
SHKBP1-206ENST00000595523 TEX28O15482 410 aa11.98□□□□□ -0.49
SHKBP1-206ENST00000595523 TADA2AO75478 443 aa11.98□□□□□ -0.49
SHKBP1-206ENST00000595523 HOXD13P35453 343 aa11.98□□□□□ -0.49
SHKBP1-206ENST00000595523 CLCN4P51793 760 aa11.98□□□□□ -0.49
SHKBP1-206ENST00000595523 ASIC1P78348 528 aa11.98□□□□□ -0.49
SHKBP1-206ENST00000595523 CUL4BQ13620 913 aa11.98□□□□□ -0.49
SHKBP1-206ENST00000595523 SMAD2Q15796 467 aaKnown RBP11.98□□□□□ -0.49
SHKBP1-206ENST00000595523 ZBTB6Q15916 424 aa11.98□□□□□ -0.49
SHKBP1-206ENST00000595523 USP41Q3LFD5 358 aa11.98□□□□□ -0.49
SHKBP1-206ENST00000595523 PUS10Q3MIT2 529 aaKnown RBP11.98□□□□□ -0.49
SHKBP1-206ENST00000595523 CRELD2Q6UXH1 353 aaPredicted RBP11.98□□□□□ -0.49
SHKBP1-206ENST00000595523 CCDC65Q8IXS2 484 aa11.98□□□□□ -0.49
SHKBP1-206ENST00000595523 ZSWIM2Q8NEG5 633 aa11.98□□□□□ -0.49
SHKBP1-206ENST00000595523 UROC1Q96N76 676 aa11.98□□□□□ -0.49
SHKBP1-206ENST00000595523 GOLPH3LQ9H4A5 285 aa11.98□□□□□ -0.49
SHKBP1-206ENST00000595523 PLEKHA5Q9HAU0 1116 aa11.98□□□□□ -0.49
SHKBP1-206ENST00000595523 RXFP1Q9HBX9 757 aa11.98□□□□□ -0.49
SHKBP1-206ENST00000595523 TUBGCP4Q9UGJ1 667 aa11.98□□□□□ -0.49
SHKBP1-206ENST00000595523 CDH22Q9UJ99 828 aa11.98□□□□□ -0.49
SHKBP1-206ENST00000595523 USP15Q9Y4E8 981 aaPredicted RBP11.98□□□□□ -0.49
SHKBP1-206ENST00000595523 NOTCH4Q99466 2003 aa11.98□□□□□ -0.49
SHKBP1-206ENST00000595523 LACTBL1A8MY62 500 aa11.97□□□□□ -0.49
SHKBP1-206ENST00000595523 KLRC4O43908 158 aa11.97□□□□□ -0.49
SHKBP1-206ENST00000595523 B3GAT3O94766 335 aa11.97□□□□□ -0.49
SHKBP1-206ENST00000595523 PRPF6O94906 941 aaKnown RBP11.97□□□□□ -0.49
SHKBP1-206ENST00000595523 SLFN14P0C7P3 912 aa11.97□□□□□ -0.49
SHKBP1-206ENST00000595523 RPL17P18621 184 aaKnown RBP11.97□□□□□ -0.49
SHKBP1-206ENST00000595523 AFMP43652 599 aa11.97□□□□□ -0.49
SHKBP1-206ENST00000595523 BRCC3P46736 316 aa11.97□□□□□ -0.49
SHKBP1-206ENST00000595523 ACOT2P49753 483 aa11.97□□□□□ -0.49
SHKBP1-206ENST00000595523 NDUFA8P51970 172 aa11.97□□□□□ -0.49
SHKBP1-206ENST00000595523 AMPD3Q01432 767 aa11.97□□□□□ -0.49
SHKBP1-206ENST00000595523 ALCAMQ13740 583 aa11.97□□□□□ -0.49
SHKBP1-206ENST00000595523 BMS1Q14692 1282 aaKnown RBP11.97□□□□□ -0.49
SHKBP1-206ENST00000595523 FAM171A1Q5VUB5 890 aa11.97□□□□□ -0.49
SHKBP1-206ENST00000595523 KANK3Q6NY19 840 aa11.97□□□□□ -0.49
SHKBP1-206ENST00000595523 DCLRE1AQ6PJP8 1040 aa11.97□□□□□ -0.49
SHKBP1-206ENST00000595523 PRSS55Q6UWB4 352 aaPredicted RBP11.97□□□□□ -0.49
SHKBP1-206ENST00000595523 EPM2AIP1Q7L775 607 aaPredicted RBP11.97□□□□□ -0.49
SHKBP1-206ENST00000595523 GPR65Q8IYL9 337 aa11.97□□□□□ -0.49
SHKBP1-206ENST00000595523 SUSD6Q92537 303 aa11.97□□□□□ -0.49
SHKBP1-206ENST00000595523 CASP10Q92851 521 aa11.97□□□□□ -0.49
SHKBP1-206ENST00000595523 ACCSQ96QU6 501 aa11.97□□□□□ -0.49
SHKBP1-206ENST00000595523 APOL5Q9BWW9 433 aa11.97□□□□□ -0.49
SHKBP1-206ENST00000595523 EMILIN2Q9BXX0 1053 aa11.97□□□□□ -0.49
SHKBP1-206ENST00000595523 LRRC27Q9C0I9 530 aa11.97□□□□□ -0.49
SHKBP1-206ENST00000595523 SCAND2PQ9GZW5 306 aaPredicted RBP11.97□□□□□ -0.49
SHKBP1-206ENST00000595523 SLC38A7Q9NVC3 462 aa11.97□□□□□ -0.49
SHKBP1-206ENST00000595523 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.96□□□□□ -0.49
SHKBP1-206ENST00000595523 A0A1W2PQ27 194 aa11.96□□□□□ -0.49
SHKBP1-206ENST00000595523 A0A1W2PQ64 194 aa11.96□□□□□ -0.49
SHKBP1-206ENST00000595523 A0A1W2PQD8 194 aa11.96□□□□□ -0.49
SHKBP1-206ENST00000595523 I3L4J1 428 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms