RNA–Protein interactions for RNA: ENST00000595158.5

UBA52-204, Transcript of ubiquitin A-52 residue ribosomal protein fusion product 1, human

APPRIS P1 TSL 3 BASIC

Gene UBA52, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA52-204	ENST00000595158	ZHX3	Q9H4I2	956 aa		27.6	■■■□□ 2.01
UBA52-204	ENST00000595158	CIT	O14578	2027 aa		27.6	■■■□□ 2.01
UBA52-204	ENST00000595158	HNRNPDL	O14979	420 aa	Known RBP	27.59	■■■□□ 2.01
UBA52-204	ENST00000595158	GLUD1	P00367	558 aa		27.59	■■■□□ 2.01
UBA52-204	ENST00000595158	ABCD1	P33897	745 aa		27.59	■■■□□ 2.01
UBA52-204	ENST00000595158	MTHFR	P42898	656 aa		27.59	■■■□□ 2.01
UBA52-204	ENST00000595158	LIG4	P49917	911 aa		27.59	■■■□□ 2.01
UBA52-204	ENST00000595158	CREM	Q03060	361 aa		27.59	■■■□□ 2.01
UBA52-204	ENST00000595158	HERC4	Q5GLZ8	1057 aa	Predicted RBP	27.59	■■■□□ 2.01
UBA52-204	ENST00000595158	PRSS55	Q6UWB4	352 aa	Predicted RBP	27.59	■■■□□ 2.01
UBA52-204	ENST00000595158	DYM	Q7RTS9	669 aa		27.59	■■■□□ 2.01
UBA52-204	ENST00000595158	SFR1	Q86XK3	245 aa		27.59	■■■□□ 2.01
UBA52-204	ENST00000595158	LNX1	Q8TBB1	728 aa	Predicted RBP	27.59	■■■□□ 2.01
UBA52-204	ENST00000595158	RPGRIP1	Q96KN7	1286 aa		27.59	■■■□□ 2.01
UBA52-204	ENST00000595158	RIPOR3	Q96MK2	946 aa		27.59	■■■□□ 2.01
UBA52-204	ENST00000595158	MAN1C1	Q9NR34	630 aa		27.59	■■■□□ 2.01
UBA52-204	ENST00000595158	PDCD11	Q14690	1871 aa	Known RBP	27.59	■■■□□ 2.01
UBA52-204	ENST00000595158	GPR37L1	O60883	481 aa		27.58	■■■□□ 2.01
UBA52-204	ENST00000595158	PPP1R37	O75864	691 aa		27.58	■■■□□ 2.01
UBA52-204	ENST00000595158	B3GAT3	O94766	335 aa		27.58	■■■□□ 2.01
UBA52-204	ENST00000595158	PAPLN	O95428	1278 aa		27.58	■■■□□ 2.01
UBA52-204	ENST00000595158	WEE2	P0C1S8	567 aa		27.58	■■■□□ 2.01
UBA52-204	ENST00000595158	STAT6	P42226	847 aa		27.58	■■■□□ 2.01
UBA52-204	ENST00000595158	LILRA6	Q6PI73	481 aa		27.58	■■■□□ 2.01
UBA52-204	ENST00000595158	GPR149	Q86SP6	731 aa		27.58	■■■□□ 2.01
UBA52-204	ENST00000595158	CMAS	Q8NFW8	434 aa	Predicted RBP	27.58	■■■□□ 2.01
UBA52-204	ENST00000595158	DDX27	Q96GQ7	796 aa	Known RBP	27.58	■■■□□ 2.01
UBA52-204	ENST00000595158	STRA6	Q9BX79	667 aa		27.58	■■■□□ 2.01
UBA52-204	ENST00000595158	PANK2	Q9BZ23	570 aa		27.58	■■■□□ 2.01
UBA52-204	ENST00000595158	MUTYH	Q9UIF7	546 aa		27.58	■■■□□ 2.01
UBA52-204	ENST00000595158	VWA8	A3KMH1	1905 aa		27.58	■■■□□ 2.01
UBA52-204	ENST00000595158	DENND4A	Q7Z401	1863 aa		27.57	■■■□□ 2
UBA52-204	ENST00000595158		A0A0B4J269	797 aa		27.57	■■■□□ 2
UBA52-204	ENST00000595158	CLTA	P09496	248 aa		27.57	■■■□□ 2
UBA52-204	ENST00000595158	RPL17	P18621	184 aa	Known RBP	27.57	■■■□□ 2
UBA52-204	ENST00000595158	FGFR3	P22607	806 aa		27.57	■■■□□ 2
UBA52-204	ENST00000595158	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	27.57	■■■□□ 2
UBA52-204	ENST00000595158	AXDND1	Q5T1B0	1012 aa	Predicted RBP	27.57	■■■□□ 2
UBA52-204	ENST00000595158	TMC5	Q6UXY8	1006 aa		27.57	■■■□□ 2
UBA52-204	ENST00000595158	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	27.57	■■■□□ 2
UBA52-204	ENST00000595158	ZNF720	Q7Z2F6	126 aa		27.57	■■■□□ 2
UBA52-204	ENST00000595158	HDAC7	Q8WUI4	952 aa		27.57	■■■□□ 2
UBA52-204	ENST00000595158	C18orf25	Q96B23	403 aa	Predicted RBP	27.57	■■■□□ 2
UBA52-204	ENST00000595158	PLEKHA5	Q9HAU0	1116 aa		27.57	■■■□□ 2
UBA52-204	ENST00000595158	SEL1L	Q9UBV2	794 aa		27.57	■■■□□ 2
UBA52-204	ENST00000595158	TTC26	A0AVF1	554 aa		27.56	■■■□□ 2
UBA52-204	ENST00000595158	FRMD3	A2A2Y4	597 aa		27.56	■■■□□ 2
UBA52-204	ENST00000595158	CXCL8	P10145	99 aa		27.56	■■■□□ 2
UBA52-204	ENST00000595158	TNFSF9	P41273	254 aa		27.56	■■■□□ 2
UBA52-204	ENST00000595158	E2F4	Q16254	413 aa		27.56	■■■□□ 2
UBA52-204	ENST00000595158	ATAT1	Q5SQI0	421 aa		27.56	■■■□□ 2
UBA52-204	ENST00000595158	C15orf39	Q6ZRI6	1047 aa		27.56	■■■□□ 2
UBA52-204	ENST00000595158	SPRYD3	Q8NCJ5	442 aa		27.56	■■■□□ 2
UBA52-204	ENST00000595158	CLSTN3	Q9BQT9	956 aa		27.56	■■■□□ 2
UBA52-204	ENST00000595158	RHOBTB2	Q9BYZ6	727 aa		27.56	■■■□□ 2
UBA52-204	ENST00000595158	PODXL	O00592	558 aa		27.55	■■■□□ 2
UBA52-204	ENST00000595158	OGT	O15294	1046 aa		27.55	■■■□□ 2
UBA52-204	ENST00000595158	TGM5	O43548	720 aa		27.55	■■■□□ 2
UBA52-204	ENST00000595158	CUTA	O60888	179 aa		27.55	■■■□□ 2
UBA52-204	ENST00000595158	ADRB2	P07550	413 aa		27.55	■■■□□ 2
UBA52-204	ENST00000595158	GAP43	P17677	238 aa		27.55	■■■□□ 2
UBA52-204	ENST00000595158	MATR3	P43243	847 aa	Known RBP eCLIP	27.55	■■■□□ 2
UBA52-204	ENST00000595158	PSMD5	Q16401	504 aa		27.55	■■■□□ 2
UBA52-204	ENST00000595158	KYAT1	Q16773	422 aa		27.55	■■■□□ 2
UBA52-204	ENST00000595158	TMEM31	Q5JXX7	168 aa		27.55	■■■□□ 2
UBA52-204	ENST00000595158	ZBTB41	Q5SVQ8	909 aa		27.55	■■■□□ 2
UBA52-204	ENST00000595158	ATL3	Q6DD88	541 aa		27.55	■■■□□ 2
UBA52-204	ENST00000595158	SHC4	Q6S5L8	630 aa		27.55	■■■□□ 2
UBA52-204	ENST00000595158	CEP57	Q86XR8	500 aa		27.55	■■■□□ 2
UBA52-204	ENST00000595158	PDILT	Q8N807	584 aa		27.55	■■■□□ 2
UBA52-204	ENST00000595158	HVCN1	Q96D96	273 aa		27.55	■■■□□ 2
UBA52-204	ENST00000595158	LRFN3	Q9BTN0	628 aa		27.55	■■■□□ 2
UBA52-204	ENST00000595158	DPP7	Q9UHL4	492 aa		27.55	■■■□□ 2
UBA52-204	ENST00000595158	RPL9	P32969	192 aa	Known RBP	27.54	■■■□□ 2
UBA52-204	ENST00000595158	ZBTB6	Q15916	424 aa		27.54	■■■□□ 2
UBA52-204	ENST00000595158	PDXDC1	Q6P996	788 aa		27.54	■■■□□ 2
UBA52-204	ENST00000595158	PALB2	Q86YC2	1186 aa		27.54	■■■□□ 2
UBA52-204	ENST00000595158	GLYCTK	Q8IVS8	523 aa		27.54	■■■□□ 2
UBA52-204	ENST00000595158	PLEKHA4	Q9H4M7	779 aa		27.54	■■■□□ 2
UBA52-204	ENST00000595158	OLFML3	Q9NRN5	406 aa		27.54	■■■□□ 2
UBA52-204	ENST00000595158	STYXL1	Q9Y6J8	313 aa		27.54	■■■□□ 2
UBA52-204	ENST00000595158	FAM86C2P	A6NEL3	165 aa		27.53	■■■□□ 2
UBA52-204	ENST00000595158	ANKRD63	C9JTQ0	380 aa		27.53	■■■□□ 2
UBA52-204	ENST00000595158	BRCC3	P46736	316 aa		27.53	■■■□□ 2
UBA52-204	ENST00000595158	ENOX2	Q16206	610 aa	Known RBP	27.53	■■■□□ 2
UBA52-204	ENST00000595158	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	27.53	■■■□□ 2
UBA52-204	ENST00000595158	ELMSAN1	Q6PJG2	1045 aa		27.53	■■■□□ 2
UBA52-204	ENST00000595158	FOXD4L3	Q6VB84	417 aa	Predicted RBP	27.53	■■■□□ 2
UBA52-204	ENST00000595158	KCNG4	Q8TDN1	519 aa		27.53	■■■□□ 2
UBA52-204	ENST00000595158	MTRR	Q9UBK8	725 aa		27.53	■■■□□ 2
UBA52-204	ENST00000595158	TUBGCP4	Q9UGJ1	667 aa		27.53	■■■□□ 2
UBA52-204	ENST00000595158	CPSF3	Q9UKF6	684 aa	Known RBP	27.53	■■■□□ 2
UBA52-204	ENST00000595158	NR2E1	Q9Y466	385 aa		27.53	■■■□□ 2
UBA52-204	ENST00000595158	C2orf16	Q68DN1	1984 aa		27.53	■■■□□ 2
UBA52-204	ENST00000595158	TISP43	B9A030	160 aa		27.52	■■■□□ 2
UBA52-204	ENST00000595158	ADAM12	O43184	909 aa		27.52	■■■□□ 2
UBA52-204	ENST00000595158	TRAPPC3	O43617	180 aa		27.52	■■■□□ 2
UBA52-204	ENST00000595158	SPATA31D3	P0C874	917 aa		27.52	■■■□□ 2
UBA52-204	ENST00000595158	SP100	P23497	879 aa	Predicted RBP	27.52	■■■□□ 2
UBA52-204	ENST00000595158	TKT	P29401	623 aa	Known RBP	27.52	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms