RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 ZNF568Q3ZCX4 644 aa14.59□□□□□ -0.07
VMP1-217ENST00000593168 EEF1DP3Q658K8 133 aa14.59□□□□□ -0.07
VMP1-217ENST00000593168 PPP2R2DQ66LE6 453 aa14.59□□□□□ -0.07
VMP1-217ENST00000593168 ZBTB33Q86T24 672 aa14.59□□□□□ -0.07
VMP1-217ENST00000593168 BRSK2Q8IWQ3 736 aa14.59□□□□□ -0.07
VMP1-217ENST00000593168 OR8K1Q8NGG5 319 aa14.59□□□□□ -0.07
VMP1-217ENST00000593168 CCDC127Q96BQ5 260 aa14.59□□□□□ -0.07
VMP1-217ENST00000593168 SCLYQ96I15 445 aa14.59□□□□□ -0.07
VMP1-217ENST00000593168 CRACR2AQ9BSW2 395 aa14.59□□□□□ -0.07
VMP1-217ENST00000593168 CDT1Q9H211 546 aa14.59□□□□□ -0.07
VMP1-217ENST00000593168 FBXL5Q9UKA1 691 aa14.59□□□□□ -0.07
VMP1-217ENST00000593168 CPSF3Q9UKF6 684 aaKnown RBP14.59□□□□□ -0.07
VMP1-217ENST00000593168 GINS2Q9Y248 185 aa14.59□□□□□ -0.07
VMP1-217ENST00000593168 LRRIQ3A6PVS8 624 aaPredicted RBP14.58□□□□□ -0.08
VMP1-217ENST00000593168 RNF225M0QZC1 329 aaPredicted RBP14.58□□□□□ -0.08
VMP1-217ENST00000593168 RFXAPO00287 272 aa14.58□□□□□ -0.08
VMP1-217ENST00000593168 PON1P27169 355 aa14.58□□□□□ -0.08
VMP1-217ENST00000593168 CCZ1BP86790 482 aa14.58□□□□□ -0.08
VMP1-217ENST00000593168 CCZ1P86791 482 aaPredicted RBP14.58□□□□□ -0.08
VMP1-217ENST00000593168 MYL7Q01449 175 aa14.58□□□□□ -0.08
VMP1-217ENST00000593168 PTK7Q13308 1070 aa14.58□□□□□ -0.08
VMP1-217ENST00000593168 PTGISQ16647 500 aa14.58□□□□□ -0.08
VMP1-217ENST00000593168 CBWD6Q4V339 395 aa14.58□□□□□ -0.08
VMP1-217ENST00000593168 CBWD3Q5JTY5 395 aa14.58□□□□□ -0.08
VMP1-217ENST00000593168 CBWD5Q5RIA9 395 aa14.58□□□□□ -0.08
VMP1-217ENST00000593168 KRT39Q6A163 491 aa14.58□□□□□ -0.08
VMP1-217ENST00000593168 DPY19L2P1Q6NXN4 242 aa14.58□□□□□ -0.08
VMP1-217ENST00000593168 CATSPER4Q7RTX7 472 aa14.58□□□□□ -0.08
VMP1-217ENST00000593168 APBB1IPQ7Z5R6 666 aaPredicted RBP14.58□□□□□ -0.08
VMP1-217ENST00000593168 ZSCAN30Q86W11 494 aa14.58□□□□□ -0.08
VMP1-217ENST00000593168 EHBP1Q8NDI1 1231 aa14.58□□□□□ -0.08
VMP1-217ENST00000593168 ZNF397Q8NF99 534 aaPredicted RBP14.58□□□□□ -0.08
VMP1-217ENST00000593168 FNBP1Q96RU3 617 aa14.58□□□□□ -0.08
VMP1-217ENST00000593168 ADPGKQ9BRR6 497 aa14.58□□□□□ -0.08
VMP1-217ENST00000593168 LSM14BQ9BX40 385 aaKnown RBP14.58□□□□□ -0.08
VMP1-217ENST00000593168 TMEM117Q9H0C3 514 aa14.58□□□□□ -0.08
VMP1-217ENST00000593168 PDZD7Q9H5P4 517 aa14.58□□□□□ -0.08
VMP1-217ENST00000593168 TMEM8AQ9HCN3 771 aa14.58□□□□□ -0.08
VMP1-217ENST00000593168 FAM207AQ9NSI2 230 aaPredicted RBP14.58□□□□□ -0.08
VMP1-217ENST00000593168 AGPAT5Q9NUQ2 364 aa14.58□□□□□ -0.08
VMP1-217ENST00000593168 RBAKQ9NYW8 714 aaPredicted RBP14.58□□□□□ -0.08
VMP1-217ENST00000593168 COQ4Q9Y3A0 265 aa14.58□□□□□ -0.08
VMP1-217ENST00000593168 DAAM1Q9Y4D1 1078 aa14.58□□□□□ -0.08
VMP1-217ENST00000593168 PCDHA11Q9Y5I1 949 aa14.58□□□□□ -0.08
VMP1-217ENST00000593168 TRPV2Q9Y5S1 764 aa14.58□□□□□ -0.08
VMP1-217ENST00000593168 SLC4A7Q9Y6M7 1214 aa14.58□□□□□ -0.08
VMP1-217ENST00000593168 ZBBXA8MT70 800 aa14.57□□□□□ -0.08
VMP1-217ENST00000593168 NOL4O94818 638 aa14.57□□□□□ -0.08
VMP1-217ENST00000593168 HARSP12081 509 aaKnown RBP14.57□□□□□ -0.08
VMP1-217ENST00000593168 SKILP12757 684 aa14.57□□□□□ -0.08
VMP1-217ENST00000593168 SLC9A1P19634 815 aa14.57□□□□□ -0.08
VMP1-217ENST00000593168 FECHP22830 423 aa14.57□□□□□ -0.08
VMP1-217ENST00000593168 HOXA11P31270 313 aaPredicted RBP14.57□□□□□ -0.08
VMP1-217ENST00000593168 GCLMP48507 274 aa14.57□□□□□ -0.08
VMP1-217ENST00000593168 MXI1P50539 228 aa14.57□□□□□ -0.08
VMP1-217ENST00000593168 KCNQ1P51787 676 aa14.57□□□□□ -0.08
VMP1-217ENST00000593168 AP3M2P53677 418 aa14.57□□□□□ -0.08
VMP1-217ENST00000593168 GOLGA8FQ08AF8 430 aa14.57□□□□□ -0.08
VMP1-217ENST00000593168 GOLGA8DPQ0D2H9 430 aa14.57□□□□□ -0.08
VMP1-217ENST00000593168 DCAF4L1Q3SXM0 396 aa14.57□□□□□ -0.08
VMP1-217ENST00000593168 ZBTB41Q5SVQ8 909 aa14.57□□□□□ -0.08
VMP1-217ENST00000593168 KLHDC7AQ5VTJ3 777 aa14.57□□□□□ -0.08
VMP1-217ENST00000593168 FAM122AQ96E09 287 aa14.57□□□□□ -0.08
VMP1-217ENST00000593168 DNAJC7Q99615 494 aa14.57□□□□□ -0.08
VMP1-217ENST00000593168 NAA15Q9BXJ9 866 aaKnown RBP14.57□□□□□ -0.08
VMP1-217ENST00000593168 NUCKS1Q9H1E3 243 aaKnown RBP14.57□□□□□ -0.08
VMP1-217ENST00000593168 GANQ9H2C0 597 aa14.57□□□□□ -0.08
VMP1-217ENST00000593168 TSPYL2Q9H2G4 693 aaPredicted RBP14.57□□□□□ -0.08
VMP1-217ENST00000593168 ABHD10Q9NUJ1 306 aa14.57□□□□□ -0.08
VMP1-217ENST00000593168 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.57□□□□□ -0.08
VMP1-217ENST00000593168 GCNT4Q9P109 453 aa14.57□□□□□ -0.08
VMP1-217ENST00000593168 CEP72Q9P209 647 aa14.57□□□□□ -0.08
VMP1-217ENST00000593168 CDY2AQ9Y6F7 541 aa14.57□□□□□ -0.08
VMP1-217ENST00000593168 EPHB6O15197 1021 aa14.56□□□□□ -0.08
VMP1-217ENST00000593168 CAND2O75155 1236 aa14.56□□□□□ -0.08
VMP1-217ENST00000593168 CLTAP09496 248 aa14.56□□□□□ -0.08
VMP1-217ENST00000593168 DLATP10515 647 aaKnown RBP14.56□□□□□ -0.08
VMP1-217ENST00000593168 HNRNPH3P31942 346 aaKnown RBP14.56□□□□□ -0.08
VMP1-217ENST00000593168 MGAT3Q09327 533 aa14.56□□□□□ -0.08
VMP1-217ENST00000593168 TSR1Q2NL82 804 aaKnown RBP14.56□□□□□ -0.08
VMP1-217ENST00000593168 EPC2Q52LR7 807 aa14.56□□□□□ -0.08
VMP1-217ENST00000593168 NOTUMQ6P988 496 aa14.56□□□□□ -0.08
VMP1-217ENST00000593168 TRIM65Q6PJ69 517 aa14.56□□□□□ -0.08
VMP1-217ENST00000593168 C15orf39Q6ZRI6 1047 aa14.56□□□□□ -0.08
VMP1-217ENST00000593168 SV2AQ7L0J3 742 aa14.56□□□□□ -0.08
VMP1-217ENST00000593168 CACNA2D4Q7Z3S7 1137 aa14.56□□□□□ -0.08
VMP1-217ENST00000593168 CDR2LQ86X02 465 aaPredicted RBP14.56□□□□□ -0.08
VMP1-217ENST00000593168 TMEM139Q8IV31 216 aa14.56□□□□□ -0.08
VMP1-217ENST00000593168 THNSL1Q8IYQ7 743 aa14.56□□□□□ -0.08
VMP1-217ENST00000593168 RPUSD2Q8IZ73 545 aaKnown RBP14.56□□□□□ -0.08
VMP1-217ENST00000593168 LMO3Q8TAP4 145 aa14.56□□□□□ -0.08
VMP1-217ENST00000593168 TMEM40Q8WWA1 233 aa14.56□□□□□ -0.08
VMP1-217ENST00000593168 BAP1Q92560 729 aa14.56□□□□□ -0.08
VMP1-217ENST00000593168 WNT8BQ93098 351 aa14.56□□□□□ -0.08
VMP1-217ENST00000593168 CPB2Q96IY4 423 aa14.56□□□□□ -0.08
VMP1-217ENST00000593168 POP1Q99575 1024 aaKnown RBP14.56□□□□□ -0.08
VMP1-217ENST00000593168 CGRRF1Q99675 332 aa14.56□□□□□ -0.08
VMP1-217ENST00000593168 BAG1Q99933 345 aaPredicted RBP14.56□□□□□ -0.08
VMP1-217ENST00000593168 PDE11AQ9HCR9 933 aa14.56□□□□□ -0.08
VMP1-217ENST00000593168 SIX2Q9NPC8 291 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms