RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 PAAF1Q9BRP4 392 aa10.81□□□□□ -0.68
TPM4-216ENST00000592822 C11orf84Q9BUA3 381 aaPredicted RBP10.81□□□□□ -0.68
TPM4-216ENST00000592822 MTMR10Q9NXD2 777 aa10.81□□□□□ -0.68
TPM4-216ENST00000592822 SPG21Q9NZD8 308 aa10.81□□□□□ -0.68
TPM4-216ENST00000592822 REV3LO60673 3130 aa10.8□□□□□ -0.68
TPM4-216ENST00000592822 ATG2AQ2TAZ0 1938 aa10.8□□□□□ -0.68
TPM4-216ENST00000592822 CASTOR2A6NHX0 329 aa10.8□□□□□ -0.68
TPM4-216ENST00000592822 ZNF233A6NK53 670 aa10.8□□□□□ -0.68
TPM4-216ENST00000592822 GRM6O15303 877 aa10.8□□□□□ -0.68
TPM4-216ENST00000592822 CALUO43852 315 aaPredicted RBP10.8□□□□□ -0.68
TPM4-216ENST00000592822 ITGB1P05556 798 aa10.8□□□□□ -0.68
TPM4-216ENST00000592822 NFICP08651 508 aa10.8□□□□□ -0.68
TPM4-216ENST00000592822 IGFBP6P24592 240 aaPredicted RBP10.8□□□□□ -0.68
TPM4-216ENST00000592822 DNAJB1P25685 340 aa10.8□□□□□ -0.68
TPM4-216ENST00000592822 OR1G1P47890 313 aa10.8□□□□□ -0.68
TPM4-216ENST00000592822 PMS1P54277 932 aaKnown RBP10.8□□□□□ -0.68
TPM4-216ENST00000592822 PLCB3Q01970 1234 aa10.8□□□□□ -0.68
TPM4-216ENST00000592822 ADGRE1Q14246 886 aa10.8□□□□□ -0.68
TPM4-216ENST00000592822 MYBPC2Q14324 1141 aa10.8□□□□□ -0.68
TPM4-216ENST00000592822 SNRNP35Q16560 246 aaKnown RBP10.8□□□□□ -0.68
TPM4-216ENST00000592822 NFIL3Q16649 462 aa10.8□□□□□ -0.68
TPM4-216ENST00000592822 JADE1Q6IE81 842 aa10.8□□□□□ -0.68
TPM4-216ENST00000592822 CD302Q8IX05 232 aa10.8□□□□□ -0.68
TPM4-216ENST00000592822 SPPL3Q8TCT6 385 aa10.8□□□□□ -0.68
TPM4-216ENST00000592822 GDPD5Q8WTR4 605 aa10.8□□□□□ -0.68
TPM4-216ENST00000592822 CDX2Q99626 313 aaPredicted RBP10.8□□□□□ -0.68
TPM4-216ENST00000592822 VN1R3Q9BXE9 311 aa10.8□□□□□ -0.68
TPM4-216ENST00000592822 ASB7Q9H672 318 aa10.8□□□□□ -0.68
TPM4-216ENST00000592822 GOLGA2P5Q9HBQ8 144 aa10.8□□□□□ -0.68
TPM4-216ENST00000592822 KIAA1586Q9HCI6 787 aa10.8□□□□□ -0.68
TPM4-216ENST00000592822 ALG13Q9NP73 1137 aaKnown RBP10.8□□□□□ -0.68
TPM4-216ENST00000592822 MARCH5Q9NX47 278 aa10.8□□□□□ -0.68
TPM4-216ENST00000592822 RBAKQ9NYW8 714 aaPredicted RBP10.8□□□□□ -0.68
TPM4-216ENST00000592822 TUBGCP4Q9UGJ1 667 aa10.8□□□□□ -0.68
TPM4-216ENST00000592822 FAN1Q9Y2M0 1017 aa10.8□□□□□ -0.68
TPM4-216ENST00000592822 PRG3Q9Y2Y8 225 aaPredicted RBP10.8□□□□□ -0.68
TPM4-216ENST00000592822 TRIM49BA6NDI0 452 aa10.79□□□□□ -0.68
TPM4-216ENST00000592822 PSMA7O14818 248 aa10.79□□□□□ -0.68
TPM4-216ENST00000592822 EXOC3O60645 756 aa10.79□□□□□ -0.68
TPM4-216ENST00000592822 IL18RAPO95256 599 aa10.79□□□□□ -0.68
TPM4-216ENST00000592822 EFEMP2O95967 443 aa10.79□□□□□ -0.68
TPM4-216ENST00000592822 PPM1AP35813 382 aa10.79□□□□□ -0.68
TPM4-216ENST00000592822 PPP1R2P41236 205 aa10.79□□□□□ -0.68
TPM4-216ENST00000592822 CASP4P49662 377 aa10.79□□□□□ -0.68
TPM4-216ENST00000592822 CLCNKBP51801 687 aa10.79□□□□□ -0.68
TPM4-216ENST00000592822 CAMK1Q14012 370 aa10.79□□□□□ -0.68
TPM4-216ENST00000592822 TMEM132DQ14C87 1099 aa10.79□□□□□ -0.68
TPM4-216ENST00000592822 UPP1Q16831 310 aa10.79□□□□□ -0.68
TPM4-216ENST00000592822 EDRF1Q3B7T1 1238 aa10.79□□□□□ -0.68
TPM4-216ENST00000592822 ANKRD40Q6AI12 368 aa10.79□□□□□ -0.68
TPM4-216ENST00000592822 CD300LGQ6UXG3 332 aa10.79□□□□□ -0.68
TPM4-216ENST00000592822 EFCAB13Q8IY85 973 aa10.79□□□□□ -0.68
TPM4-216ENST00000592822 RDH13Q8NBN7 331 aa10.79□□□□□ -0.68
TPM4-216ENST00000592822 MYLIPQ8WY64 445 aa10.79□□□□□ -0.68
TPM4-216ENST00000592822 KIF12Q96FN5 646 aa10.79□□□□□ -0.68
TPM4-216ENST00000592822 DHTKD1Q96HY7 919 aaPredicted RBP10.79□□□□□ -0.68
TPM4-216ENST00000592822 IGSF21Q96ID5 467 aa10.79□□□□□ -0.68
TPM4-216ENST00000592822 FAM84AQ96KN4 292 aa10.79□□□□□ -0.68
TPM4-216ENST00000592822 TSPAN18Q96SJ8 248 aa10.79□□□□□ -0.68
TPM4-216ENST00000592822 COLEC11Q9BWP8 271 aa10.79□□□□□ -0.68
TPM4-216ENST00000592822 GZF1Q9H116 711 aaPredicted RBP10.79□□□□□ -0.68
TPM4-216ENST00000592822 PDE11AQ9HCR9 933 aa10.79□□□□□ -0.68
TPM4-216ENST00000592822 SLC38A7Q9NVC3 462 aa10.79□□□□□ -0.68
TPM4-216ENST00000592822 TMEM63CQ9P1W3 806 aa10.79□□□□□ -0.68
TPM4-216ENST00000592822 UBQLN1Q9UMX0 589 aaKnown RBP10.79□□□□□ -0.68
TPM4-216ENST00000592822 DERAQ9Y315 318 aa10.79□□□□□ -0.68
TPM4-216ENST00000592822 CARNS1A5YM72 827 aa10.78□□□□□ -0.68
TPM4-216ENST00000592822 KIF4AO95239 1232 aa10.78□□□□□ -0.68
TPM4-216ENST00000592822 POU3F3P20264 500 aaPredicted RBP10.78□□□□□ -0.68
TPM4-216ENST00000592822 CYP3A5P20815 502 aa10.78□□□□□ -0.68
TPM4-216ENST00000592822 NR2F2P24468 414 aa10.78□□□□□ -0.68
TPM4-216ENST00000592822 CCNE1P24864 410 aa10.78□□□□□ -0.68
TPM4-216ENST00000592822 RPL13P26373 211 aaKnown RBP10.78□□□□□ -0.68
TPM4-216ENST00000592822 GUCY2FP51841 1108 aa10.78□□□□□ -0.68
TPM4-216ENST00000592822 NLRP12P59046 1061 aa10.78□□□□□ -0.68
TPM4-216ENST00000592822 KRT17Q04695 432 aa10.78□□□□□ -0.68
TPM4-216ENST00000592822 UBE3AQ05086 875 aa10.78□□□□□ -0.68
TPM4-216ENST00000592822 LRRC63Q05C16 580 aa10.78□□□□□ -0.68
TPM4-216ENST00000592822 CYP24A1Q07973 514 aa10.78□□□□□ -0.68
TPM4-216ENST00000592822 STIM1Q13586 685 aa10.78□□□□□ -0.68
TPM4-216ENST00000592822 HSP90AA2PQ14568 343 aaPredicted RBP10.78□□□□□ -0.68
TPM4-216ENST00000592822 PSMD6Q15008 389 aa10.78□□□□□ -0.68
TPM4-216ENST00000592822 CCDC183Q5T5S1 534 aa10.78□□□□□ -0.68
TPM4-216ENST00000592822 SPATA1Q5VX52 437 aa10.78□□□□□ -0.68
TPM4-216ENST00000592822 CEP135Q66GS9 1140 aa10.78□□□□□ -0.68
TPM4-216ENST00000592822 KLHL10Q6JEL2 608 aa10.78□□□□□ -0.68
TPM4-216ENST00000592822 DCLRE1AQ6PJP8 1040 aa10.78□□□□□ -0.68
TPM4-216ENST00000592822 DDX53Q86TM3 631 aaKnown RBP10.78□□□□□ -0.68
TPM4-216ENST00000592822 ZC3H3Q8IXZ2 948 aaKnown RBP10.78□□□□□ -0.68
TPM4-216ENST00000592822 MLKLQ8NB16 471 aa10.78□□□□□ -0.68
TPM4-216ENST00000592822 C3orf58Q8NDZ4 430 aa10.78□□□□□ -0.68
TPM4-216ENST00000592822 PLEKHO2Q8TD55 490 aa10.78□□□□□ -0.68
TPM4-216ENST00000592822 POF1BQ8WVV4 589 aa10.78□□□□□ -0.68
TPM4-216ENST00000592822 NELFBQ8WX92 580 aa10.78□□□□□ -0.68
TPM4-216ENST00000592822 EEF2KMTQ96G04 330 aa10.78□□□□□ -0.68
TPM4-216ENST00000592822 TMEM169Q96HH4 297 aa10.78□□□□□ -0.68
TPM4-216ENST00000592822 MFSD14AQ96MC6 490 aa10.78□□□□□ -0.68
TPM4-216ENST00000592822 UROC1Q96N76 676 aa10.78□□□□□ -0.68
TPM4-216ENST00000592822 DUSP9Q99956 384 aaKnown RBP10.78□□□□□ -0.68
TPM4-216ENST00000592822 CTNND2Q9UQB3 1225 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms