RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 SIX5Q8N196 739 aa20.69■□□□□ 0.9
CCDC43-205ENST00000592333 FLCNQ8NFG4 579 aa20.69■□□□□ 0.9
CCDC43-205ENST00000592333 MMTAG2Q9BU76 263 aaKnown RBP20.69■□□□□ 0.9
CCDC43-205ENST00000592333 CDT1Q9H211 546 aa20.69■□□□□ 0.9
CCDC43-205ENST00000592333 CXCL16Q9H2A7 254 aa20.69■□□□□ 0.9
CCDC43-205ENST00000592333 SLC2A4RGQ9NR83 387 aa20.69■□□□□ 0.9
CCDC43-205ENST00000592333 USP20Q9Y2K6 914 aa20.69■□□□□ 0.9
CCDC43-205ENST00000592333 DOCK8Q8NF50 2099 aa20.68■□□□□ 0.9
CCDC43-205ENST00000592333 USP34Q70CQ2 3546 aa20.68■□□□□ 0.9
CCDC43-205ENST00000592333 MCM2P49736 904 aa20.68■□□□□ 0.9
CCDC43-205ENST00000592333 SMTNP53814 917 aa20.68■□□□□ 0.9
CCDC43-205ENST00000592333 MAPK7Q13164 816 aa20.68■□□□□ 0.9
CCDC43-205ENST00000592333 HTR4Q13639 388 aa20.68■□□□□ 0.9
CCDC43-205ENST00000592333 IL17AQ16552 155 aa20.68■□□□□ 0.9
CCDC43-205ENST00000592333 ZNF568Q3ZCX4 644 aa20.68■□□□□ 0.9
CCDC43-205ENST00000592333 PHLDB3Q6NSJ2 640 aa20.68■□□□□ 0.9
CCDC43-205ENST00000592333 MPZL3Q6UWV2 235 aa20.68■□□□□ 0.9
CCDC43-205ENST00000592333 CCDC105Q8IYK2 499 aa20.68■□□□□ 0.9
CCDC43-205ENST00000592333 SYT2Q8N9I0 419 aaPredicted RBP20.68■□□□□ 0.9
CCDC43-205ENST00000592333 ACAP3Q96P50 834 aa20.68■□□□□ 0.9
CCDC43-205ENST00000592333 CDH7Q9ULB5 785 aa20.68■□□□□ 0.9
CCDC43-205ENST00000592333 KCNH3Q9ULD8 1083 aa20.68■□□□□ 0.9
CCDC43-205ENST00000592333 H0YCG3 227 aa20.67■□□□□ 0.9
CCDC43-205ENST00000592333 SYN3O14994 580 aa20.67■□□□□ 0.9
CCDC43-205ENST00000592333 GFRA3O60609 400 aa20.67■□□□□ 0.9
CCDC43-205ENST00000592333 TOM1L1O75674 476 aa20.67■□□□□ 0.9
CCDC43-205ENST00000592333 OR1D2P34982 312 aa20.67■□□□□ 0.9
CCDC43-205ENST00000592333 STRN3Q13033 797 aa20.67■□□□□ 0.9
CCDC43-205ENST00000592333 AXDND1Q5T1B0 1012 aaPredicted RBP20.67■□□□□ 0.9
CCDC43-205ENST00000592333 CD300LGQ6UXG3 332 aa20.67■□□□□ 0.9
CCDC43-205ENST00000592333 ZPBP2Q6X784 338 aa20.67■□□□□ 0.9
CCDC43-205ENST00000592333 MTSS1LQ765P7 747 aa20.67■□□□□ 0.9
CCDC43-205ENST00000592333 GET4Q7L5D6 327 aaPredicted RBP20.67■□□□□ 0.9
CCDC43-205ENST00000592333 AK8Q96MA6 479 aa20.67■□□□□ 0.9
CCDC43-205ENST00000592333 RUSC1Q9BVN2 902 aa20.67■□□□□ 0.9
CCDC43-205ENST00000592333 POLD4Q9HCU8 107 aa20.67■□□□□ 0.9
CCDC43-205ENST00000592333 CNTN3Q9P232 1028 aa20.67■□□□□ 0.9
CCDC43-205ENST00000592333 ABLIM1O14639 778 aa20.66■□□□□ 0.9
CCDC43-205ENST00000592333 NARSO43776 548 aaKnown RBP20.66■□□□□ 0.9
CCDC43-205ENST00000592333 MYBP10242 640 aa20.66■□□□□ 0.9
CCDC43-205ENST00000592333 PLS3P13797 630 aa20.66■□□□□ 0.9
CCDC43-205ENST00000592333 GLRA4Q5JXX5 417 aa20.66■□□□□ 0.9
CCDC43-205ENST00000592333 SLC8B1Q6J4K2 584 aa20.66■□□□□ 0.9
CCDC43-205ENST00000592333 TAS1R3Q7RTX0 852 aa20.66■□□□□ 0.9
CCDC43-205ENST00000592333 GRASPQ7Z6J2 395 aaPredicted RBP20.66■□□□□ 0.9
CCDC43-205ENST00000592333 RSAD2Q8WXG1 361 aa20.66■□□□□ 0.9
CCDC43-205ENST00000592333 SNX27Q96L92 541 aa20.66■□□□□ 0.9
CCDC43-205ENST00000592333 TCHPQ9BT92 498 aa20.66■□□□□ 0.9
CCDC43-205ENST00000592333 TARS2Q9BW92 718 aaKnown RBP20.66■□□□□ 0.9
CCDC43-205ENST00000592333 AVENQ9NQS1 362 aaPredicted RBP20.66■□□□□ 0.9
CCDC43-205ENST00000592333 FAM86C1Q9NVL1 165 aa20.66■□□□□ 0.9
CCDC43-205ENST00000592333 MAFFQ9ULX9 164 aa20.66■□□□□ 0.9
CCDC43-205ENST00000592333 VWA8A3KMH1 1905 aa20.65■□□□□ 0.9
CCDC43-205ENST00000592333 PP2D1A8MPX8 630 aa20.65■□□□□ 0.9
CCDC43-205ENST00000592333 CFHP08603 1231 aa20.65■□□□□ 0.9
CCDC43-205ENST00000592333 KCNA4P22459 653 aa20.65■□□□□ 0.9
CCDC43-205ENST00000592333 CDC25AP30304 524 aa20.65■□□□□ 0.9
CCDC43-205ENST00000592333 MCTP1Q6DN14 999 aa20.65■□□□□ 0.9
CCDC43-205ENST00000592333 ZNF461Q8TAF7 563 aa20.65■□□□□ 0.9
CCDC43-205ENST00000592333 UPF2Q9HAU5 1272 aaKnown RBP20.65■□□□□ 0.9
CCDC43-205ENST00000592333 LARSQ9P2J5 1176 aaKnown RBP20.65■□□□□ 0.9
CCDC43-205ENST00000592333 CDY1Q9Y6F8 540 aa20.65■□□□□ 0.9
CCDC43-205ENST00000592333 ZFHX2Q9C0A1 2572 aaPredicted RBP20.65■□□□□ 0.9
CCDC43-205ENST00000592333 H7C4K7 107 aa20.64■□□□□ 0.89
CCDC43-205ENST00000592333 ADAM12O43184 909 aa20.64■□□□□ 0.89
CCDC43-205ENST00000592333 KCNK18Q7Z418 384 aa20.64■□□□□ 0.89
CCDC43-205ENST00000592333 CEP120Q8N960 986 aa20.64■□□□□ 0.89
CCDC43-205ENST00000592333 DTWD2Q8NBA8 298 aa20.64■□□□□ 0.89
CCDC43-205ENST00000592333 C3orf58Q8NDZ4 430 aa20.64■□□□□ 0.89
CCDC43-205ENST00000592333 TMEM161BQ8NDZ6 487 aa20.64■□□□□ 0.89
CCDC43-205ENST00000592333 SLC7A14Q8TBB6 771 aa20.64■□□□□ 0.89
CCDC43-205ENST00000592333 FGF13Q92913 245 aa20.64■□□□□ 0.89
CCDC43-205ENST00000592333 SHDQ96IW2 340 aa20.64■□□□□ 0.89
CCDC43-205ENST00000592333 TMX3Q96JJ7 454 aa20.64■□□□□ 0.89
CCDC43-205ENST00000592333 TSPAN18Q96SJ8 248 aa20.64■□□□□ 0.89
CCDC43-205ENST00000592333 PLEKHA5Q9HAU0 1116 aa20.64■□□□□ 0.89
CCDC43-205ENST00000592333 NUMBLQ9Y6R0 609 aa20.64■□□□□ 0.89
CCDC43-205ENST00000592333 ARHGEF37A1IGU5 675 aa20.63■□□□□ 0.89
CCDC43-205ENST00000592333 KRBA1A5PL33 1030 aa20.63■□□□□ 0.89
CCDC43-205ENST00000592333 H3BQV1 296 aa20.63■□□□□ 0.89
CCDC43-205ENST00000592333 PODXLO00592 558 aa20.63■□□□□ 0.89
CCDC43-205ENST00000592333 SLC16A4O15374 487 aa20.63■□□□□ 0.89
CCDC43-205ENST00000592333 PI15O43692 258 aa20.63■□□□□ 0.89
CCDC43-205ENST00000592333 ABLIM3O94929 683 aa20.63■□□□□ 0.89
CCDC43-205ENST00000592333 BMP15O95972 392 aa20.63■□□□□ 0.89
CCDC43-205ENST00000592333 TKTP29401 623 aaKnown RBP20.63■□□□□ 0.89
CCDC43-205ENST00000592333 ABCD1P33897 745 aa20.63■□□□□ 0.89
CCDC43-205ENST00000592333 SLC12A3P55017 1021 aa20.63■□□□□ 0.89
CCDC43-205ENST00000592333 SOX4Q06945 474 aaPredicted RBP20.63■□□□□ 0.89
CCDC43-205ENST00000592333 MRPL58Q14197 206 aaKnown RBP20.63■□□□□ 0.89
CCDC43-205ENST00000592333 KYAT1Q16773 422 aa20.63■□□□□ 0.89
CCDC43-205ENST00000592333 CDK5RAP3Q96JB5 506 aa20.63■□□□□ 0.89
CCDC43-205ENST00000592333 SEMA4AQ9H3S1 761 aa20.63■□□□□ 0.89
CCDC43-205ENST00000592333 ODF2LQ9ULJ1 636 aa20.63■□□□□ 0.89
CCDC43-205ENST00000592333 CCL16O15467 120 aa20.62■□□□□ 0.89
CCDC43-205ENST00000592333 CLDN3O15551 220 aa20.62■□□□□ 0.89
CCDC43-205ENST00000592333 TBC1D4O60343 1298 aa20.62■□□□□ 0.89
CCDC43-205ENST00000592333 MICAL2O94851 1124 aa20.62■□□□□ 0.89
CCDC43-205ENST00000592333 MAPTP10636 758 aaKnown RBP20.62■□□□□ 0.89
CCDC43-205ENST00000592333 ATF2P15336 505 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms