RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 PPP1R37O75864 691 aa29.73■■■□□ 2.35
SMAD4-213ENST00000591914 ELAVL2Q12926 359 aaKnown RBP29.73■■■□□ 2.35
SMAD4-213ENST00000591914 KYAT1Q16773 422 aa29.73■■■□□ 2.35
SMAD4-213ENST00000591914 RTP2Q5QGT7 225 aa29.73■■■□□ 2.35
SMAD4-213ENST00000591914 RIN2Q8WYP3 895 aaPredicted RBP29.73■■■□□ 2.35
SMAD4-213ENST00000591914 HVCN1Q96D96 273 aa29.73■■■□□ 2.35
SMAD4-213ENST00000591914 STRA6Q9BX79 667 aa29.73■■■□□ 2.35
SMAD4-213ENST00000591914 CUEDC2Q9H467 287 aa29.73■■■□□ 2.35
SMAD4-213ENST00000591914 FNIP2Q9P278 1114 aa29.73■■■□□ 2.35
SMAD4-213ENST00000591914 ZDHHC9Q9Y397 364 aa29.73■■■□□ 2.35
SMAD4-213ENST00000591914 PDCD11Q14690 1871 aaKnown RBP29.73■■■□□ 2.35
SMAD4-213ENST00000591914 B3GAT3O94766 335 aa29.72■■■□□ 2.35
SMAD4-213ENST00000591914 IGFBP6P24592 240 aaPredicted RBP29.72■■■□□ 2.35
SMAD4-213ENST00000591914 CREMQ03060 361 aa29.72■■■□□ 2.35
SMAD4-213ENST00000591914 FAM171A1Q5VUB5 890 aa29.72■■■□□ 2.35
SMAD4-213ENST00000591914 CD300LGQ6UXG3 332 aa29.72■■■□□ 2.35
SMAD4-213ENST00000591914 DDX27Q96GQ7 796 aaKnown RBP29.72■■■□□ 2.35
SMAD4-213ENST00000591914 TTPALQ9BTX7 342 aa29.72■■■□□ 2.35
SMAD4-213ENST00000591914 TNMDQ9H2S6 317 aa29.72■■■□□ 2.35
SMAD4-213ENST00000591914 PLEKHA5Q9HAU0 1116 aa29.72■■■□□ 2.35
SMAD4-213ENST00000591914 OLFML3Q9NRN5 406 aa29.72■■■□□ 2.35
SMAD4-213ENST00000591914 KBTBD4Q9NVX7 518 aa29.72■■■□□ 2.35
SMAD4-213ENST00000591914 RCOR1Q9UKL0 485 aa29.72■■■□□ 2.35
SMAD4-213ENST00000591914 PCDHA7Q9UN72 937 aa29.72■■■□□ 2.35
SMAD4-213ENST00000591914 LOC730098B7Z3J9 87 aa29.71■■■□□ 2.35
SMAD4-213ENST00000591914 OGTO15294 1046 aa29.71■■■□□ 2.35
SMAD4-213ENST00000591914 C1RP00736 705 aa29.71■■■□□ 2.35
SMAD4-213ENST00000591914 CXCL8P10145 99 aa29.71■■■□□ 2.35
SMAD4-213ENST00000591914 ME1P48163 572 aa29.71■■■□□ 2.35
SMAD4-213ENST00000591914 CES5AQ6NT32 575 aa29.71■■■□□ 2.35
SMAD4-213ENST00000591914 C12orf76Q8N812 135 aaPredicted RBP29.71■■■□□ 2.35
SMAD4-213ENST00000591914 C3orf58Q8NDZ4 430 aa29.71■■■□□ 2.35
SMAD4-213ENST00000591914 PIK3R5Q8WYR1 880 aa29.71■■■□□ 2.35
SMAD4-213ENST00000591914 MRPL44Q9H9J2 332 aaKnown RBP29.71■■■□□ 2.35
SMAD4-213ENST00000591914 PLXNA3P51805 1871 aa29.71■■■□□ 2.35
SMAD4-213ENST00000591914 TTC26A0AVF1 554 aa29.7■■■□□ 2.35
SMAD4-213ENST00000591914 IDEP14735 1019 aa29.7■■■□□ 2.35
SMAD4-213ENST00000591914 TNFSF9P41273 254 aa29.7■■■□□ 2.35
SMAD4-213ENST00000591914 RARS2Q5T160 578 aaKnown RBP29.7■■■□□ 2.35
SMAD4-213ENST00000591914 IQUBQ8NA54 791 aa29.7■■■□□ 2.35
SMAD4-213ENST00000591914 C18orf25Q96B23 403 aaPredicted RBP29.7■■■□□ 2.35
SMAD4-213ENST00000591914 SFXN1Q9H9B4 322 aa29.7■■■□□ 2.35
SMAD4-213ENST00000591914 CDH22Q9UJ99 828 aa29.7■■■□□ 2.35
SMAD4-213ENST00000591914 STYXL1Q9Y6J8 313 aa29.7■■■□□ 2.35
SMAD4-213ENST00000591914 VWA8A3KMH1 1905 aa29.69■■■□□ 2.34
SMAD4-213ENST00000591914 ANKRD63C9JTQ0 380 aa29.69■■■□□ 2.34
SMAD4-213ENST00000591914 GLUD1P00367 558 aa29.69■■■□□ 2.34
SMAD4-213ENST00000591914 HERC4Q5GLZ8 1057 aaPredicted RBP29.69■■■□□ 2.34
SMAD4-213ENST00000591914 ZBTB41Q5SVQ8 909 aa29.69■■■□□ 2.34
SMAD4-213ENST00000591914 KANK3Q6NY19 840 aa29.69■■■□□ 2.34
SMAD4-213ENST00000591914 PRSS55Q6UWB4 352 aaPredicted RBP29.69■■■□□ 2.34
SMAD4-213ENST00000591914 PDZRN4Q6ZMN7 1036 aaPredicted RBP29.69■■■□□ 2.34
SMAD4-213ENST00000591914 DHX58Q96C10 678 aa29.69■■■□□ 2.34
SMAD4-213ENST00000591914 NECTIN4Q96NY8 510 aa29.69■■■□□ 2.34
SMAD4-213ENST00000591914 MSTO1Q9BUK6 570 aa29.69■■■□□ 2.34
SMAD4-213ENST00000591914 LRRC27Q9C0I9 530 aa29.69■■■□□ 2.34
SMAD4-213ENST00000591914 PANK4Q9NVE7 773 aa29.69■■■□□ 2.34
SMAD4-213ENST00000591914 PI4K2BG5E9Z4 385 aa29.68■■■□□ 2.34
SMAD4-213ENST00000591914 PODXLO00592 558 aa29.68■■■□□ 2.34
SMAD4-213ENST00000591914 ADRB2P07550 413 aa29.68■■■□□ 2.34
SMAD4-213ENST00000591914 FGFR3P22607 806 aa29.68■■■□□ 2.34
SMAD4-213ENST00000591914 RPL9P32969 192 aaKnown RBP29.68■■■□□ 2.34
SMAD4-213ENST00000591914 ENOX2Q16206 610 aaKnown RBP29.68■■■□□ 2.34
SMAD4-213ENST00000591914 RESP18Q5W5W9 173 aa29.68■■■□□ 2.34
SMAD4-213ENST00000591914 CEP57Q86XR8 500 aa29.68■■■□□ 2.34
SMAD4-213ENST00000591914 LNX1Q8TBB1 728 aaPredicted RBP29.68■■■□□ 2.34
SMAD4-213ENST00000591914 STAMQ92783 540 aa29.68■■■□□ 2.34
SMAD4-213ENST00000591914 EPHX3Q9H6B9 360 aa29.68■■■□□ 2.34
SMAD4-213ENST00000591914 MAN1C1Q9NR34 630 aa29.68■■■□□ 2.34
SMAD4-213ENST00000591914 TBC1D7Q9P0N9 293 aa29.68■■■□□ 2.34
SMAD4-213ENST00000591914 TISP43B9A030 160 aa29.67■■■□□ 2.34
SMAD4-213ENST00000591914 TRAPPC3O43617 180 aa29.67■■■□□ 2.34
SMAD4-213ENST00000591914 RPL17P18621 184 aaKnown RBP29.67■■■□□ 2.34
SMAD4-213ENST00000591914 MTHFRP42898 656 aa29.67■■■□□ 2.34
SMAD4-213ENST00000591914 SLFN12LQ6IEE8 588 aa29.67■■■□□ 2.34
SMAD4-213ENST00000591914 PDXDC1Q6P996 788 aa29.67■■■□□ 2.34
SMAD4-213ENST00000591914 RIPOR3Q96MK2 946 aa29.67■■■□□ 2.34
SMAD4-213ENST00000591914 TRIM9Q9C026 710 aa29.67■■■□□ 2.34
SMAD4-213ENST00000591914 DPP7Q9UHL4 492 aa29.67■■■□□ 2.34
SMAD4-213ENST00000591914 CPSF3Q9UKF6 684 aaKnown RBP29.67■■■□□ 2.34
SMAD4-213ENST00000591914 CASP5P51878 434 aa29.66■■■□□ 2.34
SMAD4-213ENST00000591914 PPP2R3AQ06190 1150 aa29.66■■■□□ 2.34
SMAD4-213ENST00000591914 KCNA1Q09470 495 aa29.66■■■□□ 2.34
SMAD4-213ENST00000591914 ZBTB6Q15916 424 aa29.66■■■□□ 2.34
SMAD4-213ENST00000591914 PSMD5Q16401 504 aa29.66■■■□□ 2.34
SMAD4-213ENST00000591914 L1TD1Q5T7N2 865 aaKnown RBP29.66■■■□□ 2.34
SMAD4-213ENST00000591914 CNNM4Q6P4Q7 775 aa29.66■■■□□ 2.34
SMAD4-213ENST00000591914 LILRA6Q6PI73 481 aa29.66■■■□□ 2.34
SMAD4-213ENST00000591914 TMC5Q6UXY8 1006 aa29.66■■■□□ 2.34
SMAD4-213ENST00000591914 CCDC65Q8IXS2 484 aa29.66■■■□□ 2.34
SMAD4-213ENST00000591914 HDAC7Q8WUI4 952 aa29.66■■■□□ 2.34
SMAD4-213ENST00000591914 RPGRIP1Q96KN7 1286 aa29.66■■■□□ 2.34
SMAD4-213ENST00000591914 CLSTN3Q9BQT9 956 aa29.66■■■□□ 2.34
SMAD4-213ENST00000591914 IKZF4Q9H2S9 585 aa29.66■■■□□ 2.34
SMAD4-213ENST00000591914 POMKQ9H5K3 350 aa29.66■■■□□ 2.34
SMAD4-213ENST00000591914 RPF1Q9H9Y2 349 aaKnown RBP29.66■■■□□ 2.34
SMAD4-213ENST00000591914 MAGEF1Q9HAY2 307 aa29.66■■■□□ 2.34
SMAD4-213ENST00000591914 FAM13BQ9NYF5 915 aa29.66■■■□□ 2.34
SMAD4-213ENST00000591914 TUBGCP4Q9UGJ1 667 aa29.66■■■□□ 2.34
SMAD4-213ENST00000591914 LACTBL1A8MY62 500 aa29.65■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms