RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 EIF2AK1Q9BQI3 630 aaKnown RBP10.44□□□□□ -0.74
BRCA1-226ENST00000591534 C1QTNF2Q9BXJ5 285 aa10.44□□□□□ -0.74
BRCA1-226ENST00000591534 RGL1Q9NZL6 768 aa10.44□□□□□ -0.74
BRCA1-226ENST00000591534 FNIP2Q9P278 1114 aa10.44□□□□□ -0.74
BRCA1-226ENST00000591534 ORC3Q9UBD5 711 aaPredicted RBP10.44□□□□□ -0.74
BRCA1-226ENST00000591534 ZFHX2Q9C0A1 2572 aaPredicted RBP10.44□□□□□ -0.74
BRCA1-226ENST00000591534 SF3B1O75533 1304 aaKnown RBP eCLIP10.43□□□□□ -0.741e-6■■■■■ 112.6
BRCA1-226ENST00000591534 PFKFB2O60825 505 aa10.43□□□□□ -0.74
BRCA1-226ENST00000591534 SLITRK3O94933 977 aa10.43□□□□□ -0.74
BRCA1-226ENST00000591534 SRFP11831 508 aa10.43□□□□□ -0.74
BRCA1-226ENST00000591534 SCNN1GP51170 649 aa10.43□□□□□ -0.74
BRCA1-226ENST00000591534 AFF1P51825 1210 aaKnown RBP10.43□□□□□ -0.74
BRCA1-226ENST00000591534 ST3GAL1Q11201 340 aa10.43□□□□□ -0.74
BRCA1-226ENST00000591534 ELAVL2Q12926 359 aaKnown RBP10.43□□□□□ -0.74
BRCA1-226ENST00000591534 GRIK3Q13003 919 aa10.43□□□□□ -0.74
BRCA1-226ENST00000591534 ANGPT1Q15389 498 aa10.43□□□□□ -0.74
BRCA1-226ENST00000591534 ZC3H14Q6PJT7 736 aaKnown RBP10.43□□□□□ -0.74
BRCA1-226ENST00000591534 ASCL5Q7RTU5 278 aa10.43□□□□□ -0.74
BRCA1-226ENST00000591534 APBB1IPQ7Z5R6 666 aaPredicted RBP10.43□□□□□ -0.74
BRCA1-226ENST00000591534 FRMD5Q7Z6J6 570 aa10.43□□□□□ -0.74
BRCA1-226ENST00000591534 ZBTB8OSQ8IWT0 167 aa10.43□□□□□ -0.74
BRCA1-226ENST00000591534 DTWD2Q8NBA8 298 aa10.43□□□□□ -0.74
BRCA1-226ENST00000591534 MCPH1Q8NEM0 835 aa10.43□□□□□ -0.74
BRCA1-226ENST00000591534 SHDQ96IW2 340 aa10.43□□□□□ -0.74
BRCA1-226ENST00000591534 CPB2Q96IY4 423 aa10.43□□□□□ -0.74
BRCA1-226ENST00000591534 HSD17B14Q9BPX1 270 aa10.43□□□□□ -0.74
BRCA1-226ENST00000591534 APOL6Q9BWW8 343 aa10.43□□□□□ -0.74
BRCA1-226ENST00000591534 EIF2AQ9BY44 585 aaKnown RBP10.43□□□□□ -0.74
BRCA1-226ENST00000591534 C2orf40Q9H1Z8 148 aa10.43□□□□□ -0.74
BRCA1-226ENST00000591534 SMOC2Q9H3U7 446 aa10.43□□□□□ -0.74
BRCA1-226ENST00000591534 TTC12Q9H892 705 aaPredicted RBP10.43□□□□□ -0.74
BRCA1-226ENST00000591534 CHST7Q9NS84 486 aa10.43□□□□□ -0.74
BRCA1-226ENST00000591534 PRMT7Q9NVM4 692 aaPredicted RBP10.43□□□□□ -0.74
BRCA1-226ENST00000591534 MARCH5Q9NX47 278 aa10.43□□□□□ -0.74
BRCA1-226ENST00000591534 WRAP73Q9P2S5 460 aaPredicted RBP10.43□□□□□ -0.74
BRCA1-226ENST00000591534 PARP2Q9UGN5 583 aa10.43□□□□□ -0.74
BRCA1-226ENST00000591534 ADAM28Q9UKQ2 775 aa10.43□□□□□ -0.74
BRCA1-226ENST00000591534 NOVA2Q9UNW9 492 aaKnown RBP10.43□□□□□ -0.74
BRCA1-226ENST00000591534 DOLKQ9UPQ8 538 aa10.43□□□□□ -0.74
BRCA1-226ENST00000591534 A0A1B0GUA9 196 aa10.42□□□□□ -0.74
BRCA1-226ENST00000591534 TGM5O43548 720 aa10.42□□□□□ -0.74
BRCA1-226ENST00000591534 B4GALT3O60512 393 aa10.42□□□□□ -0.74
BRCA1-226ENST00000591534 NEMFO60524 1076 aa10.42□□□□□ -0.74
BRCA1-226ENST00000591534 FDPSP14324 419 aaKnown RBP10.42□□□□□ -0.74
BRCA1-226ENST00000591534 ARF4P18085 180 aaPredicted RBP10.42□□□□□ -0.74
BRCA1-226ENST00000591534 ARL2P36404 184 aa10.42□□□□□ -0.74
BRCA1-226ENST00000591534 MBTD1Q05BQ5 628 aa10.42□□□□□ -0.74
BRCA1-226ENST00000591534 ME3Q16798 604 aa10.42□□□□□ -0.74
BRCA1-226ENST00000591534 EML3Q32P44 896 aa10.42□□□□□ -0.74
BRCA1-226ENST00000591534 MAP7D1Q3KQU3 841 aa10.42□□□□□ -0.74
BRCA1-226ENST00000591534 LIN9Q5TKA1 542 aa10.42□□□□□ -0.74
BRCA1-226ENST00000591534 TMEM164Q5U3C3 297 aa10.42□□□□□ -0.74
BRCA1-226ENST00000591534 CWF19L1Q69YN2 538 aaKnown RBP10.42□□□□□ -0.74
BRCA1-226ENST00000591534 FUT10Q6P4F1 479 aa10.42□□□□□ -0.74
BRCA1-226ENST00000591534 LIAT1Q6ZQX7 453 aa10.42□□□□□ -0.74
BRCA1-226ENST00000591534 TAS1R1Q7RTX1 841 aa10.42□□□□□ -0.74
BRCA1-226ENST00000591534 PALB2Q86YC2 1186 aa10.42□□□□□ -0.74
BRCA1-226ENST00000591534 RNF168Q8IYW5 571 aaPredicted RBP10.42□□□□□ -0.74
BRCA1-226ENST00000591534 SLC44A3Q8N4M1 653 aa10.42□□□□□ -0.74
BRCA1-226ENST00000591534 ERMNQ8TAM6 284 aa10.42□□□□□ -0.74
BRCA1-226ENST00000591534 KCNG4Q8TDN1 519 aa10.42□□□□□ -0.74
BRCA1-226ENST00000591534 RIN2Q8WYP3 895 aaPredicted RBP10.42□□□□□ -0.74
BRCA1-226ENST00000591534 BORCS6Q96GS4 357 aa10.42□□□□□ -0.74
BRCA1-226ENST00000591534 ZSCAN31Q96LW9 406 aaPredicted RBP10.42□□□□□ -0.74
BRCA1-226ENST00000591534 ZFP42Q96MM3 310 aa10.42□□□□□ -0.74
BRCA1-226ENST00000591534 KIF2CQ99661 725 aa10.42□□□□□ -0.74
BRCA1-226ENST00000591534 ADPGKQ9BRR6 497 aa10.42□□□□□ -0.74
BRCA1-226ENST00000591534 PRKD2Q9BZL6 878 aa10.42□□□□□ -0.74
BRCA1-226ENST00000591534 NT5C3AQ9H0P0 336 aa10.42□□□□□ -0.74
BRCA1-226ENST00000591534 KIF3AQ9Y496 699 aa10.42□□□□□ -0.74
BRCA1-226ENST00000591534 LRRIQ4A6NIV6 560 aa10.41□□□□□ -0.74
BRCA1-226ENST00000591534 N4BP3O15049 544 aa10.41□□□□□ -0.74
BRCA1-226ENST00000591534 XYLBO75191 536 aa10.41□□□□□ -0.74
BRCA1-226ENST00000591534 PAPLNO95428 1278 aa10.41□□□□□ -0.74
BRCA1-226ENST00000591534 NPTXRO95502 500 aa10.41□□□□□ -0.74
BRCA1-226ENST00000591534 HNRNPA1P09651 372 aaKnown RBP eCLIP10.41□□□□□ -0.74
BRCA1-226ENST00000591534 LAMP2P13473 410 aa10.41□□□□□ -0.74
BRCA1-226ENST00000591534 NPR3P17342 541 aa10.41□□□□□ -0.74
BRCA1-226ENST00000591534 AKAP5P24588 427 aa10.41□□□□□ -0.74
BRCA1-226ENST00000591534 TXKP42681 527 aa10.41□□□□□ -0.74
BRCA1-226ENST00000591534 RARRES1P49788 294 aa10.41□□□□□ -0.74
BRCA1-226ENST00000591534 PDE4CQ08493 712 aa10.41□□□□□ -0.74
BRCA1-226ENST00000591534 SPIRE1Q08AE8 756 aa10.41□□□□□ -0.74
BRCA1-226ENST00000591534 TUSC3Q13454 348 aa10.41□□□□□ -0.74
BRCA1-226ENST00000591534 CAPSQ13938 189 aa10.41□□□□□ -0.74
BRCA1-226ENST00000591534 HSP90AA2PQ14568 343 aaPredicted RBP10.41□□□□□ -0.74
BRCA1-226ENST00000591534 SAFBQ15424 915 aaKnown RBP eCLIP10.41□□□□□ -0.74
BRCA1-226ENST00000591534 PHLDB3Q6NSJ2 640 aa10.41□□□□□ -0.74
BRCA1-226ENST00000591534 MTSS1LQ765P7 747 aa10.41□□□□□ -0.74
BRCA1-226ENST00000591534 ERMP1Q7Z2K6 904 aa10.41□□□□□ -0.74
BRCA1-226ENST00000591534 ADSSL1Q8N142 457 aa10.41□□□□□ -0.74
BRCA1-226ENST00000591534 KCTD17Q8N5Z5 321 aa10.41□□□□□ -0.74
BRCA1-226ENST00000591534 NACC1Q96RE7 527 aa10.41□□□□□ -0.74
BRCA1-226ENST00000591534 TTPALQ9BTX7 342 aa10.41□□□□□ -0.74
BRCA1-226ENST00000591534 POLR3FQ9H1D9 316 aaPredicted RBP10.41□□□□□ -0.74
BRCA1-226ENST00000591534 NXF3Q9H4D5 531 aaKnown RBP10.41□□□□□ -0.74
BRCA1-226ENST00000591534 XPNPEP1Q9NQW7 623 aa10.41□□□□□ -0.74
BRCA1-226ENST00000591534 SH2B1Q9NRF2 756 aaPredicted RBP10.41□□□□□ -0.74
BRCA1-226ENST00000591534 SIT1Q9Y3P8 196 aa10.41□□□□□ -0.74
BRCA1-226ENST00000591534 HES2Q9Y543 173 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms