RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 LAIR1Q6GTX8 287 aa19.16■□□□□ 0.66
RETREG3-210ENST00000590541 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.16■□□□□ 0.66
RETREG3-210ENST00000590541 RTL10Q7L3V2 364 aa19.16■□□□□ 0.66
RETREG3-210ENST00000590541 NETO1Q8TDF5 533 aa19.16■□□□□ 0.66
RETREG3-210ENST00000590541 DNASE1L2Q92874 299 aa19.16■□□□□ 0.66
RETREG3-210ENST00000590541 ELSPBP1Q96BH3 223 aa19.16■□□□□ 0.66
RETREG3-210ENST00000590541 SNTG2Q9NY99 539 aa19.16■□□□□ 0.66
RETREG3-210ENST00000590541 NDRG2Q9UN36 371 aaKnown RBP19.16■□□□□ 0.66
RETREG3-210ENST00000590541 MAP1BP46821 2468 aaKnown RBP19.15■□□□□ 0.66
RETREG3-210ENST00000590541 TTLL13PA6NNM8 815 aa19.15■□□□□ 0.66
RETREG3-210ENST00000590541 CEBPBP17676 345 aa19.15■□□□□ 0.66
RETREG3-210ENST00000590541 FCARP24071 287 aa19.15■□□□□ 0.66
RETREG3-210ENST00000590541 NRLP54845 237 aa19.15■□□□□ 0.66
RETREG3-210ENST00000590541 PPP4R3CPQ6ZMV5 832 aa19.15■□□□□ 0.66
RETREG3-210ENST00000590541 CELF5Q8N6W0 485 aaKnown RBP19.15■□□□□ 0.66
RETREG3-210ENST00000590541 HSD17B14Q9BPX1 270 aa19.15■□□□□ 0.66
RETREG3-210ENST00000590541 EIF2AK1Q9BQI3 630 aaKnown RBP19.15■□□□□ 0.66
RETREG3-210ENST00000590541 POLR3FQ9H1D9 316 aaPredicted RBP19.15■□□□□ 0.66
RETREG3-210ENST00000590541 AVENQ9NQS1 362 aaPredicted RBP19.15■□□□□ 0.66
RETREG3-210ENST00000590541 ANKEF1Q9NU02 776 aa19.15■□□□□ 0.66
RETREG3-210ENST00000590541 CDY1Q9Y6F8 540 aa19.15■□□□□ 0.66
RETREG3-210ENST00000590541 NRG2O14511 850 aaPredicted RBP19.14■□□□□ 0.65
RETREG3-210ENST00000590541 MARCH6O60337 910 aa19.14■□□□□ 0.65
RETREG3-210ENST00000590541 RECQL4O94761 1208 aa19.14■□□□□ 0.65
RETREG3-210ENST00000590541 RARRES1P49788 294 aa19.14■□□□□ 0.65
RETREG3-210ENST00000590541 PRIMPOLQ96LW4 560 aa19.14■□□□□ 0.65
RETREG3-210ENST00000590541 FZD8Q9H461 694 aa19.14■□□□□ 0.65
RETREG3-210ENST00000590541 PDZD7Q9H5P4 517 aa19.14■□□□□ 0.65
RETREG3-210ENST00000590541 RAB23Q9ULC3 237 aa19.14■□□□□ 0.65
RETREG3-210ENST00000590541 COL4A2P08572 1712 aa19.14■□□□□ 0.65
RETREG3-210ENST00000590541 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.13■□□□□ 0.65
RETREG3-210ENST00000590541 MAN2B1O00754 1011 aa19.13■□□□□ 0.65
RETREG3-210ENST00000590541 RETP07949 1114 aa19.13■□□□□ 0.65
RETREG3-210ENST00000590541 GRM2Q14416 872 aa19.13■□□□□ 0.65
RETREG3-210ENST00000590541 EARS2Q5JPH6 523 aaKnown RBP19.13■□□□□ 0.65
RETREG3-210ENST00000590541 PRSS36Q5K4E3 855 aa19.13■□□□□ 0.65
RETREG3-210ENST00000590541 CD300LGQ6UXG3 332 aa19.13■□□□□ 0.65
RETREG3-210ENST00000590541 PIK3AP1Q6ZUJ8 805 aa19.13■□□□□ 0.65
RETREG3-210ENST00000590541 SLFN12Q8IYM2 578 aa19.13■□□□□ 0.65
RETREG3-210ENST00000590541 OXER1Q8TDS5 423 aa19.13■□□□□ 0.65
RETREG3-210ENST00000590541 NAP1L4Q99733 375 aaKnown RBP19.13■□□□□ 0.65
RETREG3-210ENST00000590541 GPRC5CQ9NQ84 441 aa19.13■□□□□ 0.65
RETREG3-210ENST00000590541 PRMT7Q9NVM4 692 aaPredicted RBP19.13■□□□□ 0.65
RETREG3-210ENST00000590541 BACE2Q9Y5Z0 518 aa19.13■□□□□ 0.65
RETREG3-210ENST00000590541 A0A087WWV3 80 aa19.12■□□□□ 0.65
RETREG3-210ENST00000590541 LRRIQ4A6NIV6 560 aa19.12■□□□□ 0.65
RETREG3-210ENST00000590541 TMEM189-UBE2V1I3L0A0 370 aa19.12■□□□□ 0.65
RETREG3-210ENST00000590541 LRP3O75074 770 aa19.12■□□□□ 0.65
RETREG3-210ENST00000590541 TKTP29401 623 aaKnown RBP19.12■□□□□ 0.65
RETREG3-210ENST00000590541 NEK4P51957 841 aa19.12■□□□□ 0.65
RETREG3-210ENST00000590541 FAM187BQ17R55 369 aa19.12■□□□□ 0.65
RETREG3-210ENST00000590541 CDCA2Q69YH5 1023 aaPredicted RBP19.12■□□□□ 0.65
RETREG3-210ENST00000590541 PRR23BQ6ZRT6 265 aa19.12■□□□□ 0.65
RETREG3-210ENST00000590541 DDX27Q96GQ7 796 aaKnown RBP19.12■□□□□ 0.65
RETREG3-210ENST00000590541 CHAMP1Q96JM3 812 aa19.12■□□□□ 0.65
RETREG3-210ENST00000590541 IER2Q9BTL4 223 aa19.12■□□□□ 0.65
RETREG3-210ENST00000590541 BRD9Q9H8M2 597 aa19.12■□□□□ 0.65
RETREG3-210ENST00000590541 LMAN1LQ9HAT1 526 aa19.12■□□□□ 0.65
RETREG3-210ENST00000590541 SEMA4GQ9NTN9 838 aa19.12■□□□□ 0.65
RETREG3-210ENST00000590541 GJB4Q9NTQ9 266 aa19.12■□□□□ 0.65
RETREG3-210ENST00000590541 ORC3Q9UBD5 711 aaPredicted RBP19.12■□□□□ 0.65
RETREG3-210ENST00000590541 CFAP47Q6ZTR5 3102 aa19.11■□□□□ 0.65
RETREG3-210ENST00000590541 ARHGEF37A1IGU5 675 aa19.11■□□□□ 0.65
RETREG3-210ENST00000590541 N4BP3O15049 544 aa19.11■□□□□ 0.65
RETREG3-210ENST00000590541 USO1O60763 962 aaKnown RBP19.11■□□□□ 0.65
RETREG3-210ENST00000590541 BAG4O95429 457 aaKnown RBP19.11■□□□□ 0.65
RETREG3-210ENST00000590541 PTPN2P17706 415 aa19.11■□□□□ 0.65
RETREG3-210ENST00000590541 CCR3P51677 355 aa19.11■□□□□ 0.65
RETREG3-210ENST00000590541 PPP2R5DQ14738 602 aa19.11■□□□□ 0.65
RETREG3-210ENST00000590541 FAM78AQ5JUQ0 283 aa19.11■□□□□ 0.65
RETREG3-210ENST00000590541 PRR23CQ6ZRP0 262 aa19.11■□□□□ 0.65
RETREG3-210ENST00000590541 MAEAQ7L5Y9 396 aa19.11■□□□□ 0.65
RETREG3-210ENST00000590541 MAP4K3Q8IVH8 894 aa19.11■□□□□ 0.65
RETREG3-210ENST00000590541 NOSTRINQ8IVI9 506 aa19.11■□□□□ 0.65
RETREG3-210ENST00000590541 PIGOQ8TEQ8 1089 aa19.11■□□□□ 0.65
RETREG3-210ENST00000590541 FAM3CQ92520 227 aa19.11■□□□□ 0.65
RETREG3-210ENST00000590541 TCEAL4Q96EI5 215 aa19.11■□□□□ 0.65
RETREG3-210ENST00000590541 TRMT61BQ9BVS5 477 aaKnown RBP19.11■□□□□ 0.65
RETREG3-210ENST00000590541 ZFP14Q9HCL3 533 aa19.11■□□□□ 0.65
RETREG3-210ENST00000590541 ZNF334Q9HCZ1 680 aaPredicted RBP19.11■□□□□ 0.65
RETREG3-210ENST00000590541 USP20Q9Y2K6 914 aa19.11■□□□□ 0.65
RETREG3-210ENST00000590541 FAM205CA6NFA0 338 aa19.1■□□□□ 0.65
RETREG3-210ENST00000590541 GDF9O60383 454 aa19.1■□□□□ 0.65
RETREG3-210ENST00000590541 B3GAT3O94766 335 aa19.1■□□□□ 0.65
RETREG3-210ENST00000590541 EDN1P05305 212 aa19.1■□□□□ 0.65
RETREG3-210ENST00000590541 CCR2P41597 374 aa19.1■□□□□ 0.65
RETREG3-210ENST00000590541 RBM25P49756 843 aaKnown RBP19.1■□□□□ 0.65
RETREG3-210ENST00000590541 CLCNKBP51801 687 aa19.1■□□□□ 0.65
RETREG3-210ENST00000590541 SATB1Q01826 763 aa19.1■□□□□ 0.65
RETREG3-210ENST00000590541 GAS6Q14393 721 aa19.1■□□□□ 0.65
RETREG3-210ENST00000590541 CSRP2Q16527 193 aa19.1■□□□□ 0.65
RETREG3-210ENST00000590541 ANKS3Q6ZW76 656 aa19.1■□□□□ 0.65
RETREG3-210ENST00000590541 ZNF461Q8TAF7 563 aa19.1■□□□□ 0.65
RETREG3-210ENST00000590541 GTF3C6Q969F1 213 aa19.1■□□□□ 0.65
RETREG3-210ENST00000590541 BRMS1Q9HCU9 246 aa19.1■□□□□ 0.65
RETREG3-210ENST00000590541 TRPV5Q9NQA5 729 aa19.1■□□□□ 0.65
RETREG3-210ENST00000590541 USP24Q9UPU5 2620 aa19.1■□□□□ 0.65
RETREG3-210ENST00000590541 CHD8Q9HCK8 2581 aa19.1■□□□□ 0.65
RETREG3-210ENST00000590541 I3L4J1 428 aa19.09■□□□□ 0.65
RETREG3-210ENST00000590541 HRO43593 1189 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms