RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 SMC2O95347 1197 aa23.44■■□□□ 1.34
R3HDM4-206ENST00000590454 SKIP12755 728 aa23.44■■□□□ 1.34
R3HDM4-206ENST00000590454 ITGA4P13612 1032 aa23.44■■□□□ 1.34
R3HDM4-206ENST00000590454 ADSSP30520 456 aa23.44■■□□□ 1.34
R3HDM4-206ENST00000590454 ERVFC1P60507 584 aa23.44■■□□□ 1.34
R3HDM4-206ENST00000590454 OSTNP61366 133 aa23.44■■□□□ 1.34
R3HDM4-206ENST00000590454 MCL1Q07820 350 aa23.44■■□□□ 1.34
R3HDM4-206ENST00000590454 DCAF4L1Q3SXM0 396 aa23.44■■□□□ 1.34
R3HDM4-206ENST00000590454 ZBTB41Q5SVQ8 909 aa23.44■■□□□ 1.34
R3HDM4-206ENST00000590454 THNSL1Q8IYQ7 743 aa23.44■■□□□ 1.34
R3HDM4-206ENST00000590454 S1PR5Q9H228 398 aa23.44■■□□□ 1.34
R3HDM4-206ENST00000590454 KLK14Q9P0G3 267 aa23.44■■□□□ 1.34
R3HDM4-206ENST00000590454 MAN1B1Q9UKM7 699 aa23.44■■□□□ 1.34
R3HDM4-206ENST00000590454 MAPK8IP1Q9UQF2 711 aa23.44■■□□□ 1.34
R3HDM4-206ENST00000590454 KIAA1671Q9BY89 1806 aa23.43■■□□□ 1.34
R3HDM4-206ENST00000590454 A0A0B4J269 797 aa23.43■■□□□ 1.34
R3HDM4-206ENST00000590454 TBKBP1A7MCY6 615 aa23.43■■□□□ 1.34
R3HDM4-206ENST00000590454 H0Y858 1186 aa23.43■■□□□ 1.34
R3HDM4-206ENST00000590454 FSCN2O14926 492 aa23.43■■□□□ 1.34
R3HDM4-206ENST00000590454 MEFVO15553 781 aaPredicted RBP23.43■■□□□ 1.34
R3HDM4-206ENST00000590454 TGFB1I1O43294 461 aa23.43■■□□□ 1.34
R3HDM4-206ENST00000590454 MCF2P10911 925 aa23.43■■□□□ 1.34
R3HDM4-206ENST00000590454 ABCD1P33897 745 aa23.43■■□□□ 1.34
R3HDM4-206ENST00000590454 MATR3P43243 847 aaKnown RBP eCLIP23.43■■□□□ 1.34
R3HDM4-206ENST00000590454 BMT2Q1RMZ1 405 aa23.43■■□□□ 1.34
R3HDM4-206ENST00000590454 ANKRD54Q6NXT1 300 aa23.43■■□□□ 1.34
R3HDM4-206ENST00000590454 SYCP3Q8IZU3 236 aa23.43■■□□□ 1.34
R3HDM4-206ENST00000590454 ZSWIM2Q8NEG5 633 aa23.43■■□□□ 1.34
R3HDM4-206ENST00000590454 GSDMAQ96QA5 445 aa23.43■■□□□ 1.34
R3HDM4-206ENST00000590454 STYXL1Q9Y6J8 313 aa23.43■■□□□ 1.34
R3HDM4-206ENST00000590454 PROB1E7EW31 1015 aa23.42■■□□□ 1.34
R3HDM4-206ENST00000590454 BIN1O00499 593 aa23.42■■□□□ 1.34
R3HDM4-206ENST00000590454 CLDN3O15551 220 aa23.42■■□□□ 1.34
R3HDM4-206ENST00000590454 FAM189A1O60320 539 aa23.42■■□□□ 1.34
R3HDM4-206ENST00000590454 OFD1O75665 1012 aa23.42■■□□□ 1.34
R3HDM4-206ENST00000590454 BMP6P22004 513 aa23.42■■□□□ 1.34
R3HDM4-206ENST00000590454 KCNC3Q14003 757 aa23.42■■□□□ 1.34
R3HDM4-206ENST00000590454 NOLC1Q14978 699 aaKnown RBP eCLIP23.42■■□□□ 1.34
R3HDM4-206ENST00000590454 LRRC55Q6ZSA7 311 aa23.42■■□□□ 1.34
R3HDM4-206ENST00000590454 STXBP4Q6ZWJ1 553 aa23.42■■□□□ 1.34
R3HDM4-206ENST00000590454 CCDC47Q96A33 483 aaKnown RBP23.42■■□□□ 1.34
R3HDM4-206ENST00000590454 PGBD4Q96DM1 585 aa23.42■■□□□ 1.34
R3HDM4-206ENST00000590454 ZFP42Q96MM3 310 aa23.42■■□□□ 1.34
R3HDM4-206ENST00000590454 TYW1Q9NV66 732 aaKnown RBP23.42■■□□□ 1.34
R3HDM4-206ENST00000590454 PARP2Q9UGN5 583 aa23.42■■□□□ 1.34
R3HDM4-206ENST00000590454 INPP5FQ9Y2H2 1132 aa23.42■■□□□ 1.34
R3HDM4-206ENST00000590454 RECQL4O94761 1208 aa23.41■■□□□ 1.34
R3HDM4-206ENST00000590454 MLH1P40692 756 aa23.41■■□□□ 1.34
R3HDM4-206ENST00000590454 TNFSF9P41273 254 aa23.41■■□□□ 1.34
R3HDM4-206ENST00000590454 COLGALT1Q8NBJ5 622 aa23.41■■□□□ 1.34
R3HDM4-206ENST00000590454 GAD1Q99259 594 aa23.41■■□□□ 1.34
R3HDM4-206ENST00000590454 CBWD1Q9BRT8 395 aa23.41■■□□□ 1.34
R3HDM4-206ENST00000590454 NUP62CLQ9H1M0 184 aa23.41■■□□□ 1.34
R3HDM4-206ENST00000590454 TMEM206Q9H813 350 aa23.41■■□□□ 1.34
R3HDM4-206ENST00000590454 RSAD1Q9HA92 442 aa23.41■■□□□ 1.34
R3HDM4-206ENST00000590454 MIOSQ9NXC5 875 aa23.41■■□□□ 1.34
R3HDM4-206ENST00000590454 PUF60Q9UHX1 559 aaKnown RBP23.41■■□□□ 1.34
R3HDM4-206ENST00000590454 EXOC7Q9UPT5 735 aa23.41■■□□□ 1.34
R3HDM4-206ENST00000590454 LZTS1Q9Y250 596 aa23.41■■□□□ 1.34
R3HDM4-206ENST00000590454 NR2E1Q9Y466 385 aa23.41■■□□□ 1.34
R3HDM4-206ENST00000590454 UBE4BO95155 1302 aa23.4■■□□□ 1.34
R3HDM4-206ENST00000590454 GALR2O43603 387 aaPredicted RBP23.4■■□□□ 1.34
R3HDM4-206ENST00000590454 PDGFBP01127 241 aaPredicted RBP23.4■■□□□ 1.34
R3HDM4-206ENST00000590454 HOXB8P17481 243 aaPredicted RBP23.4■■□□□ 1.34
R3HDM4-206ENST00000590454 GRM5P41594 1212 aa23.4■■□□□ 1.34
R3HDM4-206ENST00000590454 KNOP1Q1ED39 458 aaKnown RBP23.4■■□□□ 1.34
R3HDM4-206ENST00000590454 SYCE2Q6PIF2 218 aa23.4■■□□□ 1.34
R3HDM4-206ENST00000590454 MSTO1Q9BUK6 570 aa23.4■■□□□ 1.34
R3HDM4-206ENST00000590454 TMEM117Q9H0C3 514 aa23.4■■□□□ 1.34
R3HDM4-206ENST00000590454 PCIF1Q9H4Z3 704 aa23.4■■□□□ 1.34
R3HDM4-206ENST00000590454 RMND1Q9NWS8 449 aa23.4■■□□□ 1.34
R3HDM4-206ENST00000590454 KIAA1468Q9P260 1216 aa23.4■■□□□ 1.34
R3HDM4-206ENST00000590454 USP34Q70CQ2 3546 aa23.39■■□□□ 1.34
R3HDM4-206ENST00000590454 PLXNA4Q9HCM2 1894 aa23.39■■□□□ 1.34
R3HDM4-206ENST00000590454 ARL5CA6NH57 179 aa23.39■■□□□ 1.33
R3HDM4-206ENST00000590454 B4GALT3O60512 393 aa23.39■■□□□ 1.33
R3HDM4-206ENST00000590454 LAG3P18627 525 aa23.39■■□□□ 1.33
R3HDM4-206ENST00000590454 PLCB3Q01970 1234 aa23.39■■□□□ 1.33
R3HDM4-206ENST00000590454 ZNF658Q5TYW1 1059 aaPredicted RBP23.39■■□□□ 1.33
R3HDM4-206ENST00000590454 PLPP4Q5VZY2 271 aa23.39■■□□□ 1.33
R3HDM4-206ENST00000590454 UBALD2Q8IYN6 164 aa23.39■■□□□ 1.33
R3HDM4-206ENST00000590454 KREMEN2Q8NCW0 462 aa23.39■■□□□ 1.33
R3HDM4-206ENST00000590454 GSTCDQ8NEC7 633 aa23.39■■□□□ 1.33
R3HDM4-206ENST00000590454 POMGNT1Q8WZA1 660 aa23.39■■□□□ 1.33
R3HDM4-206ENST00000590454 SAAL1Q96ER3 474 aa23.39■■□□□ 1.33
R3HDM4-206ENST00000590454 APOL5Q9BWW9 433 aa23.39■■□□□ 1.33
R3HDM4-206ENST00000590454 GBP3Q9H0R5 595 aa23.39■■□□□ 1.33
R3HDM4-206ENST00000590454 KCTD10Q9H3F6 313 aa23.39■■□□□ 1.33
R3HDM4-206ENST00000590454 AGPAT3Q9NRZ7 376 aa23.39■■□□□ 1.33
R3HDM4-206ENST00000590454 ZDBF2Q9HCK1 2354 aa23.38■■□□□ 1.33
R3HDM4-206ENST00000590454 TRIP11Q15643 1979 aa23.38■■□□□ 1.33
R3HDM4-206ENST00000590454 CLIC2O15247 247 aa23.38■■□□□ 1.33
R3HDM4-206ENST00000590454 HOXA2O43364 376 aa23.38■■□□□ 1.33
R3HDM4-206ENST00000590454 POMCP01189 267 aa23.38■■□□□ 1.33
R3HDM4-206ENST00000590454 CD44P16070 742 aaKnown RBP23.38■■□□□ 1.33
R3HDM4-206ENST00000590454 SP100P23497 879 aaPredicted RBP23.38■■□□□ 1.33
R3HDM4-206ENST00000590454 PRCPP42785 496 aa23.38■■□□□ 1.33
R3HDM4-206ENST00000590454 ACOT2P49753 483 aa23.38■■□□□ 1.33
R3HDM4-206ENST00000590454 MORC3Q14149 939 aa23.38■■□□□ 1.33
R3HDM4-206ENST00000590454 NOMO2Q5JPE7 1267 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms