RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 WNT16Q9UBV4 365 aa13.4□□□□□ -0.26
VAT1-206ENST00000589709 BACE2Q9Y5Z0 518 aa13.4□□□□□ -0.26
VAT1-206ENST00000589709 VWA3AA6NCI4 1184 aa13.39□□□□□ -0.27
VAT1-206ENST00000589709 SFI1A8K8P3 1242 aa13.39□□□□□ -0.27
VAT1-206ENST00000589709 SLC16A4O15374 487 aa13.39□□□□□ -0.27
VAT1-206ENST00000589709 ADAM12O43184 909 aa13.39□□□□□ -0.27
VAT1-206ENST00000589709 CD2BP2O95400 341 aaKnown RBP13.39□□□□□ -0.27
VAT1-206ENST00000589709 PLS3P13797 630 aa13.39□□□□□ -0.27
VAT1-206ENST00000589709 SMTNP53814 917 aa13.39□□□□□ -0.27
VAT1-206ENST00000589709 SLC12A3P55017 1021 aa13.39□□□□□ -0.27
VAT1-206ENST00000589709 MPZL3Q6UWV2 235 aa13.39□□□□□ -0.27
VAT1-206ENST00000589709 SLC44A3Q8N4M1 653 aa13.39□□□□□ -0.27
VAT1-206ENST00000589709 TMEM161BQ8NDZ6 487 aa13.39□□□□□ -0.27
VAT1-206ENST00000589709 AK8Q96MA6 479 aa13.39□□□□□ -0.27
VAT1-206ENST00000589709 ACAP3Q96P50 834 aa13.39□□□□□ -0.27
VAT1-206ENST00000589709 TCHPQ9BT92 498 aa13.39□□□□□ -0.27
VAT1-206ENST00000589709 MFSD1Q9H3U5 465 aa13.39□□□□□ -0.27
VAT1-206ENST00000589709 SMC3Q9UQE7 1217 aa13.39□□□□□ -0.27
VAT1-206ENST00000589709 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.39□□□□□ -0.27
VAT1-206ENST00000589709 ANHXE9PGG2 379 aa13.38□□□□□ -0.27
VAT1-206ENST00000589709 TOM1L1O75674 476 aa13.38□□□□□ -0.27
VAT1-206ENST00000589709 C8AP07357 584 aa13.38□□□□□ -0.27
VAT1-206ENST00000589709 PLA2G4BP0C869 781 aa13.38□□□□□ -0.27
VAT1-206ENST00000589709 MAPTP10636 758 aaKnown RBP13.38□□□□□ -0.27
VAT1-206ENST00000589709 NPR3P17342 541 aa13.38□□□□□ -0.27
VAT1-206ENST00000589709 SCP2P22307 547 aa13.38□□□□□ -0.27
VAT1-206ENST00000589709 IGFBP6P24592 240 aaPredicted RBP13.38□□□□□ -0.27
VAT1-206ENST00000589709 RPL9P32969 192 aaKnown RBP13.38□□□□□ -0.27
VAT1-206ENST00000589709 OR1D2P34982 312 aa13.38□□□□□ -0.27
VAT1-206ENST00000589709 SOX4Q06945 474 aaPredicted RBP13.38□□□□□ -0.27
VAT1-206ENST00000589709 STRN3Q13033 797 aa13.38□□□□□ -0.27
VAT1-206ENST00000589709 ZRSR1Q15695 479 aaKnown RBP13.38□□□□□ -0.27
VAT1-206ENST00000589709 TMEM119Q4V9L6 283 aa13.38□□□□□ -0.27
VAT1-206ENST00000589709 PPM1LQ5SGD2 360 aa13.38□□□□□ -0.27
VAT1-206ENST00000589709 ZPBP2Q6X784 338 aa13.38□□□□□ -0.27
VAT1-206ENST00000589709 ANKS3Q6ZW76 656 aa13.38□□□□□ -0.27
VAT1-206ENST00000589709 CDK5RAP3Q96JB5 506 aa13.38□□□□□ -0.27
VAT1-206ENST00000589709 SNX27Q96L92 541 aa13.38□□□□□ -0.27
VAT1-206ENST00000589709 ZMAT2Q96NC0 199 aaKnown RBP13.38□□□□□ -0.27
VAT1-206ENST00000589709 PHOX2BQ99453 314 aa13.38□□□□□ -0.27
VAT1-206ENST00000589709 CNTN3Q9P232 1028 aa13.38□□□□□ -0.27
VAT1-206ENST00000589709 H0YCG3 227 aa13.37□□□□□ -0.27
VAT1-206ENST00000589709 XYLBO75191 536 aa13.37□□□□□ -0.27
VAT1-206ENST00000589709 BMP15O95972 392 aa13.37□□□□□ -0.27
VAT1-206ENST00000589709 SRFP11831 508 aa13.37□□□□□ -0.27
VAT1-206ENST00000589709 AOC1P19801 751 aa13.37□□□□□ -0.27
VAT1-206ENST00000589709 FSHRP23945 695 aa13.37□□□□□ -0.27
VAT1-206ENST00000589709 OSTNP61366 133 aa13.37□□□□□ -0.27
VAT1-206ENST00000589709 HTR4Q13639 388 aa13.37□□□□□ -0.27
VAT1-206ENST00000589709 ARSHQ5FYA8 562 aa13.37□□□□□ -0.27
VAT1-206ENST00000589709 AXDND1Q5T1B0 1012 aaPredicted RBP13.37□□□□□ -0.27
VAT1-206ENST00000589709 LARP1BQ659C4 914 aaKnown RBP13.37□□□□□ -0.27
VAT1-206ENST00000589709 CWF19L1Q69YN2 538 aaKnown RBP13.37□□□□□ -0.27
VAT1-206ENST00000589709 RSPO2Q6UXX9 243 aaPredicted RBP13.37□□□□□ -0.27
VAT1-206ENST00000589709 GRASPQ7Z6J2 395 aaPredicted RBP13.37□□□□□ -0.27
VAT1-206ENST00000589709 C3orf58Q8NDZ4 430 aa13.37□□□□□ -0.27
VAT1-206ENST00000589709 RSAD2Q8WXG1 361 aa13.37□□□□□ -0.27
VAT1-206ENST00000589709 ATOH1Q92858 354 aaPredicted RBP13.37□□□□□ -0.27
VAT1-206ENST00000589709 TBC1D32Q96NH3 1257 aa13.37□□□□□ -0.27
VAT1-206ENST00000589709 RTP3Q9BQQ7 232 aa13.37□□□□□ -0.27
VAT1-206ENST00000589709 GOLGA2P5Q9HBQ8 144 aa13.37□□□□□ -0.27
VAT1-206ENST00000589709 LARSQ9P2J5 1176 aaKnown RBP13.37□□□□□ -0.27
VAT1-206ENST00000589709 FBXL21Q9UKT6 434 aa13.37□□□□□ -0.27
VAT1-206ENST00000589709 CDH7Q9ULB5 785 aa13.37□□□□□ -0.27
VAT1-206ENST00000589709 CDY1Q9Y6F8 540 aa13.37□□□□□ -0.27
VAT1-206ENST00000589709 DOCK8Q8NF50 2099 aa13.36□□□□□ -0.27
VAT1-206ENST00000589709 PROB1E7EW31 1015 aa13.36□□□□□ -0.27
VAT1-206ENST00000589709 H0Y858 1186 aa13.36□□□□□ -0.27
VAT1-206ENST00000589709 PODXLO00592 558 aa13.36□□□□□ -0.27
VAT1-206ENST00000589709 SYN3O14994 580 aa13.36□□□□□ -0.27
VAT1-206ENST00000589709 MEFVO15553 781 aaPredicted RBP13.36□□□□□ -0.27
VAT1-206ENST00000589709 NARSO43776 548 aaKnown RBP13.36□□□□□ -0.27
VAT1-206ENST00000589709 TBC1D4O60343 1298 aa13.36□□□□□ -0.27
VAT1-206ENST00000589709 TKTP29401 623 aaKnown RBP13.36□□□□□ -0.27
VAT1-206ENST00000589709 UBA7P41226 1012 aa13.36□□□□□ -0.27
VAT1-206ENST00000589709 BRCC3P46736 316 aa13.36□□□□□ -0.27
VAT1-206ENST00000589709 MCL1Q07820 350 aa13.36□□□□□ -0.27
VAT1-206ENST00000589709 RAD51AP2Q09MP3 1159 aa13.36□□□□□ -0.27
VAT1-206ENST00000589709 NOLC1Q14978 699 aaKnown RBP eCLIP13.36□□□□□ -0.27
VAT1-206ENST00000589709 SLC10A6Q3KNW5 377 aa13.36□□□□□ -0.27
VAT1-206ENST00000589709 SLC8B1Q6J4K2 584 aa13.36□□□□□ -0.27
VAT1-206ENST00000589709 GET4Q7L5D6 327 aaPredicted RBP13.36□□□□□ -0.27
VAT1-206ENST00000589709 BRAPQ7Z569 592 aa13.36□□□□□ -0.27
VAT1-206ENST00000589709 SIX5Q8N196 739 aa13.36□□□□□ -0.27
VAT1-206ENST00000589709 FLCNQ8NFG4 579 aa13.36□□□□□ -0.27
VAT1-206ENST00000589709 ZNF461Q8TAF7 563 aa13.36□□□□□ -0.27
VAT1-206ENST00000589709 SLC7A14Q8TBB6 771 aa13.36□□□□□ -0.27
VAT1-206ENST00000589709 ZBTB45Q96K62 511 aaPredicted RBP13.36□□□□□ -0.27
VAT1-206ENST00000589709 PLIN2Q99541 437 aa13.36□□□□□ -0.27
VAT1-206ENST00000589709 PLEKHA5Q9HAU0 1116 aa13.36□□□□□ -0.27
VAT1-206ENST00000589709 SLC2A4RGQ9NR83 387 aa13.36□□□□□ -0.27
VAT1-206ENST00000589709 KCNH3Q9ULD8 1083 aa13.36□□□□□ -0.27
VAT1-206ENST00000589709 ODF2LQ9ULJ1 636 aa13.36□□□□□ -0.27
VAT1-206ENST00000589709 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.36□□□□□ -0.27
VAT1-206ENST00000589709 VWA8A3KMH1 1905 aa13.35□□□□□ -0.27
VAT1-206ENST00000589709 I3L4J1 428 aa13.35□□□□□ -0.27
VAT1-206ENST00000589709 CLDN3O15551 220 aa13.35□□□□□ -0.27
VAT1-206ENST00000589709 ABLIM3O94929 683 aa13.35□□□□□ -0.27
VAT1-206ENST00000589709 NCKAP1LP55160 1127 aa13.35□□□□□ -0.27
VAT1-206ENST00000589709 MRPL58Q14197 206 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms