RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 NOCTQ9UK39 431 aaKnown RBP10.71□□□□□ -0.69
VPS25-202ENST00000589219 ZNF236Q9UL36 1845 aa10.71□□□□□ -0.69
VPS25-202ENST00000589219 HPCAL4Q9UM19 191 aa10.71□□□□□ -0.69
VPS25-202ENST00000589219 NOC2LQ9Y3T9 749 aaKnown RBP10.71□□□□□ -0.69
VPS25-202ENST00000589219 KIAA1217Q5T5P2 1943 aa10.7□□□□□ -0.7
VPS25-202ENST00000589219 ZNFX1Q9P2E3 1918 aaKnown RBP10.7□□□□□ -0.7
VPS25-202ENST00000589219 SOWAHBA6NEL2 793 aa10.7□□□□□ -0.7
VPS25-202ENST00000589219 C19orf67A6NJJ6 358 aa10.7□□□□□ -0.7
VPS25-202ENST00000589219 TMCO5BA8MYB1 307 aa10.7□□□□□ -0.7
VPS25-202ENST00000589219 MIF4GDA9UHW6 222 aaKnown RBP10.7□□□□□ -0.7
VPS25-202ENST00000589219 H3BQF6 201 aa10.7□□□□□ -0.7
VPS25-202ENST00000589219 CEP104O60308 925 aa10.7□□□□□ -0.7
VPS25-202ENST00000589219 GLRA2P23416 452 aa10.7□□□□□ -0.7
VPS25-202ENST00000589219 BMP8BP34820 402 aa10.7□□□□□ -0.7
VPS25-202ENST00000589219 MNX1P50219 401 aaPredicted RBP10.7□□□□□ -0.7
VPS25-202ENST00000589219 CLDN10P78369 228 aa10.7□□□□□ -0.7
VPS25-202ENST00000589219 SP2Q02086 613 aa10.7□□□□□ -0.7
VPS25-202ENST00000589219 CNTN2Q02246 1040 aa10.7□□□□□ -0.7
VPS25-202ENST00000589219 TARBP2Q15633 366 aaKnown RBP10.7□□□□□ -0.7
VPS25-202ENST00000589219 PPP2R5EQ16537 467 aa10.7□□□□□ -0.7
VPS25-202ENST00000589219 LHX8Q68G74 356 aa10.7□□□□□ -0.7
VPS25-202ENST00000589219 PPP1R2P3Q6NXS1 205 aa10.7□□□□□ -0.7
VPS25-202ENST00000589219 SEPT14Q6ZU15 432 aa10.7□□□□□ -0.7
VPS25-202ENST00000589219 PPM1KQ8N3J5 372 aa10.7□□□□□ -0.7
VPS25-202ENST00000589219 GOLGA6L1Q8N7Z2 621 aa10.7□□□□□ -0.7
VPS25-202ENST00000589219 ZSWIM2Q8NEG5 633 aa10.7□□□□□ -0.7
VPS25-202ENST00000589219 HELQQ8TDG4 1101 aa10.7□□□□□ -0.7
VPS25-202ENST00000589219 ASAP3Q8TDY4 903 aa10.7□□□□□ -0.7
VPS25-202ENST00000589219 SEPT1Q8WYJ6 367 aa10.7□□□□□ -0.7
VPS25-202ENST00000589219 CCDC127Q96BQ5 260 aa10.7□□□□□ -0.7
VPS25-202ENST00000589219 MS4A14Q96JA4 679 aa10.7□□□□□ -0.7
VPS25-202ENST00000589219 KREMEN1Q96MU8 473 aa10.7□□□□□ -0.7
VPS25-202ENST00000589219 CEP89Q96ST8 783 aa10.7□□□□□ -0.7
VPS25-202ENST00000589219 JPH2Q9BR39 696 aaPredicted RBP10.7□□□□□ -0.7
VPS25-202ENST00000589219 CARD9Q9H257 536 aa10.7□□□□□ -0.7
VPS25-202ENST00000589219 MROH8Q9H579 483 aa10.7□□□□□ -0.7
VPS25-202ENST00000589219 SLITRK6Q9H5Y7 841 aa10.7□□□□□ -0.7
VPS25-202ENST00000589219 GDF3Q9NR23 364 aa10.7□□□□□ -0.7
VPS25-202ENST00000589219 ST7Q9NRC1 585 aa10.7□□□□□ -0.7
VPS25-202ENST00000589219 SMARCAL1Q9NZC9 954 aa10.7□□□□□ -0.7
VPS25-202ENST00000589219 PACSIN2Q9UNF0 486 aaPredicted RBP10.7□□□□□ -0.7
VPS25-202ENST00000589219 WDR81Q562E7 1941 aa10.69□□□□□ -0.7
VPS25-202ENST00000589219 GSTTP1A0A1W2PQM5 241 aa10.69□□□□□ -0.7
VPS25-202ENST00000589219 LRRIQ4A6NIV6 560 aa10.69□□□□□ -0.7
VPS25-202ENST00000589219 BUB1BO60566 1050 aaPredicted RBP10.69□□□□□ -0.7
VPS25-202ENST00000589219 LGR5O75473 907 aa10.69□□□□□ -0.7
VPS25-202ENST00000589219 HEXIM1O94992 359 aaKnown RBP10.69□□□□□ -0.7
VPS25-202ENST00000589219 GGPS1O95749 300 aa10.69□□□□□ -0.7
VPS25-202ENST00000589219 COL6A1P12109 1028 aa10.69□□□□□ -0.7
VPS25-202ENST00000589219 ATP4AP20648 1035 aa10.69□□□□□ -0.7
VPS25-202ENST00000589219 ADORA2AP29274 412 aa10.69□□□□□ -0.7
VPS25-202ENST00000589219 MATR3P43243 847 aaKnown RBP eCLIP10.69□□□□□ -0.7
VPS25-202ENST00000589219 DNA2P51530 1060 aa10.69□□□□□ -0.7
VPS25-202ENST00000589219 EFNA5P52803 228 aa10.69□□□□□ -0.7
VPS25-202ENST00000589219 AP3M2P53677 418 aa10.69□□□□□ -0.7
VPS25-202ENST00000589219 GPC5P78333 572 aa10.69□□□□□ -0.7
VPS25-202ENST00000589219 CDR2Q01850 454 aa10.69□□□□□ -0.7
VPS25-202ENST00000589219 OLFML2BQ68BL8 750 aa10.69□□□□□ -0.7
VPS25-202ENST00000589219 ZPBP2Q6X784 338 aa10.69□□□□□ -0.7
VPS25-202ENST00000589219 C15orf39Q6ZRI6 1047 aa10.69□□□□□ -0.7
VPS25-202ENST00000589219 SV2AQ7L0J3 742 aa10.69□□□□□ -0.7
VPS25-202ENST00000589219 TRMT1LQ7Z2T5 733 aaKnown RBP10.69□□□□□ -0.7
VPS25-202ENST00000589219 ZNF677Q86XU0 584 aa10.69□□□□□ -0.7
VPS25-202ENST00000589219 ABRAQ8N0Z2 381 aa10.69□□□□□ -0.7
VPS25-202ENST00000589219 METTL13Q8N6R0 699 aa10.69□□□□□ -0.7
VPS25-202ENST00000589219 SLC35G2Q8TBE7 412 aa10.69□□□□□ -0.7
VPS25-202ENST00000589219 TAS1R2Q8TE23 839 aa10.69□□□□□ -0.7
VPS25-202ENST00000589219 SCFD2Q8WU76 684 aa10.69□□□□□ -0.7
VPS25-202ENST00000589219 SLC20A1Q8WUM9 679 aa10.69□□□□□ -0.7
VPS25-202ENST00000589219 TCP11Q8WWU5 503 aa10.69□□□□□ -0.7
VPS25-202ENST00000589219 PSPC1Q8WXF1 523 aaKnown RBP10.69□□□□□ -0.7
VPS25-202ENST00000589219 BBXQ8WY36 941 aaPredicted RBP10.69□□□□□ -0.7
VPS25-202ENST00000589219 SEMA4DQ92854 862 aa10.69□□□□□ -0.7
VPS25-202ENST00000589219 EXOC4Q96A65 974 aa10.69□□□□□ -0.7
VPS25-202ENST00000589219 ARHGEF26Q96DR7 871 aa10.69□□□□□ -0.7
VPS25-202ENST00000589219 TRIM11Q96F44 468 aa10.69□□□□□ -0.7
VPS25-202ENST00000589219 FNBP1Q96RU3 617 aa10.69□□□□□ -0.7
VPS25-202ENST00000589219 KRT12Q99456 494 aa10.69□□□□□ -0.7
VPS25-202ENST00000589219 CGRRF1Q99675 332 aa10.69□□□□□ -0.7
VPS25-202ENST00000589219 GDF15Q99988 308 aa10.69□□□□□ -0.7
VPS25-202ENST00000589219 FAM213AQ9BRX8 229 aa10.69□□□□□ -0.7
VPS25-202ENST00000589219 C2orf40Q9H1Z8 148 aa10.69□□□□□ -0.7
VPS25-202ENST00000589219 AZI2Q9H6S1 392 aa10.69□□□□□ -0.7
VPS25-202ENST00000589219 SUGCTQ9HAC7 445 aa10.69□□□□□ -0.7
VPS25-202ENST00000589219 PSD3Q9NYI0 1048 aa10.69□□□□□ -0.7
VPS25-202ENST00000589219 FLRT1Q9NZU1 646 aa10.69□□□□□ -0.7
VPS25-202ENST00000589219 DDX20Q9UHI6 824 aaKnown RBP10.69□□□□□ -0.7
VPS25-202ENST00000589219 DMGDHQ9UI17 866 aaKnown RBP10.69□□□□□ -0.7
VPS25-202ENST00000589219 GTF3C4Q9UKN8 822 aa10.69□□□□□ -0.7
VPS25-202ENST00000589219 AGO2Q9UKV8 859 aaKnown RBP10.69□□□□□ -0.7
VPS25-202ENST00000589219 ZMYND8Q9ULU4 1186 aaPredicted RBP10.69□□□□□ -0.7
VPS25-202ENST00000589219 SZT2Q5T011 3432 aa10.68□□□□□ -0.7
VPS25-202ENST00000589219 DNAH12Q6ZR08 3092 aa10.68□□□□□ -0.7
VPS25-202ENST00000589219 GOLGA6L10A0A0M3HER8 536 aa10.68□□□□□ -0.7
VPS25-202ENST00000589219 POLR3GO15318 223 aaPredicted RBP10.68□□□□□ -0.7
VPS25-202ENST00000589219 DDX3YO15523 660 aaKnown RBP10.68□□□□□ -0.7
VPS25-202ENST00000589219 MAFO75444 373 aaPredicted RBP10.68□□□□□ -0.7
VPS25-202ENST00000589219 MYBL2P10244 700 aa10.68□□□□□ -0.7
VPS25-202ENST00000589219 DLATP10515 647 aaKnown RBP10.68□□□□□ -0.7
VPS25-202ENST00000589219 ABCB4P21439 1286 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms