RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 RNF168Q8IYW5 571 aaPredicted RBP12.64□□□□□ -0.39
RFX1-204ENST00000588885 LINC00301Q8NCQ3 95 aa12.64□□□□□ -0.39
RFX1-204ENST00000588885 SPATA32Q96LK8 384 aa12.64□□□□□ -0.39
RFX1-204ENST00000588885 RIPOR3Q96MK2 946 aa12.64□□□□□ -0.39
RFX1-204ENST00000588885 ACAP3Q96P50 834 aa12.64□□□□□ -0.39
RFX1-204ENST00000588885 PPP1R10Q96QC0 940 aaKnown RBP12.64□□□□□ -0.39
RFX1-204ENST00000588885 RXFP1Q9HBX9 757 aa12.64□□□□□ -0.39
RFX1-204ENST00000588885 MAN1C1Q9NR34 630 aa12.64□□□□□ -0.39
RFX1-204ENST00000588885 CHST7Q9NS84 486 aa12.64□□□□□ -0.39
RFX1-204ENST00000588885 KCND2Q9NZV8 630 aa12.64□□□□□ -0.39
RFX1-204ENST00000588885 CFAP45Q9UL16 551 aa12.64□□□□□ -0.39
RFX1-204ENST00000588885 ARIH1Q9Y4X5 557 aaPredicted RBP12.64□□□□□ -0.39
RFX1-204ENST00000588885 SF3B1O75533 1304 aaKnown RBP eCLIP12.63□□□□□ -0.39
RFX1-204ENST00000588885 K7ENM7 598 aa12.63□□□□□ -0.39
RFX1-204ENST00000588885 ABLIM1O14639 778 aa12.63□□□□□ -0.39
RFX1-204ENST00000588885 GADD45BO75293 160 aaPredicted RBP12.63□□□□□ -0.39
RFX1-204ENST00000588885 TBCAO75347 108 aaKnown RBP12.63□□□□□ -0.39
RFX1-204ENST00000588885 PRPF40AO75400 957 aaKnown RBP12.63□□□□□ -0.39
RFX1-204ENST00000588885 TOM1L1O75674 476 aa12.63□□□□□ -0.39
RFX1-204ENST00000588885 B3GAT3O94766 335 aa12.63□□□□□ -0.39
RFX1-204ENST00000588885 GLUD1P00367 558 aa12.63□□□□□ -0.39
RFX1-204ENST00000588885 PROZP22891 400 aa12.63□□□□□ -0.39
RFX1-204ENST00000588885 NMT1P30419 496 aaKnown RBP12.63□□□□□ -0.39
RFX1-204ENST00000588885 MTHFRP42898 656 aa12.63□□□□□ -0.39
RFX1-204ENST00000588885 SOX4Q06945 474 aaPredicted RBP12.63□□□□□ -0.39
RFX1-204ENST00000588885 DYMQ7RTS9 669 aa12.63□□□□□ -0.39
RFX1-204ENST00000588885 TMEM130Q8N3G9 435 aa12.63□□□□□ -0.39
RFX1-204ENST00000588885 LARP4BQ92615 738 aaKnown RBP12.63□□□□□ -0.39
RFX1-204ENST00000588885 C18orf25Q96B23 403 aaPredicted RBP12.63□□□□□ -0.39
RFX1-204ENST00000588885 MFSD14AQ96MC6 490 aa12.63□□□□□ -0.39
RFX1-204ENST00000588885 ZMAT2Q96NC0 199 aaKnown RBP12.63□□□□□ -0.39
RFX1-204ENST00000588885 TTPALQ9BTX7 342 aa12.63□□□□□ -0.39
RFX1-204ENST00000588885 CCSER1Q9C0I3 900 aa12.63□□□□□ -0.39
RFX1-204ENST00000588885 SCAND2PQ9GZW5 306 aaPredicted RBP12.63□□□□□ -0.39
RFX1-204ENST00000588885 PARVGQ9HBI0 331 aa12.63□□□□□ -0.39
RFX1-204ENST00000588885 TOPORSQ9NS56 1045 aaPredicted RBP12.63□□□□□ -0.39
RFX1-204ENST00000588885 LMBRD1Q9NUN5 540 aa12.63□□□□□ -0.39
RFX1-204ENST00000588885 LARSQ9P2J5 1176 aaKnown RBP12.63□□□□□ -0.39
RFX1-204ENST00000588885 KCNG1Q9UIX4 513 aa12.63□□□□□ -0.39
RFX1-204ENST00000588885 SRPRBQ9Y5M8 271 aaKnown RBP12.63□□□□□ -0.39
RFX1-204ENST00000588885 ZMYM2Q9UBW7 1377 aa12.63□□□□□ -0.39
RFX1-204ENST00000588885 CCDC195A0A1B0GUA6 201 aa12.62□□□□□ -0.39
RFX1-204ENST00000588885 C2CD4DB7Z1M9 353 aa12.62□□□□□ -0.39
RFX1-204ENST00000588885 CLDN3O15551 220 aa12.62□□□□□ -0.39
RFX1-204ENST00000588885 MEFVO15553 781 aaPredicted RBP12.62□□□□□ -0.39
RFX1-204ENST00000588885 TGM5O43548 720 aa12.62□□□□□ -0.39
RFX1-204ENST00000588885 TRAK2O60296 914 aa12.62□□□□□ -0.39
RFX1-204ENST00000588885 RFPL2O75678 378 aa12.62□□□□□ -0.39
RFX1-204ENST00000588885 LIG4P49917 911 aa12.62□□□□□ -0.39
RFX1-204ENST00000588885 NCKAP1LP55160 1127 aa12.62□□□□□ -0.39
RFX1-204ENST00000588885 SPAG1Q07617 926 aa12.62□□□□□ -0.39
RFX1-204ENST00000588885 NOLC1Q14978 699 aaKnown RBP eCLIP12.62□□□□□ -0.39
RFX1-204ENST00000588885 SLC39A14Q15043 492 aa12.62□□□□□ -0.39
RFX1-204ENST00000588885 HERC4Q5GLZ8 1057 aaPredicted RBP12.62□□□□□ -0.39
RFX1-204ENST00000588885 RRAGBQ5VZM2 374 aa12.62□□□□□ -0.39
RFX1-204ENST00000588885 DCLRE1AQ6PJP8 1040 aa12.62□□□□□ -0.39
RFX1-204ENST00000588885 CD300LGQ6UXG3 332 aa12.62□□□□□ -0.39
RFX1-204ENST00000588885 ALKAL1Q6UXT8 129 aa12.62□□□□□ -0.39
RFX1-204ENST00000588885 KRI1Q8N9T8 703 aaKnown RBP12.62□□□□□ -0.39
RFX1-204ENST00000588885 SNX27Q96L92 541 aa12.62□□□□□ -0.39
RFX1-204ENST00000588885 NECTIN4Q96NY8 510 aa12.62□□□□□ -0.39
RFX1-204ENST00000588885 HAPLN2Q9GZV7 340 aa12.62□□□□□ -0.39
RFX1-204ENST00000588885 SFXN1Q9H9B4 322 aa12.62□□□□□ -0.39
RFX1-204ENST00000588885 CCDC39Q9UFE4 941 aa12.62□□□□□ -0.39
RFX1-204ENST00000588885 LIMD1Q9UGP4 676 aa12.62□□□□□ -0.39
RFX1-204ENST00000588885 ODF2LQ9ULJ1 636 aa12.62□□□□□ -0.39
RFX1-204ENST00000588885 TBX20Q9UMR3 447 aa12.62□□□□□ -0.39
RFX1-204ENST00000588885 TECTAO75443 2155 aa12.62□□□□□ -0.39
RFX1-204ENST00000588885 TULP1O00294 542 aaPredicted RBP12.61□□□□□ -0.39
RFX1-204ENST00000588885 SPTLC2O15270 562 aa12.61□□□□□ -0.39
RFX1-204ENST00000588885 ADAM12O43184 909 aa12.61□□□□□ -0.39
RFX1-204ENST00000588885 BRCC3P46736 316 aa12.61□□□□□ -0.39
RFX1-204ENST00000588885 MMRN1Q13201 1228 aa12.61□□□□□ -0.39
RFX1-204ENST00000588885 PSMD5Q16401 504 aa12.61□□□□□ -0.39
RFX1-204ENST00000588885 UPP1Q16831 310 aa12.61□□□□□ -0.39
RFX1-204ENST00000588885 SLC10A6Q3KNW5 377 aa12.61□□□□□ -0.39
RFX1-204ENST00000588885 ZC2HC1CQ53FD0 456 aaPredicted RBP12.61□□□□□ -0.39
RFX1-204ENST00000588885 ZBTB41Q5SVQ8 909 aa12.61□□□□□ -0.39
RFX1-204ENST00000588885 GPR149Q86SP6 731 aa12.61□□□□□ -0.39
RFX1-204ENST00000588885 SUGP1Q8IWZ8 645 aaKnown RBP12.61□□□□□ -0.39
RFX1-204ENST00000588885 PDILTQ8N807 584 aa12.61□□□□□ -0.39
RFX1-204ENST00000588885 C3orf58Q8NDZ4 430 aa12.61□□□□□ -0.39
RFX1-204ENST00000588885 LNX1Q8TBB1 728 aaPredicted RBP12.61□□□□□ -0.39
RFX1-204ENST00000588885 KCNG4Q8TDN1 519 aa12.61□□□□□ -0.39
RFX1-204ENST00000588885 EDAQ92838 391 aa12.61□□□□□ -0.39
RFX1-204ENST00000588885 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.61□□□□□ -0.39
RFX1-204ENST00000588885 TBC1D7Q9P0N9 293 aa12.61□□□□□ -0.39
RFX1-204ENST00000588885 RCOR1Q9UKL0 485 aa12.61□□□□□ -0.39
RFX1-204ENST00000588885 NR2E1Q9Y466 385 aa12.61□□□□□ -0.39
RFX1-204ENST00000588885 A0A087X0B3 334 aa12.6□□□□□ -0.39
RFX1-204ENST00000588885 MYMKA6NI61 221 aa12.6□□□□□ -0.39
RFX1-204ENST00000588885 H0YCG3 227 aa12.6□□□□□ -0.39
RFX1-204ENST00000588885 PODXLO00592 558 aa12.6□□□□□ -0.39
RFX1-204ENST00000588885 HNRNPDLO14979 420 aaKnown RBP12.6□□□□□ -0.39
RFX1-204ENST00000588885 ASGR2P07307 311 aa12.6□□□□□ -0.39
RFX1-204ENST00000588885 CXCL8P10145 99 aa12.6□□□□□ -0.39
RFX1-204ENST00000588885 KCNE1P15382 129 aa12.6□□□□□ -0.39
RFX1-204ENST00000588885 TKTP29401 623 aaKnown RBP12.6□□□□□ -0.39
RFX1-204ENST00000588885 TXLNAP40222 546 aa12.6□□□□□ -0.39
RFX1-204ENST00000588885 TNFSF9P41273 254 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms