RNA–Protein interactions for RNA: ENST00000588720.1

BCAS3-220, Transcript of BCAS3, microtubule associated cell migration factor, humanhuman

Gene BCAS3, Length 4,556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3-220ENST00000588720 HUNKP57058 714 aa12.21□□□□□ -0.45
BCAS3-220ENST00000588720 SF3A3Q12874 501 aaKnown RBP eCLIP12.21□□□□□ -0.45
BCAS3-220ENST00000588720 LRRC55Q6ZSA7 311 aa12.21□□□□□ -0.45
BCAS3-220ENST00000588720 GLIS3Q8NEA6 775 aa12.21□□□□□ -0.45
BCAS3-220ENST00000588720 RUBCNQ92622 972 aa12.21□□□□□ -0.45
BCAS3-220ENST00000588720 ANAPC5Q9UJX4 755 aa12.21□□□□□ -0.45
BCAS3-220ENST00000588720 MCF2LO15068 1137 aa12.21□□□□□ -0.45
BCAS3-220ENST00000588720 VSNL1P62760 191 aa12.21□□□□□ -0.45
BCAS3-220ENST00000588720 USP50Q70EL3 339 aaPredicted RBP12.21□□□□□ -0.45
BCAS3-220ENST00000588720 PDCD7Q8N8D1 485 aaKnown RBP12.21□□□□□ -0.45
BCAS3-220ENST00000588720 RNPC3Q96LT9 517 aaKnown RBP12.21□□□□□ -0.45
BCAS3-220ENST00000588720 ASCC2Q9H1I8 757 aaPredicted RBP12.21□□□□□ -0.45
BCAS3-220ENST00000588720 IP6K2Q9UHH9 426 aa12.21□□□□□ -0.45
BCAS3-220ENST00000588720 FOXN3O00409 490 aaPredicted RBP12.21□□□□□ -0.46
BCAS3-220ENST00000588720 CHRNA3P32297 505 aa12.21□□□□□ -0.46
BCAS3-220ENST00000588720 PLA2G4AP47712 749 aa12.21□□□□□ -0.46
BCAS3-220ENST00000588720 ALDH5A1P51649 535 aaPredicted RBP12.21□□□□□ -0.46
BCAS3-220ENST00000588720 NOP14P78316 857 aaKnown RBP12.21□□□□□ -0.46
BCAS3-220ENST00000588720 MEA1Q16626 185 aa12.21□□□□□ -0.46
BCAS3-220ENST00000588720 MFSD14CQ5VZR4 134 aa12.21□□□□□ -0.46
BCAS3-220ENST00000588720 RHOT1Q8IXI2 618 aa12.21□□□□□ -0.46
BCAS3-220ENST00000588720 CCDC197Q8NCU1 140 aa12.21□□□□□ -0.46
BCAS3-220ENST00000588720 TRPM4Q8TD43 1214 aa12.21□□□□□ -0.46
BCAS3-220ENST00000588720 KIF12Q96FN5 646 aa12.21□□□□□ -0.46
BCAS3-220ENST00000588720 FHDC1Q9C0D6 1143 aaPredicted RBP12.21□□□□□ -0.46
BCAS3-220ENST00000588720 CCDC68Q9H2F9 335 aa12.21□□□□□ -0.46
BCAS3-220ENST00000588720 DONSONQ9NYP3 566 aa12.21□□□□□ -0.46
BCAS3-220ENST00000588720 AIPL1Q9NZN9 384 aa12.21□□□□□ -0.46
BCAS3-220ENST00000588720 HSD17B4P51659 736 aa12.2□□□□□ -0.46
BCAS3-220ENST00000588720 CASC4Q6P4E1 433 aa12.2□□□□□ -0.46
BCAS3-220ENST00000588720 VPS52Q8N1B4 723 aa12.2□□□□□ -0.46
BCAS3-220ENST00000588720 CENPKQ9BS16 269 aa12.2□□□□□ -0.46
BCAS3-220ENST00000588720 PARVAQ9NVD7 372 aa12.2□□□□□ -0.46
BCAS3-220ENST00000588720 CYP39A1Q9NYL5 469 aa12.2□□□□□ -0.46
BCAS3-220ENST00000588720 PLCH1Q4KWH8 1693 aa12.2□□□□□ -0.46
BCAS3-220ENST00000588720 M0R2N6 131 aa12.2□□□□□ -0.46
BCAS3-220ENST00000588720 IL18RAPO95256 599 aa12.2□□□□□ -0.46
BCAS3-220ENST00000588720 ZFXP17010 805 aaPredicted RBP12.2□□□□□ -0.46
BCAS3-220ENST00000588720 SLC1A1P43005 524 aa12.2□□□□□ -0.46
BCAS3-220ENST00000588720 ABI1Q8IZP0 508 aa12.2□□□□□ -0.46
BCAS3-220ENST00000588720 RBBP8NLQ8NC74 664 aaPredicted RBP12.2□□□□□ -0.46
BCAS3-220ENST00000588720 PRPF31Q8WWY3 499 aaKnown RBP12.2□□□□□ -0.46
BCAS3-220ENST00000588720 KLRG1Q96E93 195 aa12.2□□□□□ -0.46
BCAS3-220ENST00000588720 ITGB4P16144 1822 aa12.2□□□□□ -0.46
BCAS3-220ENST00000588720 HUS1O60921 280 aa12.2□□□□□ -0.46
BCAS3-220ENST00000588720 SUN1O94901 812 aa12.2□□□□□ -0.46
BCAS3-220ENST00000588720 EIF3BP55884 814 aaKnown RBP12.2□□□□□ -0.46
BCAS3-220ENST00000588720 DYNLT1P63172 113 aa12.2□□□□□ -0.46
BCAS3-220ENST00000588720 CNTN2Q02246 1040 aa12.2□□□□□ -0.46
BCAS3-220ENST00000588720 ITIH3Q06033 890 aa12.2□□□□□ -0.46
BCAS3-220ENST00000588720 DGKDQ16760 1214 aa12.2□□□□□ -0.46
BCAS3-220ENST00000588720 ZNF677Q86XU0 584 aa12.2□□□□□ -0.46
BCAS3-220ENST00000588720 PAIP2BQ9ULR5 123 aaKnown RBP12.2□□□□□ -0.46
BCAS3-220ENST00000588720 DUSP10Q9Y6W6 482 aa12.2□□□□□ -0.46
BCAS3-220ENST00000588720 ZC3H11AO75152 810 aaKnown RBP eCLIP12.2□□□□□ -0.46
BCAS3-220ENST00000588720 CASP5P51878 434 aa12.2□□□□□ -0.46
BCAS3-220ENST00000588720 TAP1Q03518 808 aa12.2□□□□□ -0.46
BCAS3-220ENST00000588720 NNTQ13423 1086 aa12.2□□□□□ -0.46
BCAS3-220ENST00000588720 ECM1Q16610 540 aa12.2□□□□□ -0.46
BCAS3-220ENST00000588720 SLC30A5Q8TAD4 765 aa12.2□□□□□ -0.46
BCAS3-220ENST00000588720 LRRC1Q9BTT6 524 aa12.2□□□□□ -0.46
BCAS3-220ENST00000588720 EIF2AQ9BY44 585 aaKnown RBP12.2□□□□□ -0.46
BCAS3-220ENST00000588720 GBA2Q9HCG7 927 aaPredicted RBP12.2□□□□□ -0.46
BCAS3-220ENST00000588720 VAV3Q9UKW4 847 aa12.2□□□□□ -0.46
BCAS3-220ENST00000588720 SNX24Q9Y343 169 aa12.2□□□□□ -0.46
BCAS3-220ENST00000588720 PPME1Q9Y570 386 aa12.2□□□□□ -0.46
BCAS3-220ENST00000588720 ADAMTS7Q9UKP4 1686 aa12.19□□□□□ -0.46
BCAS3-220ENST00000588720 OGTO15294 1046 aa12.19□□□□□ -0.46
BCAS3-220ENST00000588720 TOM1L1O75674 476 aa12.19□□□□□ -0.46
BCAS3-220ENST00000588720 ZNF280AP59817 542 aaPredicted RBP12.19□□□□□ -0.46
BCAS3-220ENST00000588720 PSMC1P62191 440 aaKnown RBP12.19□□□□□ -0.46
BCAS3-220ENST00000588720 RIOX2Q8IUF8 465 aa12.19□□□□□ -0.46
BCAS3-220ENST00000588720 FBXO16Q8IX29 292 aaPredicted RBP12.19□□□□□ -0.46
BCAS3-220ENST00000588720 TTC16Q8NEE8 873 aa12.19□□□□□ -0.46
BCAS3-220ENST00000588720 CDCA5Q96FF9 252 aa12.19□□□□□ -0.46
BCAS3-220ENST00000588720 NACA2Q9H009 215 aa12.19□□□□□ -0.46
BCAS3-220ENST00000588720 NGRNQ9NPE2 291 aaKnown RBP12.19□□□□□ -0.46
BCAS3-220ENST00000588720 SIK3Q9Y2K2 1263 aa12.19□□□□□ -0.46
BCAS3-220ENST00000588720 SYNJ2BP-COX16A0A087WUM0 186 aa12.19□□□□□ -0.46
BCAS3-220ENST00000588720 FAM187AA6NFU0 413 aa12.19□□□□□ -0.46
BCAS3-220ENST00000588720 F8VZ95 297 aa12.19□□□□□ -0.46
BCAS3-220ENST00000588720 M0QYV0 167 aa12.19□□□□□ -0.46
BCAS3-220ENST00000588720 CLTAP09496 248 aa12.19□□□□□ -0.46
BCAS3-220ENST00000588720 RBP5P82980 135 aa12.19□□□□□ -0.46
BCAS3-220ENST00000588720 E2F5Q15329 346 aa12.19□□□□□ -0.46
BCAS3-220ENST00000588720 ZNF484Q5JVG2 852 aa12.19□□□□□ -0.46
BCAS3-220ENST00000588720 HHATQ5VTY9 493 aa12.19□□□□□ -0.46
BCAS3-220ENST00000588720 DSTYKQ6XUX3 929 aa12.19□□□□□ -0.46
BCAS3-220ENST00000588720 TRAPPC11Q7Z392 1133 aa12.19□□□□□ -0.46
BCAS3-220ENST00000588720 SIX6OS1Q8N1H7 587 aa12.19□□□□□ -0.46
BCAS3-220ENST00000588720 IL31RAQ8NI17 732 aa12.19□□□□□ -0.46
BCAS3-220ENST00000588720 PI4K2AQ9BTU6 479 aa12.19□□□□□ -0.46
BCAS3-220ENST00000588720 TAF1DQ9H5J8 278 aaPredicted RBP12.19□□□□□ -0.46
BCAS3-220ENST00000588720 ASNSD1Q9NWL6 643 aa12.19□□□□□ -0.46
BCAS3-220ENST00000588720 COX16Q9P0S2 106 aa12.19□□□□□ -0.46
BCAS3-220ENST00000588720 SIPA1L3O60292 1781 aaPredicted RBP12.19□□□□□ -0.46
BCAS3-220ENST00000588720 ESYT3A0FGR9 886 aa12.19□□□□□ -0.46
BCAS3-220ENST00000588720 FRMD3A2A2Y4 597 aa12.19□□□□□ -0.46
BCAS3-220ENST00000588720 RRN3P2A6NIE6 340 aa12.19□□□□□ -0.46
BCAS3-220ENST00000588720 PRLRP16471 622 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms