RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 ABLIM1O14639 778 aa20.59■□□□□ 0.89
TRIM47-205ENST00000587774 NARSO43776 548 aaKnown RBP20.59■□□□□ 0.89
TRIM47-205ENST00000587774 FGFR3P22607 806 aa20.59■□□□□ 0.89
TRIM47-205ENST00000587774 YARSP54577 528 aaKnown RBP20.59■□□□□ 0.89
TRIM47-205ENST00000587774 LIN9Q5TKA1 542 aa20.59■□□□□ 0.89
TRIM47-205ENST00000587774 PDXDC1Q6P996 788 aa20.59■□□□□ 0.89
TRIM47-205ENST00000587774 CD300LGQ6UXG3 332 aa20.59■□□□□ 0.89
TRIM47-205ENST00000587774 SNX27Q96L92 541 aa20.59■□□□□ 0.89
TRIM47-205ENST00000587774 UROC1Q96N76 676 aa20.59■□□□□ 0.89
TRIM47-205ENST00000587774 PLIN2Q99541 437 aa20.59■□□□□ 0.89
TRIM47-205ENST00000587774 RBM19Q9Y4C8 960 aaKnown RBP20.59■□□□□ 0.89
TRIM47-205ENST00000587774 DENND4CQ5VZ89 1909 aa20.59■□□□□ 0.89
TRIM47-205ENST00000587774 I3L4J1 428 aa20.58■□□□□ 0.89
TRIM47-205ENST00000587774 C8AP07357 584 aa20.58■□□□□ 0.89
TRIM47-205ENST00000587774 MCF2P10911 925 aa20.58■□□□□ 0.89
TRIM47-205ENST00000587774 HARSP12081 509 aaKnown RBP20.58■□□□□ 0.89
TRIM47-205ENST00000587774 TKTP29401 623 aaKnown RBP20.58■□□□□ 0.89
TRIM47-205ENST00000587774 SLC12A3P55017 1021 aa20.58■□□□□ 0.89
TRIM47-205ENST00000587774 XKR4Q5GH76 650 aa20.58■□□□□ 0.89
TRIM47-205ENST00000587774 ASTLQ6HA08 431 aaPredicted RBP20.58■□□□□ 0.89
TRIM47-205ENST00000587774 DCLRE1AQ6PJP8 1040 aa20.58■□□□□ 0.89
TRIM47-205ENST00000587774 MPZL3Q6UWV2 235 aa20.58■□□□□ 0.89
TRIM47-205ENST00000587774 ALKAL1Q6UXT8 129 aa20.58■□□□□ 0.89
TRIM47-205ENST00000587774 SYT2Q8N9I0 419 aaPredicted RBP20.58■□□□□ 0.89
TRIM47-205ENST00000587774 DDX27Q96GQ7 796 aaKnown RBP20.58■□□□□ 0.89
TRIM47-205ENST00000587774 ZMAT2Q96NC0 199 aaKnown RBP20.58■□□□□ 0.89
TRIM47-205ENST00000587774 ANKFY1Q9P2R3 1169 aa20.58■□□□□ 0.89
TRIM47-205ENST00000587774 MTRRQ9UBK8 725 aa20.58■□□□□ 0.89
TRIM47-205ENST00000587774 SMC3Q9UQE7 1217 aa20.58■□□□□ 0.89
TRIM47-205ENST00000587774 FRYLO94915 3013 aa20.58■□□□□ 0.88
TRIM47-205ENST00000587774 H0Y858 1186 aa20.57■□□□□ 0.88
TRIM47-205ENST00000587774 MEFVO15553 781 aaPredicted RBP20.57■□□□□ 0.88
TRIM47-205ENST00000587774 GALR2O43603 387 aaPredicted RBP20.57■□□□□ 0.88
TRIM47-205ENST00000587774 BRCC3P46736 316 aa20.57■□□□□ 0.88
TRIM47-205ENST00000587774 MCM2P49736 904 aa20.57■□□□□ 0.88
TRIM47-205ENST00000587774 NUBP1P53384 320 aa20.57■□□□□ 0.88
TRIM47-205ENST00000587774 TMEM119Q4V9L6 283 aa20.57■□□□□ 0.88
TRIM47-205ENST00000587774 PPM1LQ5SGD2 360 aa20.57■□□□□ 0.88
TRIM47-205ENST00000587774 ARL6IP4Q66PJ3 421 aaKnown RBP20.57■□□□□ 0.88
TRIM47-205ENST00000587774 GRASPQ7Z6J2 395 aaPredicted RBP20.57■□□□□ 0.88
TRIM47-205ENST00000587774 FLCNQ8NFG4 579 aa20.57■□□□□ 0.88
TRIM47-205ENST00000587774 SLC7A14Q8TBB6 771 aa20.57■□□□□ 0.88
TRIM47-205ENST00000587774 CDK5RAP3Q96JB5 506 aa20.57■□□□□ 0.88
TRIM47-205ENST00000587774 ZBTB45Q96K62 511 aaPredicted RBP20.57■□□□□ 0.88
TRIM47-205ENST00000587774 TBC1D32Q96NH3 1257 aa20.57■□□□□ 0.88
TRIM47-205ENST00000587774 NTPCRQ9BSD7 190 aaKnown RBP20.57■□□□□ 0.88
TRIM47-205ENST00000587774 TCHPQ9BT92 498 aa20.57■□□□□ 0.88
TRIM47-205ENST00000587774 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.57■□□□□ 0.881e-6■■□□□ 13
TRIM47-205ENST00000587774 FBXL21Q9UKT6 434 aa20.57■□□□□ 0.88
TRIM47-205ENST00000587774 CDY1Q9Y6F8 540 aa20.57■□□□□ 0.88
TRIM47-205ENST00000587774 NUP210Q8TEM1 1887 aaPredicted RBP20.56■□□□□ 0.88
TRIM47-205ENST00000587774 HNRNPA1P09651 372 aaKnown RBP eCLIP20.56■□□□□ 0.88
TRIM47-205ENST00000587774 PLA2G4BP0C869 781 aa20.56■□□□□ 0.88
TRIM47-205ENST00000587774 LAMP2P13473 410 aa20.56■□□□□ 0.88
TRIM47-205ENST00000587774 PLS3P13797 630 aa20.56■□□□□ 0.88
TRIM47-205ENST00000587774 HOXA9P31269 272 aa20.56■□□□□ 0.88
TRIM47-205ENST00000587774 OR1D2P34982 312 aa20.56■□□□□ 0.88
TRIM47-205ENST00000587774 CLCN5P51795 746 aa20.56■□□□□ 0.88
TRIM47-205ENST00000587774 CACNB1Q02641 598 aaPredicted RBP20.56■□□□□ 0.88
TRIM47-205ENST00000587774 STRN3Q13033 797 aa20.56■□□□□ 0.88
TRIM47-205ENST00000587774 RAB33AQ14088 237 aa20.56■□□□□ 0.88
TRIM47-205ENST00000587774 NOLC1Q14978 699 aaKnown RBP eCLIP20.56■□□□□ 0.88
TRIM47-205ENST00000587774 AXDND1Q5T1B0 1012 aaPredicted RBP20.56■□□□□ 0.88
TRIM47-205ENST00000587774 RSPO2Q6UXX9 243 aaPredicted RBP20.56■□□□□ 0.88
TRIM47-205ENST00000587774 SIX5Q8N196 739 aa20.56■□□□□ 0.88
TRIM47-205ENST00000587774 KCTD17Q8N5Z5 321 aa20.56■□□□□ 0.88
TRIM47-205ENST00000587774 TMEM161BQ8NDZ6 487 aa20.56■□□□□ 0.88
TRIM47-205ENST00000587774 SPIRE2Q8WWL2 714 aa20.56■□□□□ 0.88
TRIM47-205ENST00000587774 ACAP3Q96P50 834 aa20.56■□□□□ 0.88
TRIM47-205ENST00000587774 SLC38A7Q9NVC3 462 aa20.56■□□□□ 0.88
TRIM47-205ENST00000587774 CNTN3Q9P232 1028 aa20.56■□□□□ 0.88
TRIM47-205ENST00000587774 COL4A2P08572 1712 aa20.56■□□□□ 0.88
TRIM47-205ENST00000587774 ZNF638Q14966 1978 aaKnown RBP20.55■□□□□ 0.88
TRIM47-205ENST00000587774 NPHP3-ACAD11A0A0J9YXS1 232 aa20.55■□□□□ 0.88
TRIM47-205ENST00000587774 PODXLO00592 558 aa20.55■□□□□ 0.88
TRIM47-205ENST00000587774 CCL16O15467 120 aa20.55■□□□□ 0.88
TRIM47-205ENST00000587774 TRAPPC3O43617 180 aa20.55■□□□□ 0.88
TRIM47-205ENST00000587774 CFHP08603 1231 aa20.55■□□□□ 0.88
TRIM47-205ENST00000587774 MAPTP10636 758 aaKnown RBP20.55■□□□□ 0.88
TRIM47-205ENST00000587774 KCNE1P15382 129 aa20.55■□□□□ 0.88
TRIM47-205ENST00000587774 NPR3P17342 541 aa20.55■□□□□ 0.88
TRIM47-205ENST00000587774 FSHRP23945 695 aa20.55■□□□□ 0.88
TRIM47-205ENST00000587774 NTHL1P78549 312 aa20.55■□□□□ 0.88
TRIM47-205ENST00000587774 HTR4Q13639 388 aa20.55■□□□□ 0.88
TRIM47-205ENST00000587774 ST13P5Q8NFI4 369 aaPredicted RBP20.55■□□□□ 0.88
TRIM47-205ENST00000587774 ATOH1Q92858 354 aaPredicted RBP20.55■□□□□ 0.88
TRIM47-205ENST00000587774 KCND2Q9NZV8 630 aa20.55■□□□□ 0.88
TRIM47-205ENST00000587774 OBSL1O75147 1896 aa20.55■□□□□ 0.88
TRIM47-205ENST00000587774 KIF26AQ9ULI4 1882 aaPredicted RBP20.55■□□□□ 0.88
TRIM47-205ENST00000587774 CACNA1IQ9P0X4 2223 aa20.55■□□□□ 0.88
TRIM47-205ENST00000587774 TOM1L1O75674 476 aa20.54■□□□□ 0.88
TRIM47-205ENST00000587774 AOC1P19801 751 aa20.54■□□□□ 0.88
TRIM47-205ENST00000587774 SMTNP53814 917 aa20.54■□□□□ 0.88
TRIM47-205ENST00000587774 SEZ6Q53EL9 994 aa20.54■□□□□ 0.88
TRIM47-205ENST00000587774 ARSHQ5FYA8 562 aa20.54■□□□□ 0.88
TRIM47-205ENST00000587774 LARP1BQ659C4 914 aaKnown RBP20.54■□□□□ 0.88
TRIM47-205ENST00000587774 ANKS3Q6ZW76 656 aa20.54■□□□□ 0.88
TRIM47-205ENST00000587774 SLC44A3Q8N4M1 653 aa20.54■□□□□ 0.88
TRIM47-205ENST00000587774 LRRC15Q8TF66 581 aa20.54■□□□□ 0.88
TRIM47-205ENST00000587774 NXPE3Q969Y0 559 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms