RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 TSPEARQ8WU66 669 aa5.77□□□□□ -1.49
VMP1-205ENST00000587470 TGFBRAP1Q8WUH2 860 aa5.77□□□□□ -1.49
VMP1-205ENST00000587470 BCO1Q9HAY6 547 aa5.77□□□□□ -1.49
VMP1-205ENST00000587470 IFT122Q9HBG6 1241 aa5.77□□□□□ -1.49
VMP1-205ENST00000587470 VTA1Q9NP79 307 aa5.77□□□□□ -1.49
VMP1-205ENST00000587470 ARHGEF12Q9NZN5 1544 aa5.77□□□□□ -1.49
VMP1-205ENST00000587470 PTPRKQ15262 1439 aa5.76□□□□□ -1.49
VMP1-205ENST00000587470 TRAPPC8Q9Y2L5 1435 aa5.76□□□□□ -1.49
VMP1-205ENST00000587470 ZFYVE16Q7Z3T8 1539 aa5.76□□□□□ -1.49
VMP1-205ENST00000587470 LPXNO60711 386 aa5.76□□□□□ -1.49
VMP1-205ENST00000587470 NCR1O76036 304 aa5.76□□□□□ -1.49
VMP1-205ENST00000587470 NDUFA10O95299 355 aa5.76□□□□□ -1.49
VMP1-205ENST00000587470 EYA4O95677 639 aa5.76□□□□□ -1.49
VMP1-205ENST00000587470 SPATA31D3P0C874 917 aa5.76□□□□□ -1.49
VMP1-205ENST00000587470 BMPR1AP36894 532 aa5.76□□□□□ -1.49
VMP1-205ENST00000587470 CLRN1P58418 232 aa5.76□□□□□ -1.49
VMP1-205ENST00000587470 ANO4Q32M45 955 aa5.76□□□□□ -1.49
VMP1-205ENST00000587470 FAM102AQ5T9C2 384 aaPredicted RBP5.76□□□□□ -1.49
VMP1-205ENST00000587470 SPATA31D4Q6ZUB0 917 aa5.76□□□□□ -1.49
VMP1-205ENST00000587470 ZNF572Q7Z3I7 529 aaPredicted RBP5.76□□□□□ -1.49
VMP1-205ENST00000587470 ARHGEF19Q8IW93 802 aa5.76□□□□□ -1.49
VMP1-205ENST00000587470 DNAJC10Q8IXB1 793 aa5.76□□□□□ -1.49
VMP1-205ENST00000587470 QRSL1Q9H0R6 528 aaKnown RBP5.76□□□□□ -1.49
VMP1-205ENST00000587470 SERHL2Q9H4I8 314 aa5.76□□□□□ -1.49
VMP1-205ENST00000587470 GREM2Q9H772 168 aa5.76□□□□□ -1.49
VMP1-205ENST00000587470 CYP4F11Q9HBI6 524 aa5.76□□□□□ -1.49
VMP1-205ENST00000587470 DKK2Q9UBU2 259 aa5.76□□□□□ -1.49
VMP1-205ENST00000587470 SCOCQ9UIL1 159 aa5.76□□□□□ -1.49
VMP1-205ENST00000587470 RAPGEF6Q8TEU7 1601 aa5.76□□□□□ -1.49
VMP1-205ENST00000587470 CASKIN1Q8WXD9 1431 aa5.75□□□□□ -1.49
VMP1-205ENST00000587470 RICTORQ6R327 1708 aa5.75□□□□□ -1.49
VMP1-205ENST00000587470 GRID2IPA4D2P6 1211 aa5.75□□□□□ -1.49
VMP1-205ENST00000587470 PLEKHD1A6NEE1 506 aa5.75□□□□□ -1.49
VMP1-205ENST00000587470 ZNF185O15231 689 aa5.75□□□□□ -1.49
VMP1-205ENST00000587470 ADCY6O43306 1168 aa5.75□□□□□ -1.49
VMP1-205ENST00000587470 HLA-DOAP06340 250 aa5.75□□□□□ -1.49
VMP1-205ENST00000587470 SNRPA1P09661 255 aaKnown RBP5.75□□□□□ -1.49
VMP1-205ENST00000587470 PROZP22891 400 aa5.75□□□□□ -1.49
VMP1-205ENST00000587470 ECHS1P30084 290 aa5.75□□□□□ -1.49
VMP1-205ENST00000587470 NANOS3P60323 173 aaKnown RBP5.75□□□□□ -1.49
VMP1-205ENST00000587470 CCT2P78371 535 aaKnown RBP5.75□□□□□ -1.49
VMP1-205ENST00000587470 TMPRSS15P98073 1019 aa5.75□□□□□ -1.49
VMP1-205ENST00000587470 BEAN1Q3B7T3 259 aa5.75□□□□□ -1.49
VMP1-205ENST00000587470 PDCD4Q53EL6 469 aaKnown RBP5.75□□□□□ -1.49
VMP1-205ENST00000587470 MUM1L1Q5H9M0 696 aa5.75□□□□□ -1.49
VMP1-205ENST00000587470 ATXN7L2Q5T6C5 722 aaPredicted RBP5.75□□□□□ -1.49
VMP1-205ENST00000587470 Q6ZVL8 140 aa5.75□□□□□ -1.49
VMP1-205ENST00000587470 KRT26Q7Z3Y9 468 aa5.75□□□□□ -1.49
VMP1-205ENST00000587470 TRMT2AQ8IZ69 625 aaKnown RBP5.75□□□□□ -1.49
VMP1-205ENST00000587470 RNF169Q8NCN4 708 aa5.75□□□□□ -1.49
VMP1-205ENST00000587470 REPS2Q8NFH8 660 aa5.75□□□□□ -1.49
VMP1-205ENST00000587470 SLC35B2Q8TB61 432 aa5.75□□□□□ -1.49
VMP1-205ENST00000587470 TOR3AQ9H497 397 aa5.75□□□□□ -1.49
VMP1-205ENST00000587470 RBM12Q9NTZ6 932 aaKnown RBP5.75□□□□□ -1.49
VMP1-205ENST00000587470 CAMSAP1Q5T5Y3 1602 aa5.74□□□□□ -1.49
VMP1-205ENST00000587470 SIGLEC1Q9BZZ2 1709 aa5.74□□□□□ -1.49
VMP1-205ENST00000587470 DRGXA6NNA5 263 aa5.74□□□□□ -1.49
VMP1-205ENST00000587470 CXorf49A8MYA2 514 aaPredicted RBP5.74□□□□□ -1.49
VMP1-205ENST00000587470 PPFIA2O75334 1257 aa5.74□□□□□ -1.49
VMP1-205ENST00000587470 VIL1P09327 827 aaKnown RBP5.74□□□□□ -1.49
VMP1-205ENST00000587470 ZEB1P37275 1124 aaPredicted RBP5.74□□□□□ -1.49
VMP1-205ENST00000587470 SP140Q13342 867 aa5.74□□□□□ -1.49
VMP1-205ENST00000587470 METRNLQ641Q3 311 aa5.74□□□□□ -1.49
VMP1-205ENST00000587470 ZNF575Q86XF7 245 aa5.74□□□□□ -1.49
VMP1-205ENST00000587470 AHCYL2Q96HN2 611 aaKnown RBP5.74□□□□□ -1.49
VMP1-205ENST00000587470 UHRF1Q96T88 793 aaPredicted RBP5.74□□□□□ -1.49
VMP1-205ENST00000587470 TEX101Q9BY14 249 aa5.74□□□□□ -1.49
VMP1-205ENST00000587470 ACE2Q9BYF1 805 aaPredicted RBP5.74□□□□□ -1.49
VMP1-205ENST00000587470 C14orf119Q9NWQ9 140 aa5.74□□□□□ -1.49
VMP1-205ENST00000587470 ANKFY1Q9P2R3 1169 aa5.74□□□□□ -1.49
VMP1-205ENST00000587470 ZBTB21Q9ULJ3 1066 aa5.74□□□□□ -1.49
VMP1-205ENST00000587470 USP15Q9Y4E8 981 aaPredicted RBP5.74□□□□□ -1.49
VMP1-205ENST00000587470 ATP10AO60312 1499 aa5.74□□□□□ -1.49
VMP1-205ENST00000587470 CDK13Q14004 1512 aaKnown RBP5.74□□□□□ -1.49
VMP1-205ENST00000587470 ZMYM4Q5VZL5 1548 aa5.74□□□□□ -1.49
VMP1-205ENST00000587470 ATRNL1Q5VV63 1379 aa5.73□□□□□ -1.49
VMP1-205ENST00000587470 IL2RBP14784 551 aa5.73□□□□□ -1.49
VMP1-205ENST00000587470 ALOX15P16050 662 aaPredicted RBP5.73□□□□□ -1.49
VMP1-205ENST00000587470 BMP5P22003 454 aa5.73□□□□□ -1.49
VMP1-205ENST00000587470 CNGA1P29973 690 aa5.73□□□□□ -1.49
VMP1-205ENST00000587470 SREBF1P36956 1147 aa5.73□□□□□ -1.49
VMP1-205ENST00000587470 GPR3P46089 330 aa5.73□□□□□ -1.49
VMP1-205ENST00000587470 SLC5A3P53794 718 aa5.73□□□□□ -1.49
VMP1-205ENST00000587470 USP14P54578 494 aa5.73□□□□□ -1.49
VMP1-205ENST00000587470 PER3P56645 1201 aa5.73□□□□□ -1.49
VMP1-205ENST00000587470 RRP12Q5JTH9 1297 aaKnown RBP5.73□□□□□ -1.49
VMP1-205ENST00000587470 TOR2AQ5JU69 321 aa5.73□□□□□ -1.49
VMP1-205ENST00000587470 HECTD2Q5U5R9 776 aa5.73□□□□□ -1.49
VMP1-205ENST00000587470 RNF219Q5W0B1 726 aaPredicted RBP5.73□□□□□ -1.49
VMP1-205ENST00000587470 LCORLQ8N3X6 602 aa5.73□□□□□ -1.49
VMP1-205ENST00000587470 GPR150Q8NGU9 434 aa5.73□□□□□ -1.49
VMP1-205ENST00000587470 WDR66Q8TBY9 1149 aa5.73□□□□□ -1.49
VMP1-205ENST00000587470 WDR11Q9BZH6 1224 aa5.73□□□□□ -1.49
VMP1-205ENST00000587470 TMX1Q9H3N1 280 aa5.73□□□□□ -1.49
VMP1-205ENST00000587470 MOCS1Q9NZB8 636 aa5.73□□□□□ -1.49
VMP1-205ENST00000587470 FPGT-TNNI3KV9GXZ4 949 aa5.73□□□□□ -1.49
VMP1-205ENST00000587470 C9orf84Q5VXU9 1444 aa5.73□□□□□ -1.49
VMP1-205ENST00000587470 PNPLA7Q6ZV29 1317 aa5.73□□□□□ -1.49
VMP1-205ENST00000587470 GPR39O43194 453 aa5.72□□□□□ -1.49
VMP1-205ENST00000587470 ADRA1BP35368 520 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms