RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 CLCN5P51795 746 aa8.6□□□□□ -1.03
VMP1-204ENST00000587259 JAK3P52333 1124 aa8.6□□□□□ -1.03
VMP1-204ENST00000587259 POLGP54098 1239 aaPredicted RBP8.6□□□□□ -1.03
VMP1-204ENST00000587259 PNOCQ13519 176 aa8.6□□□□□ -1.03
VMP1-204ENST00000587259 TDGQ13569 410 aa8.6□□□□□ -1.03
VMP1-204ENST00000587259 STIM1Q13586 685 aa8.6□□□□□ -1.03
VMP1-204ENST00000587259 IQCB1Q15051 598 aa8.6□□□□□ -1.03
VMP1-204ENST00000587259 E2F4Q16254 413 aa8.6□□□□□ -1.03
VMP1-204ENST00000587259 DPCR1Q3MIW9 517 aa8.6□□□□□ -1.03
VMP1-204ENST00000587259 Q4G0T1 1027 aa8.6□□□□□ -1.03
VMP1-204ENST00000587259 LUZP1Q86V48 1076 aa8.6□□□□□ -1.03
VMP1-204ENST00000587259 PALB2Q86YC2 1186 aa8.6□□□□□ -1.03
VMP1-204ENST00000587259 CCDC105Q8IYK2 499 aa8.6□□□□□ -1.03
VMP1-204ENST00000587259 KIAA2013Q8IYS2 634 aa8.6□□□□□ -1.03
VMP1-204ENST00000587259 MRFAP1L1Q96HT8 127 aa8.6□□□□□ -1.03
VMP1-204ENST00000587259 CPB2Q96IY4 423 aa8.6□□□□□ -1.03
VMP1-204ENST00000587259 FAM20AQ96MK3 541 aa8.6□□□□□ -1.03
VMP1-204ENST00000587259 MBOAT7Q96N66 472 aa8.6□□□□□ -1.03
VMP1-204ENST00000587259 MTMR9Q96QG7 549 aa8.6□□□□□ -1.03
VMP1-204ENST00000587259 RIT2Q99578 217 aa8.6□□□□□ -1.03
VMP1-204ENST00000587259 APOL6Q9BWW8 343 aa8.6□□□□□ -1.03
VMP1-204ENST00000587259 EIF2AQ9BY44 585 aaKnown RBP8.6□□□□□ -1.03
VMP1-204ENST00000587259 NIFKQ9BYG3 293 aaKnown RBP8.6□□□□□ -1.03
VMP1-204ENST00000587259 TRIM5Q9C035 493 aa8.6□□□□□ -1.03
VMP1-204ENST00000587259 MIOSQ9NXC5 875 aa8.6□□□□□ -1.03
VMP1-204ENST00000587259 DUSP12Q9UNI6 340 aa8.6□□□□□ -1.03
VMP1-204ENST00000587259 USTQ9Y2C2 406 aa8.6□□□□□ -1.03
VMP1-204ENST00000587259 PCDHA5Q9Y5H7 936 aa8.6□□□□□ -1.03
VMP1-204ENST00000587259 IRAK3Q9Y616 596 aa8.6□□□□□ -1.03
VMP1-204ENST00000587259 WNT7AO00755 349 aa8.59□□□□□ -1.03
VMP1-204ENST00000587259 INPPL1O15357 1258 aa8.59□□□□□ -1.03
VMP1-204ENST00000587259 TEX28O15482 410 aa8.59□□□□□ -1.03
VMP1-204ENST00000587259 MAFO75444 373 aaPredicted RBP8.59□□□□□ -1.03
VMP1-204ENST00000587259 HOXA11P31270 313 aaPredicted RBP8.59□□□□□ -1.03
VMP1-204ENST00000587259 MLH1P40692 756 aa8.59□□□□□ -1.03
VMP1-204ENST00000587259 OR1G1P47890 313 aa8.59□□□□□ -1.03
VMP1-204ENST00000587259 PLCB2Q00722 1185 aa8.59□□□□□ -1.03
VMP1-204ENST00000587259 DPYDQ12882 1025 aa8.59□□□□□ -1.03
VMP1-204ENST00000587259 MORC3Q14149 939 aa8.59□□□□□ -1.03
VMP1-204ENST00000587259 KCNB1Q14721 858 aa8.59□□□□□ -1.03
VMP1-204ENST00000587259 XKR3Q5GH77 459 aa8.59□□□□□ -1.03
VMP1-204ENST00000587259 B3GNT9Q6UX72 402 aa8.59□□□□□ -1.03
VMP1-204ENST00000587259 C11orf57Q6ZUT1 292 aaPredicted RBP8.59□□□□□ -1.03
VMP1-204ENST00000587259 OTOP3Q7RTS5 596 aa8.59□□□□□ -1.03
VMP1-204ENST00000587259 CDR2LQ86X02 465 aaPredicted RBP8.59□□□□□ -1.03
VMP1-204ENST00000587259 DHX40Q8IX18 779 aaKnown RBP8.59□□□□□ -1.03
VMP1-204ENST00000587259 DCLK2Q8N568 766 aa8.59□□□□□ -1.03
VMP1-204ENST00000587259 AOPEPQ8N6M6 819 aa8.59□□□□□ -1.03
VMP1-204ENST00000587259 SMG8Q8ND04 991 aaKnown RBP8.59□□□□□ -1.03
VMP1-204ENST00000587259 ETNPPLQ8TBG4 499 aa8.59□□□□□ -1.03
VMP1-204ENST00000587259 GPR152Q8TDT2 470 aa8.59□□□□□ -1.03
VMP1-204ENST00000587259 ACSF2Q96CM8 615 aaPredicted RBP8.59□□□□□ -1.03
VMP1-204ENST00000587259 RMDN1Q96DB5 314 aa8.59□□□□□ -1.03
VMP1-204ENST00000587259 PAGE5Q96GU1 130 aa8.59□□□□□ -1.03
VMP1-204ENST00000587259 ZFP42Q96MM3 310 aa8.59□□□□□ -1.03
VMP1-204ENST00000587259 RPP25Q9BUL9 199 aaKnown RBP8.59□□□□□ -1.03
VMP1-204ENST00000587259 EMILIN2Q9BXX0 1053 aa8.59□□□□□ -1.03
VMP1-204ENST00000587259 FOXQ1Q9C009 403 aa8.59□□□□□ -1.03
VMP1-204ENST00000587259 TMEM60Q9H2L4 133 aa8.59□□□□□ -1.03
VMP1-204ENST00000587259 TBC1D17Q9HA65 648 aa8.59□□□□□ -1.03
VMP1-204ENST00000587259 RSAD1Q9HA92 442 aa8.59□□□□□ -1.03
VMP1-204ENST00000587259 CHST12Q9NRB3 414 aa8.59□□□□□ -1.03
VMP1-204ENST00000587259 AGPAT5Q9NUQ2 364 aa8.59□□□□□ -1.03
VMP1-204ENST00000587259 LRWD1Q9UFC0 647 aa8.59□□□□□ -1.03
VMP1-204ENST00000587259 MAN1B1Q9UKM7 699 aa8.59□□□□□ -1.03
VMP1-204ENST00000587259 PCDHA12Q9UN75 941 aa8.59□□□□□ -1.03
VMP1-204ENST00000587259 FAN1Q9Y2M0 1017 aa8.59□□□□□ -1.03
VMP1-204ENST00000587259 CLUHO75153 1309 aa8.58□□□□□ -1.04
VMP1-204ENST00000587259 FRYLO94915 3013 aa8.58□□□□□ -1.04
VMP1-204ENST00000587259 A0A087WWV3 80 aa8.58□□□□□ -1.04
VMP1-204ENST00000587259 TK2O00142 265 aa8.58□□□□□ -1.04
VMP1-204ENST00000587259 NRDCO43847 1150 aa8.58□□□□□ -1.04
VMP1-204ENST00000587259 ZNF623O75123 536 aa8.58□□□□□ -1.04
VMP1-204ENST00000587259 GLULP15104 373 aa8.58□□□□□ -1.04
VMP1-204ENST00000587259 MUTP22033 750 aa8.58□□□□□ -1.04
VMP1-204ENST00000587259 SFNP31947 248 aa8.58□□□□□ -1.04
VMP1-204ENST00000587259 TXKP42681 527 aa8.58□□□□□ -1.04
VMP1-204ENST00000587259 DNM2P50570 870 aa8.58□□□□□ -1.04
VMP1-204ENST00000587259 SCNN1GP51170 649 aa8.58□□□□□ -1.04
VMP1-204ENST00000587259 NTHL1P78549 312 aa8.58□□□□□ -1.04
VMP1-204ENST00000587259 LAMTOR4Q0VGL1 99 aa8.58□□□□□ -1.04
VMP1-204ENST00000587259 BMS1Q14692 1282 aaKnown RBP8.58□□□□□ -1.04
VMP1-204ENST00000587259 ZNF658Q5TYW1 1059 aaPredicted RBP8.58□□□□□ -1.04
VMP1-204ENST00000587259 GET4Q7L5D6 327 aaPredicted RBP8.58□□□□□ -1.04
VMP1-204ENST00000587259 ZNF410Q86VK4 478 aa8.58□□□□□ -1.04
VMP1-204ENST00000587259 ZSCAN30Q86W11 494 aa8.58□□□□□ -1.04
VMP1-204ENST00000587259 COLGALT2Q8IYK4 626 aa8.58□□□□□ -1.04
VMP1-204ENST00000587259 SLC44A3Q8N4M1 653 aa8.58□□□□□ -1.04
VMP1-204ENST00000587259 ANKRD20A12PQ8NF67 263 aa8.58□□□□□ -1.04
VMP1-204ENST00000587259 ENOX1Q8TC92 643 aaKnown RBP8.58□□□□□ -1.04
VMP1-204ENST00000587259 URGCPQ8TCY9 931 aa8.58□□□□□ -1.04
VMP1-204ENST00000587259 PRPF31Q8WWY3 499 aaKnown RBP8.58□□□□□ -1.04
VMP1-204ENST00000587259 SMG7Q92540 1137 aaKnown RBP8.58□□□□□ -1.04
VMP1-204ENST00000587259 ZNF707Q96C28 371 aaPredicted RBP8.58□□□□□ -1.04
VMP1-204ENST00000587259 FAM193BQ96PV7 902 aaPredicted RBP8.58□□□□□ -1.04
VMP1-204ENST00000587259 GAD1Q99259 594 aa8.58□□□□□ -1.04
VMP1-204ENST00000587259 TRAIPQ9BWF2 469 aa8.58□□□□□ -1.04
VMP1-204ENST00000587259 TTC12Q9H892 705 aaPredicted RBP8.58□□□□□ -1.04
VMP1-204ENST00000587259 KCNMB3Q9NPA1 279 aa8.58□□□□□ -1.04
VMP1-204ENST00000587259 MRPL17Q9NRX2 175 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms